Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_17430 Corchorus olitorius HOM05D008142 ORTHO05D009674 6.9e-72 273.9 137 100.0
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 3.6e-36 155.2 152 60.5
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 4.7e-20 101.7 144 47.2
Gorai.002G040900 Gossypium raimondii HOM05D008142 ORTHO05D009674 5.3e-16 88.2 127 47.2
Gohir.A01G042900 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.6e-15 86.7 149 40.3
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 2.0e-15 86.3 147 40.8
Gohir.D01G033500 Gossypium hirsutum HOM05D008142 ORTHO05D009674 5.9e-15 84.7 149 40.3
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 7.7e-15 84.3 128 43.0
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 7.7e-15 84.3 128 43.8
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.3e-14 83.6 147 43.5
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.3e-14 83.6 132 42.4
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 5.0e-14 81.6 128 42.2
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.5e-13 80.1 128 41.4
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.9e-13 79.7 148 39.2
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.9e-13 79.7 128 41.4
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.5e-13 79.3 128 41.4
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 3.2e-13 79.0 148 39.2
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 4.2e-13 78.6 148 39.9
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 7.2e-13 77.8 146 40.4
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 9.4e-13 77.4 168 34.5
Gohir.A01G042800 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.2e-12 77.0 148 39.2
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 2.1e-12 76.3 139 42.4
Gohir.A01G043200 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.1e-12 76.3 127 43.3
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 4.7e-12 75.1 141 41.8
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 8.0e-12 74.3 143 38.5
Ciclev10022628m.g Citrus clementina HOM05D008142 ORTHO05D009674 8.0e-12 74.3 146 39.7
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 8.0e-12 74.3 135 42.2
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 1.2e-10 70.5 155 38.1
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 9.8e-10 67.4 111 43.2
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.7e-09 66.6 147 36.1
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.7e-09 66.6 151 34.4
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 2.2e-09 66.2 149 35.6
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 1.1e-08 63.9 141 37.6
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 1.4e-08 63.5 143 37.1
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.4e-08 63.5 157 33.1
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.4e-08 63.5 157 33.1
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.4e-08 63.5 147 34.0
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 1.8e-08 63.2 138 37.0
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 2.4e-08 62.8 137 33.6
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.1e-08 62.4 140 41.4
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 4.1e-08 62.0 121 36.4
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.6e-07 60.1 148 37.8
DCAR_017570 Daucus carota HOM05D019704 ORTHO05D009674 2.7e-07 59.3 141 33.3
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 2.7e-07 59.3 139 29.5
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 3.5e-07 58.9 139 29.5
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 3.5e-07 58.9 139 29.5
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 4.5e-07 58.5 162 35.2
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 7.7e-07 57.8 139 29.5
Cpa.g.sc714.2 Carica papaya HOM05D008142 ORTHO05D009674 1.7e-06 56.6 114 41.2
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 2.9e-06 55.8 147 34.7
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 3.8e-06 55.5 161 32.3
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 6.6e-06 54.7 140 30.7
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 6.6e-06 54.7 144 36.1


User provided reference genes

Program Settings