Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_21031 Corchorus olitorius HOM05D006661 ORTHO05D008369 9.3e-34 146.4 77 100.0
Thecc.09G051500 Theobroma cacao HOM05D006661 ORTHO05D008369 7.2e-18 93.6 47 95.7
Duzib168G0126 Durio zibethinus HOM05D000575 ORTHO05D008369 4.6e-17 90.9 44 97.7
Gohir.A06G090000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 4.6e-17 90.9 47 93.6
Gohir.D06G089000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 4.6e-17 90.9 47 93.6
Gorai.010G102800 Gossypium raimondii HOM05D006661 ORTHO05D008369 4.6e-17 90.9 47 93.6
Duzib187G1697 Durio zibethinus HOM05D006661 ORTHO05D008369 1.3e-16 89.4 47 91.5
arahy.Tifrunner.gnm1.ann1.KA607S Arachis hypogaea HOM05D006661 ORTHO05D008369 3.0e-16 88.2 47 89.4
arahy.Tifrunner.gnm1.ann1.R5Q5WD Arachis hypogaea HOM05D006661 ORTHO05D008369 3.0e-16 88.2 47 89.4
Atru.chr7.2017 Acer truncatum HOM05D006661 ORTHO05D008369 5.1e-16 87.4 47 89.4
Glyma.13G222200 Glycine max HOM05D006661 ORTHO05D008369 5.1e-16 87.4 47 89.4
Ciclev10009515m.g Citrus clementina HOM05D006661 ORTHO05D008369 1.1e-15 86.3 47 87.2
MD08G1044700 Malus domestica HOM05D006661 ORTHO05D008369 1.1e-15 86.3 44 93.2
Prupe.1G414600 Prunus persica HOM05D006661 ORTHO05D008369 1.1e-15 86.3 44 90.9
Ca_00502_v3 Cicer arietinum L. HOM05D006661 ORTHO05D008369 1.5e-15 85.9 47 85.1
ClCG08G016930 Citrullus lanatus HOM05D006661 ORTHO05D008369 2.5e-15 85.1 44 88.6
CsaV3_2G025680 Cucumis sativus L. HOM05D006661 ORTHO05D008369 2.5e-15 85.1 44 88.6
Manes.16G078200 Manihot esculenta HOM05D006661 ORTHO05D008369 2.5e-15 85.1 47 85.1
TWI34G0500 Tripterygium wilfordii HOM05D006661 ORTHO05D008369 2.5e-15 85.1 47 87.2
Phvul.006G168200 Phaseolus vulgaris HOM05D006661 ORTHO05D008369 3.3e-15 84.7 44 88.6
VMungo0540G1431 Vigna mungo HOM05D006661 ORTHO05D008369 3.3e-15 84.7 44 88.6
CANSAT25G2346 Cannabis sativa HOM05D006661 ORTHO05D008369 4.3e-15 84.3 47 85.1
Lj4g0006609 Lotus japonicus HOM05D006661 ORTHO05D008369 4.3e-15 84.3 47 85.1
Medtr2g018310 Medicago truncatula HOM05D006661 ORTHO05D008369 4.3e-15 84.3 44 86.4
FAN15G2916 Fragaria x ananassa HOM05D006661 ORTHO05D008369 5.7e-15 84.0 44 88.6
FAN20G2753 Fragaria x ananassa HOM05D006661 ORTHO05D008369 5.7e-15 84.0 44 88.6
Psat1g192360 Pisum sativum HOM05D006661 ORTHO05D008369 5.7e-15 84.0 47 83.0
RcHm_v2.0_Chr6g0310531 Rosa chinensis HOM05D006661 ORTHO05D008369 5.7e-15 84.0 44 88.6
Lalb_Chr18g0055101 Lupinus albus HOM05D006661 ORTHO05D008369 7.4e-15 83.6 47 83.0
QL02p001540 Quercus lobata HOM05D006661 ORTHO05D008369 9.7e-15 83.2 47 85.1
FvH4_2g32150 Fragaria vesca HOM05D006661 ORTHO05D008369 1.3e-14 82.8 44 86.4
FAN24G0958 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.3e-14 82.8 44 86.4
Cfa017936 Carpinus fangiana HOM05D006661 ORTHO05D008369 1.6e-14 82.4 47 85.1
CiPaw.16G029900 Carya illinoinensis HOM05D006661 ORTHO05D008369 1.6e-14 82.4 44 88.6
Haze_18212 Corylus avellana HOM05D006661 ORTHO05D008369 1.6e-14 82.4 47 85.1
MELO3C030341.2 Cucumis melo HOM05D006661 ORTHO05D008369 1.6e-14 82.4 44 84.1
MD08G1045300 Malus domestica HOM05D006661 ORTHO05D008369 2.2e-14 82.0 44 88.6
Sed0008959 Sechium edule HOM05D006661 ORTHO05D008369 2.2e-14 82.0 44 86.4
Aqoxy7G01325 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 3.7e-14 81.3 44 84.1
Cpa.g.sc7.195 Carica papaya HOM05D006661 ORTHO05D008369 3.7e-14 81.3 44 88.6
TPR.G20633 Trifolium pratense HOM05D006661 ORTHO05D008369 4.8e-14 80.9 44 84.1
Sp4g05860 Schrenkiella parvula HOM05D006661 ORTHO05D008369 6.3e-14 80.5 47 80.9
Hma1.2p1_0450F.1_g155690 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 8.2e-14 80.1 44 86.4
Hma1.2p1_2451F.1_g322380 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 8.2e-14 80.1 47 83.0
Sabra06G0180400 Salix brachista HOM05D006661 ORTHO05D008369 8.2e-14 80.1 44 86.4
Sabra06G0180500 Salix brachista HOM05D006661 ORTHO05D008369 8.2e-14 80.1 44 86.4
Sabra06G0181100 Salix brachista HOM05D006661 ORTHO05D008369 8.2e-14 80.1 44 86.4
TAR383G0029 Trochodendron aralioides HOM05D006661 ORTHO05D008369 8.2e-14 80.1 44 84.1
BcaC02g08315 Brassica carinata HOM05D006661 ORTHO05D008369 1.4e-13 79.3 44 81.8
A04p20170 Brassica napus HOM05D006661 ORTHO05D008369 1.4e-13 79.3 44 81.8
C04p55870 Brassica napus HOM05D006661 ORTHO05D008369 1.4e-13 79.3 44 81.8
BolC4t27119H Brassica oleracea HOM05D006661 ORTHO05D008369 1.4e-13 79.3 44 81.8
BraA04t17597Z Brassica rapa HOM05D006661 ORTHO05D008369 1.4e-13 79.3 44 81.8
Aa31LG5G9740 Aethionema arabicum HOM05D006661 ORTHO05D008369 1.8e-13 79.0 47 78.7
Lj8A552G6 Lonicera japonica HOM05D006661 ORTHO05D008369 1.8e-13 79.0 44 84.1
PGR031G2394 Punica granatum HOM05D006661 ORTHO05D008369 1.8e-13 79.0 47 80.9
GSVIVG01035347001 Vitis vinifera HOM05D006661 ORTHO05D008369 1.8e-13 79.0 47 80.9
AL4G18030 Arabidopsis lyrata HOM05D006661 ORTHO05D008369 2.4e-13 78.6 47 78.7
Thhalv10002098m.g Eutrema salsugineum HOM05D006661 ORTHO05D008369 2.4e-13 78.6 47 78.7
Potri.018G056100 Populus trichocarpa HOM05D006661 ORTHO05D008369 3.1e-13 78.2 44 84.1
Actinidia01201 Actinidia chinensis HOM05D006661 ORTHO05D008369 4.1e-13 77.8 47 78.7
AT2G25950 Arabidopsis thaliana HOM05D006661 ORTHO05D008369 4.1e-13 77.8 47 76.6
BcaB06g29613 Brassica carinata HOM05D006661 ORTHO05D008369 4.1e-13 77.8 47 76.6
CSS0024744 Camellia sinensis var. sinensis HOM05D006661 ORTHO05D008369 4.1e-13 77.8 47 80.9
vmacro00160 Vaccinium macrocarpon HOM05D006661 ORTHO05D008369 4.1e-13 77.8 47 78.7
Carub.0004s0581 Capsella rubella HOM05D006661 ORTHO05D008369 5.3e-13 77.4 47 78.7
SalBow4G0568 Salvia bowleyana HOM05D006661 ORTHO05D008369 1.2e-12 76.3 47 78.7
Eucgr.H03073 Eucalyptus grandis HOM05D006661 ORTHO05D008369 1.5e-12 75.9 47 78.7
Lsat_1_v5_gn_6_13140 Lactuca sativa HOM05D006661 ORTHO05D008369 1.5e-12 75.9 44 81.8
Sc23g0005520 Simmondsia chinensis HOM05D006661 ORTHO05D008369 2.0e-12 75.5 44 79.5
DCAR_003069 Daucus carota HOM05D006661 ORTHO05D008369 2.6e-12 75.1 44 79.5
CARHR287330 Cardamine hirsuta HOM05D006661 ORTHO05D008369 3.4e-12 74.7 44 77.3
Rhsim11G0046400 Rhododendron simsii HOM05D006661 ORTHO05D008369 3.4e-12 74.7 47 76.6
EL10Ac2g03924 Beta vulgaris HOM05D006661 ORTHO05D008369 4.5e-12 74.3 47 72.3
Solyc08g065640.3 Solanum lycopersicum HOM05D006661 ORTHO05D008369 4.5e-12 74.3 44 79.5
Sopen08g019360 Solanum pennellii HOM05D006661 ORTHO05D008369 4.5e-12 74.3 44 79.5
Peaxi162Scf00436g00823 Petunia axillaris HOM05D006661 ORTHO05D008369 5.9e-12 73.9 47 76.6
Hund03354 Selenicereus undatus HOM05D006661 ORTHO05D008369 7.7e-12 73.6 44 75.0
HanXRQChr09g0251201 Helianthus annuus HOM05D006661 ORTHO05D008369 1.0e-11 73.2 44 79.5
PGSC0003DMG400002199 Solanum tuberosum HOM05D006661 ORTHO05D008369 1.0e-11 73.2 44 77.3
Migut.A00149 Erythranthe guttata HOM05D006661 ORTHO05D008369 1.3e-11 72.8 47 74.5
Nitab4.5_0000359g0060 Nicotiana tabacum HOM05D006661 ORTHO05D008369 1.3e-11 72.8 47 74.5
Nitab4.5_0001179g0020 Nicotiana tabacum HOM05D006661 ORTHO05D008369 1.3e-11 72.8 47 74.5
SGA_v2.0_scaffold88G27220 Striga asiatica HOM05D006661 ORTHO05D008369 1.3e-11 72.8 47 72.3
Zm00001eb162230 Zea mays HOM05D006661 ORTHO05D008369 1.3e-11 72.8 44 75.0
Nn6g35396 Nelumbo nucifera HOM05D006661 ORTHO05D008369 2.2e-11 72.0 44 79.5
THA.LOC104803733 Tarenaya hassleriana HOM05D006661 ORTHO05D008369 2.2e-11 72.0 47 76.6
MSTRG.11669 Avicennia marina HOM05D006661 ORTHO05D008369 3.8e-11 71.2 47 72.3
ECA233G6145 Erigeron canadensis HOM05D006661 ORTHO05D008369 3.8e-11 71.2 44 77.3
Cc08_g10380 Coffea canephora HOM05D006661 ORTHO05D008369 6.5e-11 70.5 44 72.7
Os01g0559000 Oryza sativa ssp. japonica HOM05D006661 ORTHO05D008369 8.5e-11 70.1 44 75.0
AUR62009178 Chenopodium quinoa HOM05D006661 ORTHO05D008369 1.4e-10 69.3 44 68.2
AUR62022048 Chenopodium quinoa HOM05D006661 ORTHO05D008369 1.4e-10 69.3 44 68.2
ATR0789G168 Amborella trichopoda HOM05D006661 ORTHO05D008369 1.9e-10 68.9 44 72.7
unitig_748.g7518 Utricularia gibba HOM05D006661 ORTHO05D008369 1.9e-10 68.9 44 75.0
Aqoxy6G02410 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 2.5e-10 68.6 95 49.5
CAN.G6.20 Capsicum annuum HOM05D006661 ORTHO05D008369 2.5e-10 68.6 44 75.0
CDE07G0448 Ceratophyllum demersum HOM05D006661 ORTHO05D008369 1.6e-09 65.9 44 70.5
PSO832G3146 Papaver somniferum HOM05D006661 ORTHO05D008369 2.7e-09 65.1 47 68.1
SMO169G0297 Selaginella moellendorffii HOM05D006661 ORTHO05D008369 1.0e-08 63.2 44 68.2
HPP92_005507 Vanilla planifolia HOM05D006661 ORTHO05D008369 5.1e-08 60.8 44 65.9
AagrBONN_evm.TU.Sc2ySwM_362.2052 Anthoceros agrestis HOM05D006661 ORTHO05D008369 7.4e-07 57.0 44 63.6
arahy.Tifrunner.gnm1.ann1.48AWB7 Arachis hypogaea HOM05D018999 ORTHO05D018494 2.8e-06 55.1 30 86.7
FAN27G1843 Fragaria x ananassa HOM05D006661 ORTHO05D008369 6.3e-06 53.9 36 72.2


User provided reference genes

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