Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.6e-269 932.2 481 100.0
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 7.8e-163 577.8 335 88.4
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.3e-61 240.7 319 48.6
COL.COLO4_17213 Corchorus olitorius HOM05D008239 ORTHO05D009800 7.3e-52 209.1 148 73.6
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 5.8e-33 146.4 351 32.2
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-31 141.7 318 33.6
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 7.9e-30 136.0 339 28.0
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 1.3e-29 135.2 317 30.6
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 5.1e-29 133.3 231 37.7
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-26 125.2 315 29.5
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 2.6e-25 120.9 275 31.6
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 3.4e-25 120.6 282 31.9
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 4.5e-25 120.2 275 33.8
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 4.5e-25 120.2 267 33.3
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-23 115.2 249 29.3
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-23 113.6 266 30.8
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 7.1e-23 112.8 323 27.2
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 2.7e-22 110.9 269 30.5
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 4.6e-22 110.2 296 28.7
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 6.0e-22 109.8 337 28.8
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-21 108.2 274 31.4
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.8e-21 108.2 283 32.5
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-20 105.5 244 32.4
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-20 105.1 281 31.7
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 9.6e-20 102.4 277 31.4
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 6.2e-19 99.8 327 28.4
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-17 95.5 186 30.1
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.4e-17 94.0 198 31.3
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 7.6e-17 92.8 181 33.7
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 6.5e-16 89.7 353 25.8
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-15 88.6 156 31.4
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 7.1e-15 86.3 198 29.8
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 9.3e-15 85.9 257 30.0
COL.COLO4_27100 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.7e-14 84.3 232 33.2
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 1.0e-13 82.4 238 30.3
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 6.7e-13 79.7 294 27.6
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-12 78.2 144 36.8
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 9.6e-12 75.9 256 24.6
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.1e-11 74.7 339 22.7
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 3.7e-11 73.9 148 33.1
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.8e-11 73.6 244 24.6
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 8.2e-11 72.8 141 31.2
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 8.2e-11 72.8 236 29.2
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 3.1e-10 70.9 234 26.1
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.1e-10 70.5 150 31.3
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.2e-09 68.9 233 26.6
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.6e-09 67.8 280 23.2
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.9e-09 66.6 121 36.4
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 7.6e-09 66.2 106 37.7
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 7.6e-09 66.2 291 23.7
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 1.0e-08 65.9 203 26.6
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 1.7e-08 65.1 169 27.8
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 3.8e-08 63.9 296 23.3
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.4e-08 62.8 245 23.7
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.4e-08 62.8 163 28.8
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-07 62.4 276 26.1
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 1.4e-07 62.0 203 23.2
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 4.2e-07 60.5 208 25.0
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 4.2e-07 60.5 200 29.5
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 9.3e-07 59.3 118 31.4
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 9.3e-07 59.3 152 30.3
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-06 58.9 265 23.4
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 7.9e-06 56.2 288 22.9


User provided reference genes

Program Settings