Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_18749 Corchorus olitorius HOM05D004232 ORTHO05D004909 2.2e-157 558.9 286 100.0
Duzib168G1849 Durio zibethinus HOM05D004232 ORTHO05D004909 6.0e-94 348.2 287 66.9
Thecc.09G036600 Theobroma cacao HOM05D004232 ORTHO05D004909 1.3e-88 330.5 284 64.8
Gorai.010G111300 Gossypium raimondii HOM05D004232 ORTHO05D004909 4.4e-81 305.4 283 63.6
Gohir.D06G096600 Gossypium hirsutum HOM05D004232 ORTHO05D004909 2.2e-80 303.1 283 63.3
Gohir.A06G096400 Gossypium hirsutum HOM05D004232 ORTHO05D004909 8.4e-80 301.2 283 63.6
MD02G1011700 Malus domestica HOM05D004232 ORTHO05D004909 2.0e-57 226.9 286 50.0
Gorai.010G111100 Gossypium raimondii HOM05D004232 ORTHO05D004909 1.3e-56 224.2 279 50.9
Gohir.D06G096401 Gossypium hirsutum HOM05D004232 ORTHO05D004909 2.2e-56 223.4 287 49.5
Gohir.A06G096200 Gossypium hirsutum HOM05D004232 ORTHO05D004909 3.0e-53 213.0 279 49.1
MD15G1157400 Malus domestica HOM05D004232 ORTHO05D004909 2.2e-51 206.8 289 47.4
Manes.06G039700 Manihot esculenta HOM05D004232 ORTHO05D004909 1.1e-50 204.5 278 47.8
Atru.chr7.187 Acer truncatum HOM05D004232 ORTHO05D004909 2.4e-50 203.4 296 45.9
Potri.018G112500 Populus trichocarpa HOM05D004232 ORTHO05D004909 2.2e-48 196.8 287 46.0
RcHm_v2.0_Chr2g0086391 Rosa chinensis HOM05D004232 ORTHO05D004909 1.1e-47 194.5 281 48.0
Sabra18G0095700 Salix brachista HOM05D004232 ORTHO05D004909 1.9e-47 193.7 291 45.7
THA.LOC104808932 Tarenaya hassleriana HOM05D004232 ORTHO05D004909 5.5e-47 192.2 275 45.1
Ciclev10007957m.g Citrus clementina HOM05D004232 ORTHO05D004909 7.9e-46 188.3 295 45.1
FAN26G2384 Fragaria x ananassa HOM05D004232 ORTHO05D004909 1.4e-45 187.6 280 43.9
TWI34G2022 Tripterygium wilfordii HOM05D004232 ORTHO05D004909 1.4e-45 187.6 300 43.7
Haze_19292 Corylus avellana HOM05D004232 ORTHO05D004909 3.9e-45 186.0 285 43.9
Cfa020866 Carpinus fangiana HOM05D004232 ORTHO05D004909 4.4e-44 182.6 285 43.5
CiPaw.15G171200 Carya illinoinensis HOM05D004232 ORTHO05D004909 1.3e-43 181.0 283 44.2
Sc08g0005080 Simmondsia chinensis HOM05D004232 ORTHO05D004909 1.7e-43 180.6 284 40.8
CsaV3_1G028610 Cucumis sativus L. HOM05D004232 ORTHO05D004909 4.8e-43 179.1 294 45.2
FvH4_1g01460 Fragaria vesca HOM05D004232 ORTHO05D004909 4.8e-43 179.1 281 43.4
FAN19G1911 Fragaria x ananassa HOM05D004232 ORTHO05D004909 6.3e-43 178.7 281 42.7
FAN28G1469 Fragaria x ananassa HOM05D004232 ORTHO05D004909 5.3e-42 175.6 281 43.1
MELO3C010252.2 Cucumis melo HOM05D004232 ORTHO05D004909 7.7e-41 171.8 293 44.7
ClCG06G012120 Citrullus lanatus HOM05D004232 ORTHO05D004909 1.7e-40 170.6 293 42.7
QL02p091766 Quercus lobata HOM05D004232 ORTHO05D004909 4.2e-39 166.0 286 43.0
Thhalv10018400m.g Eutrema salsugineum HOM05D004232 ORTHO05D004909 1.2e-38 164.5 281 40.6
PGR142G1232 Punica granatum HOM05D004232 ORTHO05D004909 1.2e-38 164.5 349 37.5
Aa31LG1G2250 Aethionema arabicum HOM05D004232 ORTHO05D004909 3.6e-38 162.9 264 40.2
vmacro21873 Vaccinium macrocarpon HOM05D004232 ORTHO05D004909 4.7e-38 162.5 282 40.1
arahy.Tifrunner.gnm1.ann1.BI9JLD Arachis hypogaea HOM05D004232 ORTHO05D004909 6.1e-38 162.2 269 41.3
Nitab4.5_0000059g0500 Nicotiana tabacum HOM05D004232 ORTHO05D004909 1.0e-37 161.4 280 40.7
Medtr4g116900 Medicago truncatula HOM05D004232 ORTHO05D004909 1.8e-37 160.6 264 42.8
TAR625G0697 Trochodendron aralioides HOM05D004232 ORTHO05D004909 1.8e-37 160.6 271 39.1
Sed0012168 Sechium edule HOM05D004232 ORTHO05D004909 2.3e-37 160.2 285 40.4
arahy.Tifrunner.gnm1.ann1.TW5YT9 Arachis hypogaea HOM05D004232 ORTHO05D004909 3.0e-37 159.8 266 41.0
C06p53760 Brassica napus HOM05D004232 ORTHO05D004909 3.0e-37 159.8 288 40.3
Actinidia04264 Actinidia chinensis HOM05D004232 ORTHO05D004909 3.9e-37 159.5 282 41.1
Ca_21603_v3 Cicer arietinum L. HOM05D004232 ORTHO05D004909 3.9e-37 159.5 272 41.2
CARHR073790 Cardamine hirsuta HOM05D004232 ORTHO05D004909 1.5e-36 157.5 280 38.6
Peaxi162Scf00113g00410 Petunia axillaris HOM05D004232 ORTHO05D004909 2.0e-36 157.1 278 39.2
Aqoxy7G03502 Aquilegia oxysepala HOM05D004232 ORTHO05D004909 4.4e-36 156.0 272 40.1
AL2G40720 Arabidopsis lyrata HOM05D004232 ORTHO05D004909 4.4e-36 156.0 274 43.1
PGSC0003DMG400023181 Solanum tuberosum HOM05D004232 ORTHO05D004909 7.4e-36 155.2 272 39.0
Psat4g032960 Pisum sativum HOM05D004232 ORTHO05D004909 9.7e-36 154.8 266 41.0
Sp5g35040 Schrenkiella parvula HOM05D004232 ORTHO05D004909 9.7e-36 154.8 282 38.7
HanXRQChr05g0141511 Helianthus annuus HOM05D004232 ORTHO05D004909 1.3e-35 154.5 273 38.8
Lsat_1_v5_gn_8_77581 Lactuca sativa HOM05D004232 ORTHO05D004909 1.3e-35 154.5 291 38.1
Nitab4.5_0000700g0080 Nicotiana tabacum HOM05D004232 ORTHO05D004909 1.3e-35 154.5 274 40.1
SGA_v2.0_scaffold387G50524 Striga asiatica HOM05D004232 ORTHO05D004909 2.2e-35 153.7 288 37.5
AT1G80710 Arabidopsis thaliana HOM05D004232 ORTHO05D004909 6.3e-35 152.1 270 41.5
BcaC08g47551 Brassica carinata HOM05D004232 ORTHO05D004909 6.3e-35 152.1 280 40.4
BolC6t40394H Brassica oleracea HOM05D004232 ORTHO05D004909 6.3e-35 152.1 280 40.4
TPR.G15784 Trifolium pratense HOM05D004232 ORTHO05D004909 6.3e-35 152.1 266 41.4
Glyma.13G156300 Glycine max HOM05D004232 ORTHO05D004909 4.1e-34 149.4 263 40.3
Cc06_g23430 Coffea canephora HOM05D004232 ORTHO05D004909 9.1e-34 148.3 277 37.5
Migut.K00358 Erythranthe guttata HOM05D004232 ORTHO05D004909 1.2e-33 147.9 275 38.5
Carub.0002s2684 Capsella rubella HOM05D004232 ORTHO05D004909 1.6e-33 147.5 266 41.0
Sopen02g003100 Solanum pennellii HOM05D004232 ORTHO05D004909 2.0e-33 147.1 272 37.5
Glyma.17G103900 Glycine max HOM05D004232 ORTHO05D004909 2.6e-33 146.7 264 39.4
Rhsim01G0048900 Rhododendron simsii HOM05D004232 ORTHO05D004909 4.5e-33 146.0 278 36.7
A07p44980 Brassica napus HOM05D004232 ORTHO05D004909 5.9e-33 145.6 286 37.1
Solyc02g014460.4 Solanum lycopersicum HOM05D004232 ORTHO05D004909 1.0e-32 144.8 272 37.1
ECA236G0371 Erigeron canadensis HOM05D004232 ORTHO05D004909 1.7e-32 144.1 271 38.4
Aqoxy7G03504 Aquilegia oxysepala HOM05D004232 ORTHO05D004909 3.8e-32 142.9 272 37.9
BraA07t32003Z Brassica rapa HOM05D004232 ORTHO05D004909 5.0e-32 142.5 300 36.3
Cc06_g23400 Coffea canephora HOM05D004232 ORTHO05D004909 8.5e-32 141.7 277 37.2
Dinv42900 Davidia involucrata HOM05D004232 ORTHO05D004909 8.5e-32 141.7 269 37.2
Dinv43201 Davidia involucrata HOM05D004232 ORTHO05D004909 8.5e-32 141.7 269 37.2
Prupe.7G257900 Prunus persica HOM05D004232 ORTHO05D004909 1.1e-31 141.4 175 50.9
Rhsim01G0048600 Rhododendron simsii HOM05D004232 ORTHO05D004909 2.5e-31 140.2 280 36.8
Lj4g0017422 Lotus japonicus HOM05D004232 ORTHO05D004909 4.2e-31 139.4 262 38.2
MSTRG.26306 Avicennia marina HOM05D004232 ORTHO05D004909 1.2e-30 137.9 276 35.9
Nn2g12267 Nelumbo nucifera HOM05D004232 ORTHO05D004909 1.2e-30 137.9 371 32.9
Hund21619 Selenicereus undatus HOM05D004232 ORTHO05D004909 1.2e-30 137.9 281 36.3
Phvul.003G175900 Phaseolus vulgaris HOM05D004232 ORTHO05D004909 2.7e-30 136.7 265 39.6
Cpa.g.sc46.107 Carica papaya HOM05D004232 ORTHO05D004909 8.0e-30 135.2 146 56.2
Lalb_Chr07g0179621 Lupinus albus HOM05D004232 ORTHO05D004909 1.0e-29 134.8 273 39.6
PSO063G1432 Papaver somniferum HOM05D004232 ORTHO05D004909 3.0e-29 133.3 273 36.6
GSVIVG01001050001 Vitis vinifera HOM05D004232 ORTHO05D004909 5.2e-29 132.5 275 36.4
Nn8g39758 Nelumbo nucifera HOM05D004232 ORTHO05D004909 2.6e-28 130.2 363 30.0
Glyma.13G156200 Glycine max HOM05D004232 ORTHO05D004909 5.7e-28 129.0 262 37.8
BcaC08g47552 Brassica carinata HOM05D004232 ORTHO05D004909 9.7e-28 128.3 269 36.4
BolC6t40395H Brassica oleracea HOM05D004232 ORTHO05D004909 9.7e-28 128.3 269 36.4
DCAR_019365 Daucus carota HOM05D004232 ORTHO05D004909 9.7e-28 128.3 284 35.2
ECA236G3428 Erigeron canadensis HOM05D004232 ORTHO05D004909 9.7e-28 128.3 270 37.0
EL10Ac1g00573 Beta vulgaris HOM05D004232 ORTHO05D004909 1.3e-27 127.9 272 34.9
VMungo1215G2079 Vigna mungo HOM05D004232 ORTHO05D004909 2.8e-27 126.7 276 37.0
unitig_52.g17569 Utricularia gibba HOM05D004232 ORTHO05D004909 3.7e-27 126.3 288 34.4
Ah.06g190350 Amaranthus hybridus HOM05D004232 ORTHO05D001990 1.1e-26 124.8 272 34.9
COL.COLO4_17524 Corchorus olitorius HOM05D004232 ORTHO05D004909 2.4e-26 123.6 283 36.0
C09p21710 Brassica napus HOM05D004232 ORTHO05D004909 2.0e-25 120.6 271 33.2
BolC9t55076H Brassica oleracea HOM05D004232 ORTHO05D004909 2.0e-25 120.6 271 33.2
BcaC04g22248 Brassica carinata HOM05D004232 ORTHO05D004909 3.5e-25 119.8 271 33.2
CANSAT11G0555 Cannabis sativa HOM05D004232 ORTHO05D004909 5.9e-25 119.0 310 31.0
FAN23G0432 Fragaria x ananassa HOM05D004232 ORTHO05D004909 1.3e-24 117.9 234 35.0
Oeu051700.1 Olea europaea HOM05D004232 ORTHO05D004909 1.7e-24 117.5 216 41.7
CARHR073800 Cardamine hirsuta HOM05D004232 ORTHO05D004909 1.1e-23 114.8 275 31.3
AUR62000901 Chenopodium quinoa HOM05D004232 ORTHO05D004909 2.5e-23 113.6 269 33.5
Lsat_1_v5_gn_8_59400 Lactuca sativa HOM05D004232 ORTHO05D004909 2.5e-23 113.6 272 32.7
AUR62005074 Chenopodium quinoa HOM05D004232 ORTHO05D004909 1.2e-22 111.3 268 34.7
COL.COLO4_18748 Corchorus olitorius HOM05D004232 ORTHO05D004909 1.6e-22 110.9 59 86.4
TWI63G0539 Tripterygium wilfordii HOM05D004232 ORTHO05D004909 2.1e-22 110.5 282 31.6
HPP92_023808 Vanilla planifolia HOM05D004232 ORTHO05D004909 2.3e-21 107.1 279 31.2
CSS0018310 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 1.2e-20 104.8 288 31.6
Eucgr.C00403 Eucalyptus grandis HOM05D004232 ORTHO05D004909 1.1e-18 98.2 207 32.9
Ah.12g062460 Amaranthus hybridus HOM05D004232 ORTHO05D004909 4.1e-18 96.3 276 29.0
A09p17420 Brassica napus HOM05D004232 ORTHO05D004909 5.4e-18 95.9 264 29.9
QL05p007856 Quercus lobata HOM05D004232 ORTHO05D004909 9.1e-18 95.1 149 45.0
Migut.G00058 Erythranthe guttata HOM05D004232 ORTHO05D004909 3.5e-17 93.2 291 29.6
Cpa.g.sc46.108 Carica papaya HOM05D004232 ORTHO05D004909 7.7e-17 92.0 93 55.9
TPR.G15793 Trifolium pratense HOM05D004232 ORTHO05D004909 2.9e-16 90.1 281 30.2
ATR0629G133 Amborella trichopoda HOM05D004232 ORTHO05D004909 1.1e-15 88.2 258 28.7
ATR0629G116 Amborella trichopoda HOM05D004232 ORTHO05D004909 3.2e-15 86.7 268 27.2
CSS0034823 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 3.6e-14 83.2 196 31.6
Medtr4g116910 Medicago truncatula HOM05D004232 ORTHO05D004909 4.7e-14 82.8 261 29.5
CSS0031603 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 8.0e-14 82.0 296 29.7
Lj9A711T51 Lonicera japonica HOM05D004232 ORTHO05D004909 1.0e-13 81.6 201 32.8
CSS0000460 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 4.0e-13 79.7 207 30.4
Rhsim01G0048700 Rhododendron simsii HOM05D004232 ORTHO05D004909 6.8e-13 79.0 208 29.8
C06p53770 Brassica napus HOM05D004232 ORTHO05D004909 2.6e-12 77.0 130 43.8
COL.COLO4_18744 Corchorus olitorius HOM05D004232 ORTHO05D004909 7.5e-12 75.5 46 93.5
SEGI_24126 Sequoiadendron giganteum HOM05D004232 ORTHO05D004909 7.5e-12 75.5 271 25.1
Rhsim01G0048800 Rhododendron simsii HOM05D004232 ORTHO05D004909 1.7e-11 74.3 205 29.3
Dinv41413 Davidia involucrata HOM05D004232 ORTHO05D004909 2.8e-11 73.6 74 44.6
VMungo1215G1753 Vigna mungo HOM05D004232 ORTHO05D004909 3.1e-10 70.1 75 61.3
C02p46280 Brassica napus HOM05D000783 ORTHO05D000705 2.0e-09 67.4 77 41.6
HanXRQChr12g0386031 Helianthus annuus HOM05D004232 ORTHO05D004909 3.8e-08 63.2 53 47.2
Actinidia04270 Actinidia chinensis HOM05D004232 ORTHO05D004909 1.5e-07 61.2 62 45.2
SEGI_07783 Sequoiadendron giganteum HOM05D004232 ORTHO05D004909 3.3e-07 60.1 261 23.8


User provided reference genes

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