Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_18713 Corchorus olitorius HOM05D003500 ORTHO05D003919 3.7e-85 318.2 161 100.0
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 4.6e-35 151.8 292 40.4
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 9.0e-31 137.5 292 38.7
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 3.2e-28 129.0 294 35.7
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 2.7e-27 125.9 293 35.5
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 7.9e-27 124.4 241 39.4
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 2.2e-24 116.3 286 36.4
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 4.2e-12 75.5 288 28.1
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 9.4e-12 74.3 250 28.4
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.4e-10 70.5 91 47.3
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 1.8e-10 70.1 265 26.4
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 2.0e-09 66.6 45 68.9
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 2.0e-09 66.6 287 26.5
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 2.2e-08 63.2 292 27.4
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 3.7e-08 62.4 56 58.9
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 3.7e-08 62.4 47 61.7
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 4.8e-08 62.0 56 55.4
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 8.2e-08 61.2 56 55.4
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 8.2e-08 61.2 285 26.3
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 1.1e-07 60.8 60 51.7
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 1.4e-07 60.5 98 42.9
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 1.8e-07 60.1 43 55.8
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 1.8e-07 60.1 75 42.7
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.4e-07 59.7 88 43.2
Cpa.g.sc205.12 Carica papaya HOM05D003500 ORTHO05D003919 2.4e-07 59.7 61 54.1
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 3.1e-07 59.3 263 26.6
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 5.3e-07 58.5 57 49.1
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.6e-06 57.0 246 26.4
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.6e-06 57.0 263 26.2
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.6e-06 56.2 85 43.5
Peaxi162Scf00105g00615 Petunia axillaris HOM05D003500 ORTHO05D003919 2.6e-06 56.2 55 58.2
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 2.6e-06 56.2 110 37.3
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 3.5e-06 55.8 229 27.1
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 3.5e-06 55.8 229 27.1
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 7.7e-06 54.7 286 24.5


User provided reference genes

Program Settings