Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.1e-73 280.0 157 100.0
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.5e-65 251.1 157 91.1
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.8e-63 246.1 157 86.0
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.1e-57 226.9 157 83.4
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 3.6e-56 221.9 157 82.8
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 4.6e-48 194.9 138 84.8
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 1.1e-46 190.3 159 72.3
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.6e-43 179.1 159 73.0
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.8e-42 175.3 158 69.0
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.8e-42 175.3 158 69.0
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 5.0e-42 174.9 162 66.7
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 5.0e-42 174.9 155 71.0
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 8.5e-42 174.1 158 70.3
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.5e-41 172.6 148 70.3
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.5e-41 172.6 157 69.4
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 3.2e-41 172.2 158 69.0
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.2e-40 170.2 149 70.5
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 2.1e-40 169.5 159 65.4
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 2.1e-40 169.5 157 66.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 7.9e-40 167.5 153 69.3
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.8e-39 166.4 155 67.7
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 6.7e-39 164.5 153 69.3
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 2.6e-38 162.5 153 68.6
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 3.3e-38 162.2 154 70.1
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 4.4e-38 161.8 157 69.4
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 5.7e-38 161.4 157 66.9
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 9.7e-38 160.6 160 70.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.7e-37 159.8 148 65.5
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 2.2e-37 159.5 159 63.5
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.7e-37 158.7 153 67.3
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 4.8e-37 158.3 153 66.7
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 3.1e-36 155.6 149 67.1
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 3.1e-36 155.6 159 67.9
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.1e-36 155.2 159 65.4
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 5.3e-36 154.8 106 85.8
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 5.3e-36 154.8 149 67.1
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 5.3e-36 154.8 149 67.1
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 7.0e-36 154.5 160 64.4
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 9.1e-36 154.1 108 83.3
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.2e-35 153.7 155 63.2
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.6e-35 153.3 149 66.4
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.6e-35 153.3 149 66.4
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 2.0e-35 152.9 103 85.4
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 4.5e-35 151.8 125 65.6
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 4.5e-35 151.8 159 62.3
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 5.9e-35 151.4 101 87.1
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.0e-34 150.6 112 77.7
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.0e-34 150.6 156 61.5
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.7e-34 149.8 103 83.5
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.7e-34 149.8 95 80.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.2e-34 149.4 101 85.1
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.9e-34 149.1 155 62.6
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 2.9e-34 149.1 124 75.0
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.9e-34 149.1 156 63.5
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 2.9e-34 149.1 115 77.4
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.1e-33 147.1 155 63.2
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.1e-33 147.1 107 81.3
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 2.5e-33 146.0 103 82.5
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 2.5e-33 146.0 110 80.9
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 3.2e-33 145.6 111 78.4
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 4.2e-33 145.2 155 63.9
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 5.5e-33 144.8 101 83.2
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 7.2e-33 144.4 155 64.5
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 9.4e-33 144.1 111 73.9
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.6e-32 143.3 104 65.4
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.6e-32 143.3 153 62.7
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.1e-32 142.9 154 59.7
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 3.6e-32 142.1 104 80.8
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 6.1e-32 141.4 103 82.5
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 6.1e-32 141.4 110 79.1
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.0e-31 140.6 120 71.7
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 1.4e-31 140.2 155 60.0
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.3e-31 139.4 101 81.2
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 3.0e-31 139.0 101 81.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 4.0e-31 138.7 101 82.2
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 5.2e-31 138.3 103 80.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 5.2e-31 138.3 103 80.6
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.2e-31 138.3 100 83.0
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 5.2e-31 138.3 159 62.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 6.7e-31 137.9 106 78.3
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 8.8e-31 137.5 103 83.5
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.6e-30 136.0 102 79.4
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 2.6e-30 136.0 101 78.2
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 5.7e-30 134.8 100 82.0
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 5.7e-30 134.8 103 82.5
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 2.2e-29 132.9 103 78.6
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 2.2e-29 132.9 155 60.0
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 6.3e-29 131.3 101 79.2
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 6.3e-29 131.3 194 52.1
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 8.2e-29 131.0 93 84.9
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 2.4e-28 129.4 101 76.2
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.1e-28 129.0 103 73.8
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.1e-28 129.0 103 73.8
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 7.0e-28 127.9 98 78.6
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 9.1e-28 127.5 156 55.8
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 7.7e-27 124.4 83 67.5
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.5e-25 120.2 80 90.0
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.6e-24 116.7 90 75.6
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 3.0e-23 112.5 103 66.0
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 5.2e-23 111.7 107 66.4
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 9.8e-22 107.5 75 89.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 3.7e-21 105.5 75 82.7
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.1e-20 104.0 79 81.0
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 3.1e-20 102.4 89 67.4
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 4.5e-19 98.6 83 68.7
QL02p017999 Quercus lobata HOM05D007253 ORTHO05D009055 6.6e-10 68.2 76 57.9
Haze_21370 Corylus avellana HOM05D007253 ORTHO05D009055 1.1e-09 67.4 93 46.2
Cfa013009 Carpinus fangiana HOM05D018710 ORTHO05D009055 3.3e-09 65.9 81 51.9
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 1.0e-07 60.8 87 46.0


User provided reference genes

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