Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_20741 Corchorus olitorius HOM05D001004 ORTHO05D000653 2.4e-49 198.4 90 100.0
COL.COLO4_35913 Corchorus olitorius HOM05D001004 ORTHO05D000653 3.6e-45 184.5 90 93.3
Gorai.009G297300 Gossypium raimondii HOM05D001004 ORTHO05D000653 2.1e-32 142.1 86 68.6
Gohir.A05G281700 Gossypium hirsutum HOM05D001004 ORTHO05D000653 3.5e-32 141.4 86 67.4
Gohir.D05G283088 Gossypium hirsutum HOM05D001004 ORTHO05D000653 4.6e-32 141.0 86 67.4
Gorai.009G297200 Gossypium raimondii HOM05D001004 ORTHO05D000653 4.6e-32 141.0 86 67.4
Gorai.009G297400 Gossypium raimondii HOM05D001004 ORTHO05D000653 4.6e-32 141.0 86 67.4
Gohir.A05G281800 Gossypium hirsutum HOM05D001004 ORTHO05D000653 7.8e-32 140.2 86 67.4
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 5.1e-31 137.5 87 67.8
Gohir.A05G281850 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.3e-26 122.9 78 66.7
Cfa010162 Carpinus fangiana HOM05D009680 ORTHO05D000653 1.6e-24 115.9 89 55.1
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 4.3e-22 107.8 89 52.8
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 2.0e-19 99.0 90 48.9
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 1.4e-17 92.8 83 51.8
Carub.0003s2826 Capsella rubella HOM05D001004 ORTHO05D000653 9.2e-17 90.1 84 47.6
MELO3C034586.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.0e-15 86.7 84 45.2
ClCG02G012910 Citrullus lanatus HOM05D001004 ORTHO05D000653 1.7e-15 85.9 85 45.9
Thhalv10011055m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 3.0e-15 85.1 83 47.0
BolC3t14835H Brassica oleracea HOM05D001004 ORTHO05D000653 5.1e-15 84.3 83 47.0
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.1e-14 83.2 84 44.0
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 1.9e-14 82.4 77 44.2
CARHR155430 Cardamine hirsuta HOM05D001004 ORTHO05D000653 3.3e-14 81.6 85 42.4
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 4.3e-14 81.3 83 44.6
Eucgr.D01653 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.3e-14 81.3 90 43.3
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 5.6e-14 80.9 86 40.7
Haze_10651 Corylus avellana HOM05D001004 ORTHO05D000653 9.6e-14 80.1 60 55.0
CARHR155530 Cardamine hirsuta HOM05D009680 ORTHO05D000653 2.8e-13 78.6 67 47.8
Thhalv10011127m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 2.8e-13 78.6 67 49.3
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 2.8e-13 78.6 76 42.1
Migut.C00659 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.7e-13 77.8 88 44.3
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 4.7e-13 77.8 90 47.8
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 4.7e-13 77.8 85 45.9
AUR62006914 Chenopodium quinoa HOM05D008628 ORTHO05D010443 1.8e-12 75.9 71 49.3
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 1.8e-12 75.9 92 42.4
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.8e-12 75.9 84 45.2
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 1.8e-12 75.9 76 40.8
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 3.1e-12 75.1 91 39.6
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.1e-12 75.1 85 40.0
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 4.0e-12 74.7 77 46.8
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.3e-12 74.3 89 40.4
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 5.3e-12 74.3 75 42.7
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.4e-11 71.2 89 42.7
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 1.7e-10 69.3 87 41.4
Eucgr.F00211 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.7e-10 69.3 70 45.7
Haze_01631 Corylus avellana HOM05D001004 ORTHO05D000653 2.2e-10 68.9 94 39.4
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 2.2e-10 68.9 75 40.0
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.9e-10 68.6 89 40.4
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.8e-10 68.2 69 46.4
SGA_v2.0_scaffold14G07008 Striga asiatica HOM05D000760 ORTHO05D000618 3.8e-10 68.2 85 43.5
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 8.4e-10 67.0 92 42.4
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 8.4e-10 67.0 92 42.4
Oeu017852.1 Olea europaea HOM05D001004 ORTHO05D000653 2.4e-09 65.5 76 42.1
RcHm_v2.0_Chr2g0105871 Rosa chinensis HOM05D001004 ORTHO05D000653 2.4e-09 65.5 78 43.6
Nitab4.5_0006484g0030 Nicotiana tabacum HOM05D009680 ORTHO05D000653 3.2e-09 65.1 90 42.2
Oeu002604.1 Olea europaea HOM05D001004 ORTHO05D000653 4.2e-09 64.7 64 50.0
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 5.4e-09 64.3 81 42.0
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 5.4e-09 64.3 81 42.0
PGR102G1398 Punica granatum HOM05D001004 ORTHO05D000653 1.6e-08 62.8 85 40.0
Migut.F00732 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.7e-08 62.0 82 40.2
FvH4_1g16190 Fragaria vesca HOM05D001004 ORTHO05D000653 2.7e-08 62.0 78 38.5
FAN26G2526 Fragaria x ananassa HOM05D001004 ORTHO05D000653 2.7e-08 62.0 78 38.5
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 2.7e-08 62.0 81 39.5
PGR102G1734 Punica granatum HOM05D001004 ORTHO05D000653 2.7e-08 62.0 85 37.6
RcHm_v2.0_Chr6g0294471 Rosa chinensis HOM05D001004 ORTHO05D000653 2.7e-08 62.0 76 42.1
A05p31090 Brassica napus HOM05D001004 ORTHO05D000653 3.5e-08 61.6 60 46.7
BraA05t21950Z Brassica rapa HOM05D001004 ORTHO05D000653 3.5e-08 61.6 60 46.7
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 4.6e-08 61.2 59 49.2
Nitab4.5_0000302g0080 Nicotiana tabacum HOM05D001004 ORTHO05D000653 6.0e-08 60.8 64 46.9
AUR62006913 Chenopodium quinoa HOM05D001004 ORTHO05D000653 7.8e-08 60.5 70 38.6
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 7.8e-08 60.5 64 46.9
Nitab4.5_0006346g0020 Nicotiana tabacum HOM05D001004 ORTHO05D000653 1.0e-07 60.1 64 45.3
Eucgr.I00166 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.7e-07 59.3 64 45.3
Eucgr.I00167 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.7e-07 59.3 64 45.3
TAR636G3448 Trochodendron aralioides HOM05D001004 ORTHO05D000653 2.3e-07 58.9 64 45.3
AUR62000561 Chenopodium quinoa HOM05D001004 ORTHO05D000653 3.0e-07 58.5 44 52.3
CsaV3_1G045190 Cucumis sativus L. HOM05D001004 ORTHO05D000653 3.9e-07 58.2 59 45.8
Dinv43966 Davidia involucrata HOM05D008628 ORTHO05D010443 3.9e-07 58.2 51 51.0
FAN28G2625 Fragaria x ananassa HOM05D001004 ORTHO05D000653 3.9e-07 58.2 78 38.5
Carub.0008s0507 Capsella rubella HOM05D001004 ORTHO05D000653 5.1e-07 57.8 79 39.2
Thecc.10G155400 Theobroma cacao HOM05D000011 ORTHO05D000157 6.6e-07 57.4 46 54.3
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 8.7e-07 57.0 89 44.9
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 8.7e-07 57.0 89 44.9
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.1e-06 56.6 68 44.1
Lsat_1_v5_gn_0_14240 Lactuca sativa HOM05D001004 ORTHO05D000653 1.1e-06 56.6 80 36.2
Atru.chr4.2207 Acer truncatum HOM05D001004 ORTHO05D000653 1.9e-06 55.8 64 43.8
CsaV3_2G017000 Cucumis sativus L. HOM05D001004 ORTHO05D000653 1.9e-06 55.8 66 40.9
Potri.010G075800 Populus trichocarpa HOM05D001004 ORTHO05D000653 1.9e-06 55.8 64 43.8
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 1.9e-06 55.8 85 43.5
Hma1.2p1_0310F.1_g120940 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 2.5e-06 55.5 64 42.2
Atru.chr4.2205 Acer truncatum HOM05D001004 ORTHO05D000653 3.3e-06 55.1 61 42.6
AL8G16730 Arabidopsis lyrata HOM05D001004 ORTHO05D000653 3.3e-06 55.1 79 39.2
Lsat_1_v5_gn_1_35961 Lactuca sativa HOM05D001004 ORTHO05D000653 3.3e-06 55.1 81 34.6
Atru.chr4.2208 Acer truncatum HOM05D001004 ORTHO05D000653 4.3e-06 54.7 61 42.6
Migut.A00975 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.3e-06 54.7 64 42.2
Migut.A00977 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.3e-06 54.7 64 42.2
Migut.A00979 Erythranthe guttata HOM05D001004 ORTHO05D000653 5.6e-06 54.3 64 40.6
Migut.L00983 Erythranthe guttata HOM05D001004 ORTHO05D000653 5.6e-06 54.3 65 44.6
Thecc.10G077700 Theobroma cacao HOM05D001004 ORTHO05D000653 5.6e-06 54.3 64 40.6
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 7.3e-06 53.9 89 42.7
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 7.3e-06 53.9 89 42.7
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 7.3e-06 53.9 97 42.3
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 9.6e-06 53.5 91 41.8
Nn4g26614 Nelumbo nucifera HOM05D008628 ORTHO05D010443 9.6e-06 53.5 84 39.3
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 9.6e-06 53.5 66 40.9
Thecc.10G078100 Theobroma cacao HOM05D001004 ORTHO05D000653 9.6e-06 53.5 64 40.6
TPR.G31261 Trifolium pratense HOM05D001004 ORTHO05D000653 9.6e-06 53.5 64 42.2


User provided reference genes

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