Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_18905 Corchorus olitorius HOM05D000590 ORTHO05D009145 0.0e+00 1132.1 565 100.0
Thecc.09G020000 Theobroma cacao HOM05D000590 ORTHO05D009145 5.5e-224 781.2 572 73.1
Duzib168G1510 Durio zibethinus HOM05D000590 ORTHO05D009145 2.4e-219 765.8 571 72.7
Gorai.001G035300 Gossypium raimondii HOM05D000590 ORTHO05D009145 8.2e-188 661.0 572 64.3
Gohir.D07G033800 Gossypium hirsutum HOM05D000590 ORTHO05D009145 2.0e-186 656.4 572 64.0
Gohir.A07G030000 Gossypium hirsutum HOM05D000590 ORTHO05D009145 5.7e-173 611.7 559 62.6
Atru.chr7.2494 Acer truncatum HOM05D000590 ORTHO05D009145 1.2e-98 364.8 585 42.7
Cfa013108 Carpinus fangiana HOM05D000590 ORTHO05D009145 5.1e-97 359.4 577 44.7
Potri.018G023000 Populus trichocarpa HOM05D000590 ORTHO05D009145 3.4e-93 346.7 589 41.6
Haze_21466 Corylus avellana HOM05D000590 ORTHO05D009145 1.1e-91 341.7 602 41.4
Sabra18G0025500 Salix brachista HOM05D000590 ORTHO05D009145 9.4e-91 338.6 583 41.3
QL02p020481 Quercus lobata HOM05D000590 ORTHO05D009145 8.8e-89 332.0 568 41.9
CiPaw.07G226700 Carya illinoinensis HOM05D000590 ORTHO05D009145 1.1e-86 325.1 570 40.2
Prupe.1G485700 Prunus persica HOM05D000590 ORTHO05D009145 2.6e-80 303.9 564 39.0
Dinv18158 Davidia involucrata HOM05D000590 ORTHO05D009145 1.4e-78 298.1 563 39.4
Dinv18162 Davidia involucrata HOM05D000590 ORTHO05D009145 1.4e-78 298.1 563 39.4
GSVIVG01035924001 Vitis vinifera HOM05D000590 ORTHO05D009145 7.0e-78 295.8 599 37.2
Manes.03G012400 Manihot esculenta HOM05D000590 ORTHO05D009145 1.6e-74 284.6 561 36.2
RcHm_v2.0_Chr6g0297291 Rosa chinensis HOM05D000590 ORTHO05D009145 5.7e-72 276.2 570 36.8
MD15G1130200 Malus domestica HOM05D000590 ORTHO05D009145 2.8e-71 273.9 565 37.5
TAR636G2375 Trochodendron aralioides HOM05D000590 ORTHO05D009145 5.3e-70 269.6 593 33.7
TWI32G0726 Tripterygium wilfordii HOM05D000590 ORTHO05D009145 7.0e-70 269.2 588 36.4
FAN20G2931 Fragaria x ananassa HOM05D000590 ORTHO05D009145 2.7e-69 267.3 554 36.6
FvH4_2g28350 Fragaria vesca HOM05D000590 ORTHO05D009145 5.9e-69 266.2 552 36.4
FAN24G2365 Fragaria x ananassa HOM05D000590 ORTHO05D009145 5.9e-69 266.2 552 36.4
CSS0004481 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D009145 1.9e-67 261.2 586 34.5
FAN27G0748 Fragaria x ananassa HOM05D000590 ORTHO05D009145 4.2e-67 260.0 554 36.1
Nn8g39696 Nelumbo nucifera HOM05D000590 ORTHO05D009145 1.3e-63 248.4 559 34.7
Duzib150G0340 Durio zibethinus HOM05D000590 ORTHO05D009145 3.1e-62 243.8 224 61.6
vmacro21896 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 2.2e-55 221.1 536 34.7
vmacro11208 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 2.8e-55 220.7 576 33.5
Actinidia13215 Actinidia chinensis HOM05D000590 ORTHO05D009145 1.5e-51 208.4 671 31.3
Glyma.17G215200 Glycine max HOM05D000590 ORTHO05D009145 1.6e-50 204.9 555 33.3
Glyma.14G112700 Glycine max HOM05D000590 ORTHO05D009145 2.1e-50 204.5 553 32.9
Rhsim02G0205200 Rhododendron simsii HOM05D000590 ORTHO05D009145 4.0e-49 200.3 561 33.3
Phvul.001G047700 Phaseolus vulgaris HOM05D000590 ORTHO05D009145 1.2e-48 198.7 540 33.1
Lj5g0001427 Lotus japonicus HOM05D000590 ORTHO05D009145 1.7e-47 194.9 531 32.6
CANSAT25G0126 Cannabis sativa HOM05D000590 ORTHO05D009145 5.4e-46 189.9 549 33.2
Ca_13040_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 9.5e-43 179.1 544 30.7
Ca_30354_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 9.5e-43 179.1 544 30.7
TPR.G38859 Trifolium pratense HOM05D000590 ORTHO05D009145 6.2e-42 176.4 540 30.6
Oeu010890.3 Olea europaea HOM05D000590 ORTHO05D009145 1.1e-38 165.6 543 31.1
THA.LOC104815012 Tarenaya hassleriana HOM05D000590 ORTHO05D009145 4.1e-38 163.7 569 31.8
VMungo0647G0757 Vigna mungo HOM05D000590 ORTHO05D009145 1.3e-36 158.7 533 30.0
Medtr1g012870 Medicago truncatula HOM05D000590 ORTHO05D009145 2.3e-36 157.9 515 30.7
Aqoxy7G03545 Aquilegia oxysepala HOM05D000590 ORTHO05D009145 1.9e-35 154.8 584 30.5
Nitab4.5_0002992g0010 Nicotiana tabacum HOM05D028555 ORTHO05D009145 6.2e-34 149.8 576 29.7
Cc08_g00250 Coffea canephora HOM05D000590 ORTHO05D009145 2.3e-33 147.9 544 28.1
Actinidia22318 Actinidia chinensis HOM05D000590 ORTHO05D009145 3.1e-33 147.5 596 30.0
EL10Ac2g04159 Beta vulgaris HOM05D000590 ORTHO05D009145 5.8e-32 143.3 533 29.3
Nitab4.5_0005958g0030 Nicotiana tabacum HOM05D000590 ORTHO05D009145 1.4e-30 138.7 577 29.1
Sc06g0000460 Simmondsia chinensis HOM05D000590 ORTHO05D009145 9.2e-30 136.0 538 28.1
AUR62012442 Chenopodium quinoa HOM05D000590 ORTHO05D009145 2.3e-28 131.3 563 28.1
Ciclev10010421m.g Citrus clementina HOM05D000590 ORTHO05D009145 1.1e-27 129.0 226 38.9
AUR62031566 Chenopodium quinoa HOM05D000590 ORTHO05D009145 5.6e-27 126.7 569 28.3
SalBow4G1906 Salvia bowleyana HOM05D000590 ORTHO05D009145 6.2e-26 123.2 531 29.0
Ah.10g035720 Amaranthus hybridus HOM05D000590 ORTHO05D009145 8.9e-25 119.4 465 30.5
Lsat_1_v5_gn_1_43780 Lactuca sativa HOM05D000590 ORTHO05D009145 1.5e-24 118.6 541 25.9
Peaxi162Scf00116g00109 Petunia axillaris HOM05D000590 ORTHO05D009145 4.4e-24 117.1 463 29.6
Lj7P728T26 Lonicera japonica HOM05D000590 ORTHO05D009145 1.6e-21 108.6 304 31.2
Hund04451 Selenicereus undatus HOM05D000590 ORTHO05D009145 1.9e-19 101.7 584 25.0
ECA248G0426 Erigeron canadensis HOM05D000590 ORTHO05D009145 2.5e-19 101.3 416 29.6
HanXRQChr01g0030621 Helianthus annuus HOM05D000590 ORTHO05D009145 6.9e-17 93.2 506 26.1
CAN.G669.6 Capsicum annuum HOM05D000590 ORTHO05D009145 5.1e-12 77.0 146 38.4
ATR0767G168 Amborella trichopoda HOM05D000590 ORTHO05D009145 8.7e-12 76.3 526 25.7
Cpa.g.sc187.21 Carica papaya HOM05D000590 ORTHO05D009145 2.6e-08 64.7 107 41.1
HPP92_000484 Vanilla planifolia HOM05D000590 ORTHO05D009145 1.1e-06 59.3 331 24.5


User provided reference genes

Program Settings