Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.6e-217 759.2 394 100.0
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.9e-159 566.2 393 76.1
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 6.4e-147 524.6 410 69.8
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 2.3e-144 516.2 411 69.1
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.0e-140 503.1 399 70.4
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 1.3e-107 394.0 420 56.7
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 3.6e-97 359.4 277 71.1
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 1.4e-96 357.5 457 49.0
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 1.8e-96 357.1 418 50.7
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.8e-93 347.1 478 46.7
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 5.3e-93 345.5 417 51.3
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 9.1e-93 344.7 414 50.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.5e-90 337.4 415 49.4
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 3.2e-90 336.3 430 50.0
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 2.1e-89 333.6 404 50.2
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 4.0e-88 329.3 417 48.2
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 6.8e-88 328.6 474 45.4
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.6e-87 326.6 423 48.5
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 7.5e-87 325.1 423 48.2
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 2.8e-86 323.2 412 46.4
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 7.0e-85 318.5 508 44.9
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 6.5e-83 312.0 423 47.3
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 1.9e-82 310.5 350 51.7
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.6e-81 307.4 306 56.9
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 1.6e-81 307.4 417 49.2
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 8.9e-80 301.6 394 48.2
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 2.3e-75 287.0 402 46.0
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 8.6e-75 285.0 466 42.3
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.9e-74 283.9 474 42.6
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 3.3e-74 283.1 401 46.6
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 4.3e-74 282.7 392 47.2
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 9.5e-74 281.6 411 44.3
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 1.6e-73 280.8 460 44.1
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 2.0e-71 273.9 411 44.8
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 2.6e-71 273.5 501 39.5
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.4e-71 272.7 469 40.9
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 5.8e-71 272.3 507 39.6
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.3e-70 271.2 445 41.1
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.7e-70 270.8 411 44.3
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.7e-70 270.8 387 46.5
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 2.9e-70 270.0 398 45.5
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 3.7e-70 269.6 411 44.8
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.9e-69 267.3 405 43.7
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 4.1e-69 266.2 355 47.6
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 4.1e-69 266.2 508 39.6
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 4.1e-69 266.2 398 44.7
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.6e-68 264.2 456 42.3
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 2.7e-68 263.5 451 41.5
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.7e-67 260.8 462 40.3
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 3.0e-67 260.0 425 43.5
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 3.9e-67 259.6 513 38.2
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 6.6e-67 258.8 384 45.3
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 1.1e-66 258.1 426 40.6
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 3.3e-66 256.5 359 43.5
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 5.6e-66 255.8 354 45.2
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 9.5e-66 255.0 510 38.6
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 6.2e-65 252.3 405 43.5
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 6.2e-65 252.3 422 43.4
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 6.2e-65 252.3 465 40.0
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 8.0e-65 251.9 418 42.6
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.8e-64 250.8 438 41.3
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 1.5e-63 247.7 366 43.2
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 4.4e-63 246.1 429 38.0
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 7.5e-63 245.4 440 40.5
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 8.3e-62 241.9 425 41.4
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 8.3e-62 241.9 355 45.4
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.4e-61 241.1 416 43.8
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 3.2e-61 240.0 552 36.1
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 7.0e-61 238.8 423 42.8
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 7.0e-61 238.8 313 47.3
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 7.0e-61 238.8 354 44.9
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.6e-60 237.7 475 39.6
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.1e-60 237.3 433 38.1
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 2.7e-60 236.9 412 41.5
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 4.6e-60 236.1 398 41.2
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 8.6e-59 231.9 387 41.1
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 5.6e-58 229.2 406 42.4
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 7.3e-58 228.8 567 34.6
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 9.5e-58 228.4 473 35.7
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 6.2e-57 225.7 353 45.3
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 8.9e-56 221.9 452 37.4
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.0e-55 220.7 429 38.0
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 2.6e-55 220.3 413 40.0
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 9.9e-55 218.4 354 45.2
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 6.4e-54 215.7 454 37.9
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 8.3e-54 215.3 425 39.8
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 7.1e-53 212.2 416 38.9
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 7.1e-53 212.2 500 35.4
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 6.0e-52 209.1 409 35.7
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.3e-51 208.0 433 38.3
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 3.0e-51 206.8 502 33.9
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 3.9e-51 206.5 369 40.7
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.2e-49 201.4 475 32.8
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 1.1e-48 198.4 530 34.0
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.2e-47 194.9 327 40.1
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 6.4e-46 189.1 419 35.6
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 8.4e-46 188.7 517 33.5
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 8.4e-46 188.7 517 33.5
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 2.7e-44 183.7 247 44.9
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 2.7e-44 183.7 257 47.5
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 4.6e-44 183.0 517 33.1
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 2.1e-41 174.1 376 36.4
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 3.1e-40 170.2 396 37.1
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 1.7e-38 164.5 308 40.3
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 3.2e-37 160.2 463 31.3
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.2e-37 160.2 215 49.8
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.6e-36 157.9 373 33.0
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 5.6e-34 149.4 385 30.9
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 9.6e-34 148.7 355 34.6
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.0e-31 141.0 176 47.7
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 3.4e-31 140.2 282 37.6
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 4.5e-31 139.8 197 43.1
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 2.0e-23 114.4 419 30.8
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.1e-18 98.6 206 36.4
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 3.4e-15 87.0 99 48.5
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 1.3e-14 85.1 67 58.2


User provided reference genes

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