Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.5e-80 302.8 146 100.0
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 3.2e-59 231.9 148 77.0
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 4.3e-48 194.9 152 67.1
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.1e-47 192.6 152 65.8
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.1e-46 190.3 152 67.8
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 5.3e-46 188.0 152 65.1
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 5.3e-46 188.0 152 65.1
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 3.4e-45 185.3 152 65.1
Gohir.A01G042800 Gossypium hirsutum HOM05D008142 ORTHO05D009674 7.6e-45 184.1 152 66.4
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.9e-44 182.2 151 64.2
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 3.8e-44 181.8 152 64.5
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 8.4e-44 180.6 152 65.8
Gorai.002G040900 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.1e-43 180.3 152 62.5
Gohir.A01G042900 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.4e-43 179.9 151 63.6
Gohir.D01G033500 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.4e-43 179.9 151 63.6
Gohir.A01G043200 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.2e-42 176.8 151 61.6
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 4.7e-26 121.7 163 47.9
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 1.6e-18 96.7 161 45.3
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.6e-18 95.5 172 37.2
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.4e-17 93.6 159 44.7
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.4e-17 93.6 172 38.4
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.8e-17 93.2 172 36.6
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 6.7e-17 91.3 171 38.6
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 2.6e-16 89.4 157 42.0
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 4.4e-16 88.6 167 37.7
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 9.7e-16 87.4 134 43.3
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.7e-15 86.7 160 38.1
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 4.8e-15 85.1 160 39.4
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 6.3e-15 84.7 128 42.2
COL.COLO4_17430 Corchorus olitorius HOM05D008142 ORTHO05D009674 3.1e-14 82.4 147 43.5
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 4.1e-14 82.0 143 42.7
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.6e-13 80.1 142 39.4
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 1.6e-13 80.1 149 40.3
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.6e-13 79.3 140 37.1
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 1.7e-12 76.6 147 38.1
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 6.5e-12 74.7 143 44.1
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 8.5e-12 74.3 143 43.4
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 8.5e-12 74.3 143 43.4
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 1.1e-11 73.9 148 40.5
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 1.9e-11 73.2 166 36.1
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 3.2e-11 72.4 156 39.1
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 3.2e-11 72.4 143 42.7
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 3.2e-11 72.4 173 38.7
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 5.5e-11 71.6 152 36.8
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 7.2e-11 71.2 149 34.2
Thecc.07G144300 Theobroma cacao HOM05D023069 ORTHO05D009674 1.2e-10 70.5 144 36.8
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 1.6e-10 70.1 164 36.6
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 3.6e-10 68.9 146 34.9
Ciclev10022628m.g Citrus clementina HOM05D008142 ORTHO05D009674 4.7e-10 68.6 146 39.7
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 1.0e-09 67.4 153 32.7
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 1.0e-09 67.4 178 32.6
Gorai.002G040400 Gossypium raimondii HOM05D023069 ORTHO05D009674 2.3e-09 66.2 126 36.5
Gohir.D01G033300 Gossypium hirsutum HOM05D023069 ORTHO05D009674 4.0e-09 65.5 126 36.5
COL.COLO4_17431 Corchorus olitorius HOM05D023069 ORTHO05D009674 1.2e-08 63.9 122 37.7
MSTRG.6725 Avicennia marina HOM05D008142 ORTHO05D009674 5.7e-08 61.6 150 36.0
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 7.5e-08 61.2 158 32.9
Gohir.A01G042700 Gossypium hirsutum HOM05D023069 ORTHO05D009674 7.5e-08 61.2 126 32.5
Medtr2g071750 Medicago truncatula HOM05D012055 ORTHO05D014183 7.5e-08 61.2 145 31.7
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 1.3e-07 60.5 167 31.7
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 1.3e-07 60.5 143 35.7
Medtr2g071760 Medicago truncatula HOM05D012055 ORTHO05D014183 1.7e-07 60.1 144 29.9
Cpa.g.sc714.2 Carica papaya HOM05D008142 ORTHO05D009674 2.2e-07 59.7 99 42.4
TAR627G0610 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.2e-07 59.7 92 40.2
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 3.7e-07 58.9 166 30.7
Glyma.15G247900 Glycine max HOM05D010689 ORTHO05D012855 6.3e-07 58.2 134 37.3
Phvul.005G061900 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 1.1e-06 57.4 131 38.9
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 1.4e-06 57.0 140 34.3
Phvul.005G061700 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 1.8e-06 56.6 128 35.9
Glyma.13G260100 Glycine max HOM05D010689 ORTHO05D012855 4.1e-06 55.5 141 36.2
Oeu020030.1 Olea europaea HOM05D008142 ORTHO05D009674 4.1e-06 55.5 137 39.4
Ca_03397_v3 Cicer arietinum L. HOM05D012055 ORTHO05D014183 7.0e-06 54.7 150 31.3
Glyma.13G260401 Glycine max HOM05D010689 ORTHO05D012855 7.0e-06 54.7 106 36.8
Lalb_Chr25g0285461 Lupinus albus HOM05D012055 ORTHO05D014183 7.0e-06 54.7 133 27.1
Glyma.15G247800 Glycine max HOM05D010689 ORTHO05D012855 9.1e-06 54.3 133 36.8
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 9.1e-06 54.3 173 28.3


User provided reference genes

Program Settings