Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16660 Corchorus olitorius HOM05D008133 ORTHO05D007254 0.0e+00 1134.4 588 100.0
COL.COLO4_22912 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.1e-38 165.6 184 50.5
COL.COLO4_24494 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.4e-33 147.9 500 30.4
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 6.2e-29 133.3 117 54.7
COL.COLO4_09268 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.8e-26 124.0 160 45.6
COL.COLO4_35386 Corchorus olitorius HOM05D008133 ORTHO05D009449 3.4e-19 100.9 516 24.2
COL.COLO4_17181 Corchorus olitorius HOM05D008183 ORTHO05D007254 9.0e-12 76.3 72 54.2
COL.COLO4_20835 Corchorus olitorius HOM05D000003 ORTHO05D000022 2.9e-10 71.2 117 41.0
COL.COLO4_30555 Corchorus olitorius HOM05D000003 ORTHO05D000167 6.5e-10 70.1 120 38.3
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.4e-10 69.7 118 33.1
COL.COLO4_37225 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.4e-10 69.7 115 40.0
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.1e-09 69.3 118 33.1
COL.COLO4_22232 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.1e-09 69.3 123 35.0
COL.COLO4_35856 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.1e-09 69.3 131 31.3
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 1.4e-09 68.9 118 39.0
COL.COLO4_17377 Corchorus olitorius HOM05D008133 ORTHO05D009449 3.2e-09 67.8 125 32.0
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.3e-09 66.2 118 39.0
CANSAT21G0505 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-08 65.1 118 36.4
COL.COLO4_24033 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.1e-08 65.1 187 29.4
Hma1.2p1_0225F.1_g094875 Hydrangea macrophylla HOM05D000003 ORTHO05D000167 2.7e-08 64.7 97 35.1
Hma1.2p1_0225F.1_g094890 Hydrangea macrophylla HOM05D000003 ORTHO05D000167 2.7e-08 64.7 97 35.1
COL.COLO4_20392 Corchorus olitorius HOM05D000003 ORTHO05D000167 3.5e-08 64.3 120 30.8
FvH4_1g29601 Fragaria vesca HOM05D000003 ORTHO05D000004 3.5e-08 64.3 120 35.0
RcHm_v2.0_Chr1g0323031 Rosa chinensis HOM05D011824 ORTHO05D017030 3.5e-08 64.3 119 34.5
Prupe.1G073500 Prunus persica HOM05D008133 ORTHO05D007254 7.9e-08 63.2 68 47.1
CANSAT56G0354 Cannabis sativa HOM05D000003 ORTHO05D000167 1.0e-07 62.8 118 36.4
COL.COLO4_04666 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.3e-07 62.4 120 36.7
COL.COLO4_28425 Corchorus olitorius HOM05D019761 ORTHO05D009449 1.8e-07 62.0 82 35.4
COL.COLO4_30449 Corchorus olitorius HOM05D001332 ORTHO05D007191 1.8e-07 62.0 92 33.7
COL.COLO4_24735 Corchorus olitorius HOM05D000261 ORTHO05D000004 2.3e-07 61.6 106 33.0
COL.COLO4_20537 Corchorus olitorius HOM05D013144 ORTHO05D000022 3.0e-07 61.2 65 49.2
Rhsim01G0110800 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.9e-07 60.8 135 34.8
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 3.9e-07 60.8 251 21.9
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 5.1e-07 60.5 206 30.1
Lj3g0003452 Lotus japonicus HOM05D000003 ORTHO05D000004 6.7e-07 60.1 122 32.0
COL.COLO4_15333 Corchorus olitorius HOM05D064659 ORTHO05D000022 8.7e-07 59.7 72 40.3
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 8.7e-07 59.7 65 44.6
RcHm_v2.0_Chr5g0016681 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-06 59.3 120 37.5
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-06 58.9 118 33.1
CANSAT11G2368 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 58.9 118 33.1
PSO210G1914 Papaver somniferum HOM05D003407 ORTHO05D001026 1.5e-06 58.9 143 28.0
COL.COLO4_16656 Corchorus olitorius HOM05D013144 ORTHO05D009449 1.9e-06 58.5 74 35.1
COL.COLO4_22231 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.9e-06 58.5 67 43.3
Duzib213G0982 Durio zibethinus HOM05D008133 ORTHO05D007254 1.9e-06 58.5 102 34.3
Duzib235G0850 Durio zibethinus HOM05D000003 ORTHO05D000167 2.5e-06 58.2 152 26.3
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 2.5e-06 58.2 134 32.1
COL.COLO4_06385 Corchorus olitorius HOM05D000395 ORTHO05D009449 3.3e-06 57.8 80 37.5
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 3.3e-06 57.8 73 39.7
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.3e-06 57.8 168 30.4
RhsimUnG0075100 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.3e-06 57.8 101 34.7
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.3e-06 57.4 93 32.3
TAR055G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000006 4.3e-06 57.4 56 46.4
COL.COLO4_32288 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.7e-06 57.0 110 31.8
SHI53806 Sapria himalayana HOM05D004990 ORTHO05D000022 5.7e-06 57.0 148 31.1
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 5.7e-06 57.0 70 37.1
COL.COLO4_27602 Corchorus olitorius HOM05D013144 ORTHO05D009449 7.4e-06 56.6 101 32.7
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 7.4e-06 56.6 52 42.3
QL11p035991 Quercus lobata HOM05D000003 ORTHO05D000006 7.4e-06 56.6 55 32.7
EL10Ac8g19860 Beta vulgaris HOM05D000003 ORTHO05D000006 9.7e-06 56.2 46 41.3
CANSAT54G1690 Cannabis sativa HOM05D000003 ORTHO05D000004 9.7e-06 56.2 139 31.7
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 9.7e-06 56.2 119 30.3
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 9.7e-06 56.2 118 34.7
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.7e-06 56.2 122 33.6
TAR626G1958 Trochodendron aralioides HOM05D000007 ORTHO05D035049 9.7e-06 56.2 70 42.9


User provided reference genes

Program Settings