Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16922 Corchorus olitorius HOM05D000007 ORTHO05D000039 5.7e-126 454.1 210 100.0
COL.COLO4_23737 Corchorus olitorius HOM05D000007 ORTHO05D000039 4.2e-36 155.6 228 45.2
COL.COLO4_23751 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.3e-34 150.6 226 42.0
COL.COLO4_23744 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.5e-33 147.1 224 43.3
Duzib114G0947 Durio zibethinus HOM05D000007 ORTHO05D000039 4.3e-33 145.6 224 42.0
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 3.1e-31 139.4 230 38.7
COL.COLO4_23742 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.9e-28 130.2 190 42.1
COL.COLO4_23746 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.3e-26 123.2 216 39.8
Thecc.10G092800 Theobroma cacao HOM05D000007 ORTHO05D000039 3.9e-26 122.5 227 36.1
Duzib114G0469 Durio zibethinus HOM05D000007 ORTHO05D000039 1.0e-21 107.8 191 39.8
COL.COLO4_16336 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.4e-20 104.0 207 29.5
COL.COLO4_36334 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.4e-20 104.0 207 29.5
COL.COLO4_23745 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.7e-16 90.5 187 36.4
COL.COLO4_23482 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.8e-16 89.7 237 31.2
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.5e-14 84.0 224 31.2
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.2e-13 80.1 225 29.8
COL.COLO4_23510 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.9e-13 79.7 232 29.7
Duzib114G0799 Durio zibethinus HOM05D000007 ORTHO05D000039 5.0e-13 79.0 146 33.6
COL.COLO4_23481 Corchorus olitorius HOM05D000007 ORTHO05D000039 6.5e-13 78.6 229 29.7
Peaxi162Scf00658g00067 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-12 77.8 221 28.1
Lj2C989T3 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-11 72.8 232 27.6
CAN.G475.39 Capsicum annuum HOM05D000007 ORTHO05D000039 1.8e-10 70.5 208 30.8
COL.COLO4_23748 Corchorus olitorius HOM05D000007 ORTHO05D000039 3.9e-10 69.3 122 41.0
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.8e-10 68.2 227 30.0
Lj2C989T8 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-09 67.4 233 26.2
Ciclev10027518m.g Citrus clementina HOM05D000007 ORTHO05D000039 3.3e-09 66.2 219 26.9
Lj5C842T1 Lonicera japonica HOM05D000007 ORTHO05D000039 7.4e-09 65.1 200 27.5
PGSC0003DMG400024836 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.7e-09 64.7 227 29.5
COL.COLO4_23736 Corchorus olitorius HOM05D023215 ORTHO05D000039 1.3e-08 64.3 77 51.9
Nitab4.5_0006627g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.3e-08 64.3 227 25.6
Actinidia25575 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.8e-08 63.2 221 26.7
COL.COLO4_23511 Corchorus olitorius HOM05D000007 ORTHO05D000039 8.2e-08 61.6 119 37.8
Lj4g0007807 Lotus japonicus HOM05D000007 ORTHO05D000039 1.8e-07 60.5 222 27.5
QL04p019060 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-07 58.5 216 25.9
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 9.1e-07 58.2 225 27.6
Rhsim09G0013700 Rhododendron simsii HOM05D000007 ORTHO05D000039 9.1e-07 58.2 219 28.8
Haze_02829 Corylus avellana HOM05D000007 ORTHO05D000039 3.5e-06 56.2 190 25.8
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-06 55.8 225 26.2
Gorai.010G208700 Gossypium raimondii HOM05D000007 ORTHO05D000039 5.9e-06 55.5 167 29.3


User provided reference genes

Program Settings