Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 3.9e-57 224.9 147 100.0
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 3.7e-23 112.1 149 46.3
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 8.3e-23 110.9 149 45.6
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 9.1e-22 107.5 145 45.5
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.4e-14 83.6 149 42.3
Thecc.03G229800 Theobroma cacao HOM05D007324 ORTHO05D007884 1.4e-14 83.6 145 40.7
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 3.1e-14 82.4 139 41.7
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 4.1e-14 82.0 144 40.3
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 7.8e-13 77.8 146 38.4
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 7.8e-13 77.8 146 38.4
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 1.3e-12 77.0 144 41.7
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.7e-12 76.6 146 39.0
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 2.9e-12 75.9 104 48.1
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 5.0e-12 75.1 144 37.5
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 5.0e-12 75.1 144 37.5
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 8.6e-12 74.3 146 39.7
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.9e-11 73.2 157 36.3
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 3.3e-11 72.4 146 37.7
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 5.6e-11 71.6 147 38.1
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 7.3e-11 71.2 87 52.9
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 7.3e-11 71.2 146 39.7
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 2.1e-10 69.7 102 48.0
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 2.1e-10 69.7 96 43.8
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 2.1e-10 69.7 102 43.1
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 2.1e-10 69.7 96 43.8
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 3.6e-10 68.9 144 39.6
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 1.0e-09 67.4 143 36.4
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 1.8e-09 66.6 94 45.7
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 3.1e-09 65.9 102 46.1
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 3.1e-09 65.9 102 46.1
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 3.1e-09 65.9 141 36.9
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 5.2e-09 65.1 102 46.1
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 5.2e-09 65.1 88 46.6
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 1.2e-08 63.9 92 42.4
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 1.2e-08 63.9 151 35.8
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 1.5e-08 63.5 88 46.6
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 3.4e-08 62.4 147 34.7
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 4.4e-08 62.0 154 36.4
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 4.4e-08 62.0 139 36.0
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 4.4e-08 62.0 141 33.3
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 7.5e-08 61.2 102 45.1
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 7.5e-08 61.2 141 39.7
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 7.5e-08 61.2 74 50.0
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 7.5e-08 61.2 90 45.6
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 9.8e-08 60.8 88 44.3
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 1.3e-07 60.5 110 38.2
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.7e-07 60.1 100 41.0
AL1G48030 Arabidopsis lyrata HOM05D007324 ORTHO05D007884 2.2e-07 59.7 101 57.4
Nn1g00546 Nelumbo nucifera HOM05D007324 ORTHO05D007884 3.7e-07 58.9 92 56.5
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 6.4e-07 58.2 75 45.3
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 1.1e-06 57.4 95 43.2
Sp1g28340 Schrenkiella parvula HOM05D007324 ORTHO05D007884 1.1e-06 57.4 107 44.9
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 1.1e-06 57.4 144 34.0
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 1.4e-06 57.0 143 46.9
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 1.9e-06 56.6 97 40.2
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.4e-06 56.2 146 41.8
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 2.4e-06 56.2 76 56.6
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 3.2e-06 55.8 69 44.9
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 3.2e-06 55.8 132 36.4
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 3.2e-06 55.8 88 42.0
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 5.4e-06 55.1 69 46.4
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 5.4e-06 55.1 139 45.3
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 5.4e-06 55.1 139 45.3
EL10Ac5g12140 Beta vulgaris HOM05D028673 ORTHO05D031676 7.0e-06 54.7 145 51.7
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 7.0e-06 54.7 144 31.9
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 7.0e-06 54.7 143 32.2
Hund11251 Selenicereus undatus HOM05D007324 ORTHO05D007884 7.0e-06 54.7 83 61.4
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 9.2e-06 54.3 88 46.6
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 9.2e-06 54.3 142 40.1


User provided reference genes

Program Settings