Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 6.2e-169 597.4 312 100.0
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 1.5e-143 513.1 312 86.2
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 2.1e-140 502.7 312 85.6
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 4.6e-140 501.5 312 83.3
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 5.6e-138 494.6 314 83.1
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 8.5e-126 454.1 312 76.3
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 1.9e-125 453.0 314 76.1
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 4.2e-125 451.8 312 75.3
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 5.5e-125 451.4 312 75.3
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 1.6e-124 449.9 312 75.6
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 1.0e-123 447.2 313 76.4
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 1.3e-123 446.8 313 76.7
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 6.7e-123 444.5 313 75.1
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 8.7e-123 444.1 312 73.1
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.9e-122 443.0 312 74.0
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 4.3e-122 441.8 312 73.7
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 5.7e-122 441.4 312 74.7
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.6e-121 439.9 312 73.7
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 1.6e-121 439.9 312 73.4
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 2.2e-121 439.5 277 79.1
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 2.2e-121 439.5 312 74.0
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 2.2e-121 439.5 312 73.4
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 3.7e-121 438.7 312 74.0
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 4.8e-121 438.3 312 73.1
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 6.3e-121 438.0 312 73.7
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 1.1e-120 437.2 312 72.4
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.4e-120 436.0 315 71.4
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 2.4e-120 436.0 312 75.0
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 3.1e-120 435.6 277 78.0
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 3.1e-120 435.6 312 73.7
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 3.1e-120 435.6 312 73.7
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 3.1e-120 435.6 312 73.4
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 5.3e-120 434.9 314 73.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 5.3e-120 434.9 314 73.2
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 5.3e-120 434.9 312 74.0
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 6.9e-120 434.5 313 73.5
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 9.0e-120 434.1 312 73.4
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 1.2e-119 433.7 340 68.8
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 1.2e-119 433.7 340 68.8
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 2.0e-119 433.0 312 72.4
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 2.0e-119 433.0 312 72.1
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 2.6e-119 432.6 316 73.7
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 2.6e-119 432.6 312 73.1
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 3.4e-119 432.2 312 72.4
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 3.4e-119 432.2 312 72.4
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 3.4e-119 432.2 312 72.4
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 7.7e-119 431.0 312 72.4
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 7.7e-119 431.0 312 72.1
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 7.7e-119 431.0 312 73.1
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 7.7e-119 431.0 312 72.8
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 1.3e-118 430.3 312 72.8
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.3e-118 430.3 312 72.8
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.7e-118 429.9 312 73.1
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.7e-118 429.9 320 72.2
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 2.2e-118 429.5 312 71.5
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 2.9e-118 429.1 312 72.4
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 3.8e-118 428.7 270 77.8
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 5.0e-118 428.3 312 73.4
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 8.5e-118 427.6 312 72.4
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 8.5e-118 427.6 312 73.1
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 1.4e-117 426.8 312 73.1
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 1.9e-117 426.4 312 72.4
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 2.5e-117 426.0 312 73.1
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 2.5e-117 426.0 315 72.7
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 4.2e-117 425.2 312 71.8
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 5.5e-117 424.9 316 70.6
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 9.4e-117 424.1 318 72.6
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 9.4e-117 424.1 312 70.2
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 9.4e-117 424.1 312 70.2
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 1.6e-116 423.3 313 71.6
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 3.6e-116 422.2 312 72.1
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 6.1e-116 421.4 312 70.5
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 6.1e-116 421.4 271 75.3
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 7.9e-116 421.0 317 71.6
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 3.0e-115 419.1 317 70.0
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 3.9e-115 418.7 341 66.6
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 3.9e-115 418.7 316 69.3
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 6.7e-115 417.9 312 70.2
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 8.8e-115 417.5 316 69.9
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 3.7e-113 412.1 275 76.4
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 1.8e-112 409.8 312 67.6
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 7.7e-111 404.4 292 72.9
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 2.9e-110 402.5 332 65.7
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 6.5e-110 401.4 310 66.5
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 6.1e-108 394.8 321 65.1
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 6.7e-107 391.3 311 65.6
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 4.8e-105 385.2 312 67.0
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 4.8e-105 385.2 278 73.7
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 1.8e-104 383.3 331 64.4
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 2.0e-103 379.8 284 69.0
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.9e-102 375.9 237 83.1
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 3.2e-101 372.5 312 65.4
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 6.1e-100 368.2 330 62.7
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 1.8e-99 366.7 326 63.2
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 2.2e-97 359.8 352 58.5
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 4.1e-88 328.9 293 58.7
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 7.0e-88 328.2 272 63.2
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 8.0e-84 314.7 300 57.3
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 2.0e-82 310.1 240 70.0
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 3.4e-82 309.3 310 56.1
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.1e-80 302.8 237 68.4
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 8.6e-78 294.7 202 75.7
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 7.0e-72 275.0 266 57.9
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 1.3e-70 270.8 272 53.3
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 5.8e-66 255.4 212 67.5
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.2e-58 231.1 262 45.8
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.9e-56 223.8 192 65.6
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 7.1e-56 221.9 279 42.7
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 3.8e-49 199.5 322 41.6
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 3.5e-47 193.0 155 68.4
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 8.1e-44 181.8 312 37.5
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.4e-40 170.2 252 40.9
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 6.6e-38 162.2 182 54.4
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 9.6e-37 158.3 242 39.3
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 4.2e-32 142.9 116 62.9
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.5e-29 134.4 88 77.3
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 1.9e-29 134.0 214 39.7
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 2.8e-20 103.6 74 67.6
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 2.0e-18 97.4 93 58.1
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 7.9e-15 85.5 135 43.7
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 5.1e-14 82.8 78 55.1
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 1.3e-09 68.2 79 53.2
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 4.2e-08 63.2 57 47.4


User provided reference genes

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