Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_18812 Corchorus olitorius HOM05D006248 ORTHO05D007896 1.1e-63 246.5 124 100.0
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 5.7e-57 224.2 124 87.1
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 1.2e-51 206.5 124 81.5
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 3.5e-51 204.9 124 78.2
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 1.3e-50 203.0 119 81.5
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 6.7e-50 200.7 124 75.8
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 8.7e-50 200.3 124 78.2
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 1.1e-49 199.9 124 73.4
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 1.1e-49 199.9 124 75.8
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 1.9e-49 199.1 120 78.3
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 1.9e-49 199.1 119 79.0
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 1.9e-49 199.1 124 74.2
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 2.5e-49 198.7 119 75.6
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 3.3e-49 198.4 119 78.2
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 4.3e-49 198.0 124 75.0
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 4.3e-49 198.0 122 75.4
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 5.7e-49 197.6 120 80.8
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 5.7e-49 197.6 120 80.8
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 7.4e-49 197.2 123 75.6
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 7.4e-49 197.2 122 78.7
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 7.4e-49 197.2 120 80.0
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 9.7e-49 196.8 119 76.5
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 9.7e-49 196.8 119 78.2
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 9.7e-49 196.8 124 74.2
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 9.7e-49 196.8 119 74.8
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 9.7e-49 196.8 124 74.2
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 9.7e-49 196.8 124 75.0
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 1.3e-48 196.4 119 74.8
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 1.3e-48 196.4 124 77.4
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 1.3e-48 196.4 124 73.4
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 1.3e-48 196.4 124 75.0
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 1.3e-48 196.4 124 74.2
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 1.3e-48 196.4 124 74.2
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 2.2e-48 195.7 119 77.3
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 2.2e-48 195.7 116 77.6
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 2.8e-48 195.3 119 73.9
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 2.8e-48 195.3 119 73.9
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 2.8e-48 195.3 122 77.0
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 2.8e-48 195.3 122 76.2
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 3.7e-48 194.9 124 72.6
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 3.7e-48 194.9 119 77.3
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 4.8e-48 194.5 119 73.1
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 4.8e-48 194.5 119 73.1
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 4.8e-48 194.5 124 71.8
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 6.3e-48 194.1 121 73.6
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 6.3e-48 194.1 124 71.8
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 1.1e-47 193.4 119 73.9
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 1.1e-47 193.4 124 73.4
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 1.4e-47 193.0 119 75.6
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 1.8e-47 192.6 122 73.8
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 1.8e-47 192.6 119 74.8
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 1.8e-47 192.6 122 75.4
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 1.8e-47 192.6 124 71.8
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 1.8e-47 192.6 119 73.1
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 2.4e-47 192.2 124 72.6
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 2.4e-47 192.2 124 76.6
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 2.4e-47 192.2 119 72.3
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 2.4e-47 192.2 122 73.8
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 2.4e-47 192.2 121 72.7
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 3.1e-47 191.8 124 72.6
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 3.1e-47 191.8 124 73.4
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 4.1e-47 191.4 122 73.8
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 4.1e-47 191.4 124 71.8
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 5.3e-47 191.0 119 72.3
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 5.3e-47 191.0 119 74.8
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 5.3e-47 191.0 124 71.8
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 5.3e-47 191.0 124 75.0
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 6.9e-47 190.7 119 72.3
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 6.9e-47 190.7 119 72.3
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 9.0e-47 190.3 124 75.0
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 9.0e-47 190.3 119 72.3
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 9.0e-47 190.3 119 74.8
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 1.2e-46 189.9 119 72.3
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 1.2e-46 189.9 124 70.2
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 1.5e-46 189.5 124 75.0
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 1.5e-46 189.5 124 71.0
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 2.0e-46 189.1 121 71.9
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 2.0e-46 189.1 119 69.7
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 4.5e-46 188.0 119 69.7
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 5.9e-46 187.6 119 74.8
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 7.7e-46 187.2 119 74.8
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 7.7e-46 187.2 124 72.6
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 1.0e-45 186.8 124 71.8
MD02G1007100 Malus domestica HOM05D006248 ORTHO05D007896 1.0e-45 186.8 124 70.2
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 1.3e-45 186.4 124 72.6
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 2.2e-45 185.7 123 69.9
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 2.9e-45 185.3 119 71.4
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 2.9e-45 185.3 122 73.0
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 5.0e-45 184.5 119 71.4
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 5.0e-45 184.5 113 75.2
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 5.0e-45 184.5 124 73.4
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 6.5e-45 184.1 119 70.6
Hma1.2p1_0222F.1_g093600 Hydrangea macrophylla HOM05D006248 ORTHO05D007896 8.5e-45 183.7 150 62.7
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.1e-44 183.3 123 69.1
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 1.1e-44 183.3 119 68.9
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 1.4e-44 183.0 119 68.1
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 1.4e-44 183.0 119 69.7
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 1.4e-44 183.0 123 69.1
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 4.2e-44 181.4 124 68.5
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 4.2e-44 181.4 124 68.5
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 2.1e-43 179.1 119 73.1
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 3.6e-43 178.3 124 66.9
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 6.1e-43 177.6 119 71.4
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 3.9e-42 174.9 105 76.2
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 4.3e-41 171.4 122 63.9
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 5.7e-41 171.0 110 70.9
Sabra06G0139600 Salix brachista HOM05D006248 ORTHO05D007896 9.7e-41 170.2 190 49.5
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 1.5e-38 162.9 119 69.7
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 2.2e-37 159.1 122 63.1
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 5.5e-36 154.5 106 70.8
VMungo0720G3169 Vigna mungo HOM05D006248 ORTHO05D007896 1.6e-35 152.9 213 42.7
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 1.0e-34 150.2 124 54.0
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 3.9e-34 148.3 119 57.1
CDE11G0689 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 1.1e-33 146.7 97 69.1
unitig_746.g26565 Utricularia gibba HOM05D006248 ORTHO05D007896 7.0e-31 137.5 83 78.3
Cre09.g398289 Chlamydomonas reinhardtii HOM05D006248 ORTHO05D007896 1.7e-29 132.9 120 55.0
MCO11G046 Micromonas commoda HOM05D006248 ORTHO05D007896 6.1e-27 124.4 121 52.9
PRCOL_00000503 Prasinoderma coloniale HOM05D006248 ORTHO05D007896 1.0e-26 123.6 119 49.6
Hund24348 Selenicereus undatus HOM05D006248 ORTHO05D007896 4.8e-24 114.8 78 70.5
FAN28G2468 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.0e-22 109.4 69 73.9
BcaNung04570 Brassica carinata HOM05D006248 ORTHO05D007896 3.8e-21 105.1 68 73.5
Hund24363 Selenicereus undatus HOM05D006248 ORTHO05D007896 4.7e-19 98.2 61 75.4
Hund24364 Selenicereus undatus HOM05D006248 ORTHO05D007896 4.7e-19 98.2 61 75.4
Lj6g0015066 Lotus japonicus HOM05D001145 ORTHO05D001415 1.0e-18 97.1 68 64.7
HPP92_007364 Vanilla planifolia HOM05D006248 ORTHO05D007896 1.4e-15 86.7 78 60.3
CDE02G1773 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 1.4e-10 70.1 59 52.5
AagrBONN_evm.TU.Sc2ySwM_362.1593 Anthoceros agrestis HOM05D006248 ORTHO05D007896 3.0e-10 68.9 62 53.2
QL08p010511 Quercus lobata HOM05D008272 ORTHO05D010429 1.3e-08 63.5 67 46.3
PRCOL_00003374 Prasinoderma coloniale HOM05D008272 ORTHO05D010429 1.7e-08 63.2 114 33.3
Gohir.A01G079200 Gossypium hirsutum HOM05D008272 ORTHO05D010429 2.2e-08 62.8 67 44.8
VMungo0540G1205 Vigna mungo HOM05D008272 ORTHO05D010429 2.2e-08 62.8 79 43.0
PRCOL_00006194 Prasinoderma coloniale HOM05D006248 ORTHO05D010429 4.9e-08 61.6 104 36.5
Gorai.002G088200 Gossypium raimondii HOM05D008272 ORTHO05D010429 1.1e-07 60.5 67 43.3
Gohir.D01G066300 Gossypium hirsutum HOM05D008272 ORTHO05D010429 1.4e-07 60.1 67 43.3
Migut.M01769 Erythranthe guttata HOM05D008272 ORTHO05D010429 2.4e-07 59.3 74 39.2
Sabra11G0124700 Salix brachista HOM05D008272 ORTHO05D010429 2.4e-07 59.3 94 36.2
CiPaw.11G188800 Carya illinoinensis HOM05D008272 ORTHO05D010429 3.1e-07 58.9 80 40.0
Duzib213G0361 Durio zibethinus HOM05D008272 ORTHO05D010429 5.4e-07 58.2 74 39.2
Phvul.L001633 Phaseolus vulgaris HOM05D008272 ORTHO05D010429 7.0e-07 57.8 53 49.1
Hund23252 Selenicereus undatus HOM05D008272 ORTHO05D010429 7.0e-07 57.8 96 35.4
Sabra11G0124400 Salix brachista HOM05D008272 ORTHO05D010429 9.2e-07 57.4 55 49.1
HPP92_011139 Vanilla planifolia HOM05D008272 ORTHO05D010429 1.2e-06 57.0 67 43.3
EL10Ac4g07813 Beta vulgaris HOM05D008272 ORTHO05D010429 1.6e-06 56.6 96 34.4
CiPaw.12G129300 Carya illinoinensis HOM05D008272 ORTHO05D010429 1.6e-06 56.6 67 41.8
arahy.Tifrunner.gnm1.ann1.MV6CSW Arachis hypogaea HOM05D008272 ORTHO05D010429 2.7e-06 55.8 67 41.8
arahy.Tifrunner.gnm1.ann1.UDA7AK Arachis hypogaea HOM05D008272 ORTHO05D010429 2.7e-06 55.8 67 41.8
ClCG10G005430 Citrullus lanatus HOM05D008272 ORTHO05D010429 2.7e-06 55.8 74 40.5
COL.COLO4_09657 Corchorus olitorius HOM05D008272 ORTHO05D010429 2.7e-06 55.8 67 40.3
VMungo0647G0594 Vigna mungo HOM05D008272 ORTHO05D010429 2.7e-06 55.8 67 41.8
FvH4_2g04690 Fragaria vesca HOM05D008272 ORTHO05D010429 3.5e-06 55.5 67 43.3
Lalb_Chr17g0348421 Lupinus albus HOM05D008272 ORTHO05D010429 3.5e-06 55.5 67 40.3
Potri.011G138900 Populus trichocarpa HOM05D008272 ORTHO05D010429 3.5e-06 55.5 48 52.1
Hund01995 Selenicereus undatus HOM05D008272 ORTHO05D010429 3.5e-06 55.5 67 41.8
GSVIVG01037640001 Vitis vinifera HOM05D008272 ORTHO05D010429 3.5e-06 55.5 48 52.1
Hma1.2p1_1162F.1_g262620 Hydrangea macrophylla HOM05D008272 ORTHO05D010429 4.5e-06 55.1 67 40.3
Cpa.g.sc97.8 Carica papaya HOM05D008272 ORTHO05D010429 5.9e-06 54.7 48 52.1
CsaV3_3G005170 Cucumis sativus L. HOM05D008272 ORTHO05D010429 5.9e-06 54.7 96 36.5
RcHm_v2.0_Chr5g0039361 Rosa chinensis HOM05D008272 ORTHO05D010429 5.9e-06 54.7 74 37.8
MELO3C025383.2 Cucumis melo HOM05D008272 ORTHO05D010429 7.7e-06 54.3 74 39.2
Eucgr.F00768 Eucalyptus grandis HOM05D008272 ORTHO05D010429 7.7e-06 54.3 55 47.3
FAN24G3338 Fragaria x ananassa HOM05D008272 ORTHO05D010429 7.7e-06 54.3 67 41.8
Lj1A872T54 Lonicera japonica HOM05D008272 ORTHO05D010429 7.7e-06 54.3 48 52.1
Hund14975 Selenicereus undatus HOM05D008272 ORTHO05D010429 7.7e-06 54.3 48 50.0
Thecc.07G038600 Theobroma cacao HOM05D008272 ORTHO05D010429 7.7e-06 54.3 67 38.8


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