Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.1e-93 346.7 177 100.0
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 1.8e-56 223.0 163 73.0
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 8.3e-54 214.2 163 69.3
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 1.9e-50 203.0 119 80.7
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 3.3e-50 202.2 119 79.8
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 5.6e-50 201.4 119 79.8
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 9.6e-50 200.7 119 79.8
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 2.1e-49 199.5 162 64.8
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.8e-49 199.1 162 64.2
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 4.7e-49 198.4 119 77.3
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 1.8e-48 196.4 119 79.8
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 3.1e-48 195.7 121 75.2
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.2e-47 193.7 119 77.3
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.2e-47 193.7 121 74.4
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.5e-47 193.4 121 75.2
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.0e-47 193.0 121 76.9
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 2.0e-47 193.0 119 77.3
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.6e-47 192.6 121 76.0
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 4.4e-47 191.8 121 74.4
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 9.9e-47 190.7 121 75.2
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 9.9e-47 190.7 132 69.7
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.7e-46 189.9 121 75.2
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 2.2e-46 189.5 121 76.0
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.9e-46 189.1 119 75.6
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.1e-45 187.2 128 72.7
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.4e-45 186.8 121 75.2
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 4.2e-45 185.3 119 73.9
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 5.4e-45 184.9 121 74.4
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 5.4e-45 184.9 121 74.4
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 9.3e-45 184.1 121 73.6
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.6e-44 183.3 139 66.2
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 2.1e-44 183.0 119 70.6
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.7e-44 182.6 119 70.6
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.7e-44 182.6 119 70.6
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 2.7e-44 182.6 137 67.2
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 3.5e-44 182.2 121 67.8
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 4.6e-44 181.8 119 72.3
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 4.6e-44 181.8 119 71.4
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 1.0e-43 180.6 119 69.7
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 3.0e-43 179.1 119 73.9
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 3.0e-43 179.1 119 73.9
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.6e-43 177.9 119 71.4
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.1e-42 177.2 119 68.1
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.5e-42 176.8 119 68.1
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 2.5e-42 176.0 119 68.1
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 3.3e-42 175.6 120 70.0
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.3e-42 175.6 119 68.9
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.3e-42 175.6 119 68.9
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 5.6e-42 174.9 119 68.1
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 9.6e-42 174.1 119 69.7
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 9.6e-42 174.1 121 66.1
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-41 173.7 119 68.1
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.3e-41 173.7 119 68.9
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.3e-41 173.7 109 74.3
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 1.6e-41 173.3 119 69.7
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.6e-41 173.3 119 67.2
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 2.8e-41 172.6 119 67.2
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.8e-41 172.6 119 64.7
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 3.6e-41 172.2 119 67.2
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 4.8e-41 171.8 119 68.9
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 4.8e-41 171.8 119 67.2
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 4.8e-41 171.8 121 67.8
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 6.2e-41 171.4 119 68.1
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 6.2e-41 171.4 119 68.9
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 6.2e-41 171.4 119 65.5
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 6.2e-41 171.4 120 68.3
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 8.1e-41 171.0 119 67.2
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.4e-40 170.2 119 67.2
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.4e-40 169.5 119 66.4
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 2.4e-40 169.5 119 67.2
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 5.3e-40 168.3 119 66.4
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.3e-40 168.3 120 64.2
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 6.9e-40 167.9 119 66.4
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 4.9e-38 161.8 119 63.0
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.1e-37 160.6 121 61.2
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 6.0e-36 154.8 109 64.2
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.0e-35 154.1 133 57.1
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 1.0e-35 154.1 114 61.4
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 2.5e-34 149.4 118 58.5
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 4.3e-34 148.7 99 72.7
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.1e-33 146.4 121 62.0
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 2.8e-33 146.0 125 59.2
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 4.8e-33 145.2 119 58.8
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 6.2e-33 144.8 121 62.0
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 1.1e-32 144.1 97 70.1
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 1.8e-32 143.3 131 53.4
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 5.3e-32 141.7 103 68.0
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 2.6e-31 139.4 149 49.7
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.5e-31 138.7 86 77.9
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.7e-30 136.7 132 47.7
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 2.2e-30 136.3 95 69.5
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 2.4e-29 132.9 119 56.3
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 4.2e-29 132.1 198 38.9
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.1e-28 129.8 118 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 4.6e-28 128.6 119 50.4
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.5e-26 123.6 86 66.3
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.5e-26 123.6 86 66.3
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 3.3e-26 122.5 119 47.1
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 5.6e-26 121.7 86 65.1
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-25 120.6 143 47.6
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.6e-25 120.2 78 70.5
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.1e-24 117.5 119 52.9
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.8e-24 116.7 82 64.6
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 2.6e-23 112.8 81 64.2
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 2.5e-21 106.3 106 45.3
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 5.5e-21 105.1 68 67.6
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.6e-20 103.6 59 81.4
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 6.0e-20 101.7 118 42.4
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.9e-18 96.7 59 72.9
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 4.3e-18 95.5 103 49.5
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.2e-14 83.2 103 50.5
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.6e-12 77.0 118 37.3
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.5e-10 69.7 57 54.4
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 6.3e-09 65.1 40 75.0
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 3.4e-07 59.3 120 30.8
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.5e-07 58.9 33 78.8


User provided reference genes

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