Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 6.0e-129 464.2 229 100.0
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 1.8e-112 409.5 232 87.9
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 5.9e-92 341.3 233 76.8
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 7.2e-90 334.3 233 75.1
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 4.6e-89 331.6 233 75.5
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 1.8e-85 319.7 232 74.1
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 4.7e-81 305.1 231 70.6
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 3.0e-80 302.4 230 70.4
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 3.9e-80 302.0 233 70.0
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.1e-79 300.4 233 68.7
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 4.4e-79 298.5 237 68.4
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 7.4e-79 297.7 233 70.0
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 1.7e-78 296.6 233 70.0
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 8.2e-78 294.3 232 68.5
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 3.1e-77 292.4 232 68.1
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.1e-77 292.4 232 68.1
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 3.1e-77 292.4 234 67.9
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 9.1e-77 290.8 233 68.7
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.2e-76 290.4 235 67.7
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.2e-76 290.4 232 68.1
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 1.5e-76 290.0 234 67.5
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 4.5e-76 288.5 238 68.5
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 4.5e-76 288.5 238 68.1
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 7.7e-76 287.7 229 69.4
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 4.2e-74 282.0 233 68.7
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 8.0e-73 277.7 231 64.9
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 5.2e-72 275.0 231 68.0
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 1.5e-71 273.5 229 65.5
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 1.5e-71 273.5 227 64.3
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 2.0e-71 273.1 237 65.4
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 5.7e-71 271.6 227 63.4
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 7.4e-71 271.2 233 63.5
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.3e-70 270.4 229 63.8
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 3.7e-70 268.9 234 62.8
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 3.7e-70 268.9 227 63.4
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.8e-70 268.5 231 64.1
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 4.8e-70 268.5 234 62.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 8.2e-70 267.7 227 62.1
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.1e-69 267.3 234 62.8
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.1e-69 267.3 250 62.4
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.8e-69 266.5 234 62.4
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 4.1e-69 265.4 227 63.0
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 5.3e-69 265.0 231 61.5
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.2e-68 263.8 234 62.8
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.6e-68 263.5 235 61.7
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 5.9e-68 261.5 234 62.0
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 7.7e-68 261.2 228 62.7
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 1.7e-67 260.0 234 62.4
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.1e-66 257.3 228 64.5
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 1.9e-66 256.5 233 60.9
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.9e-66 256.5 167 77.8
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 3.2e-66 255.8 167 77.8
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.6e-65 253.4 167 77.2
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 2.7e-65 252.7 230 61.3
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 1.0e-64 250.8 220 62.7
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 1.4e-64 250.4 191 68.6
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.0e-63 246.5 161 78.3
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.0e-63 246.5 161 78.3
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 5.7e-63 245.0 233 61.4
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 5.7e-63 245.0 236 59.3
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 5.7e-63 245.0 234 59.0
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 9.7e-63 244.2 188 67.0
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 9.7e-63 244.2 229 60.3
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.3e-62 243.8 212 64.2
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.7e-62 243.4 163 74.8
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.8e-62 242.7 153 78.4
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 8.3e-62 241.1 206 66.0
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 1.1e-61 240.7 150 80.7
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.8e-61 240.0 180 71.7
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.8e-61 240.0 180 71.7
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.8e-61 240.0 180 71.7
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 2.4e-61 239.6 153 77.8
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 3.1e-61 239.2 175 72.0
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 4.1e-61 238.8 138 81.2
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 1.2e-60 237.3 156 77.6
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 2.7e-60 236.1 157 79.0
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 4.5e-60 235.3 188 67.0
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 5.9e-60 235.0 232 60.8
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 5.9e-60 235.0 232 60.8
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.7e-59 233.4 128 88.3
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 5.0e-59 231.9 156 75.6
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 6.5e-59 231.5 163 71.8
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 6.5e-59 231.5 163 71.8
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 3.6e-57 225.7 149 76.5
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 1.2e-55 220.7 126 83.3
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 8.3e-54 214.5 176 61.4
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.8e-53 213.4 224 57.1
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 4.1e-53 212.2 168 63.1
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.2e-52 210.7 171 62.6
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.0e-51 207.6 171 64.9
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 3.8e-51 205.7 172 65.7
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.9e-50 203.4 125 77.6
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 9.5e-50 201.1 143 72.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.1e-49 199.9 137 75.9
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 2.8e-46 189.5 146 62.3
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 9.2e-45 184.5 166 59.6
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 1.6e-44 183.7 229 49.8
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 9.5e-42 174.5 231 48.1
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 3.2e-37 159.5 155 57.4
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 5.6e-34 148.7 140 51.4
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 7.8e-28 128.3 181 47.0
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 5.2e-24 115.5 166 43.4
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 2.9e-22 109.8 84 70.2
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 9.2e-21 104.8 94 61.7
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 9.2e-21 104.8 61 80.3
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.1e-16 91.3 115 41.7
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.1e-16 91.3 67 68.7
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 2.3e-11 73.6 45 80.0
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 3.0e-11 73.2 195 26.7
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.9e-10 70.5 45 77.8
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 6.2e-09 65.5 101 33.7


User provided reference genes

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