Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16613 Corchorus olitorius HOM05D001471 ORTHO05D044728 5.1e-41 170.6 85 100.0
COL.COLO4_16611 Corchorus olitorius HOM05D001471 ORTHO05D001325 8.5e-12 73.6 87 51.7
Duzib251G0147 Durio zibethinus HOM05D001471 ORTHO05D001325 1.2e-10 69.7 46 73.9
COL.COLO4_16610 Corchorus olitorius HOM05D001471 ORTHO05D001325 1.6e-10 69.3 38 92.1
Duzib248G0789 Durio zibethinus HOM05D001471 ORTHO05D001325 2.1e-10 68.9 46 73.9
Thecc.02G294800 Theobroma cacao HOM05D001471 ORTHO05D001325 4.6e-10 67.8 46 73.9
PGSC0003DMG400022783 Solanum tuberosum HOM05D001471 ORTHO05D001325 8.8e-09 63.5 50 56.0
Gohir.D02G139600 Gossypium hirsutum HOM05D001471 ORTHO05D001325 2.5e-08 62.0 46 67.4
Gorai.005G157200 Gossypium raimondii HOM05D001471 ORTHO05D001325 2.5e-08 62.0 46 67.4
Sed0021426 Sechium edule HOM05D001471 ORTHO05D001325 3.3e-08 61.6 47 59.6
Gohir.A03G115738 Gossypium hirsutum HOM05D001471 ORTHO05D001325 5.7e-08 60.8 46 65.2
Gohir.A03G115776 Gossypium hirsutum HOM05D001471 ORTHO05D001325 5.7e-08 60.8 46 65.2
CsaV3_5G014400 Cucumis sativus L. HOM05D001471 ORTHO05D001325 2.2e-07 58.9 46 58.7
Prupe.1G334300 Prunus persica HOM05D001471 ORTHO05D001325 2.2e-07 58.9 38 68.4
ClCG07G005490 Citrullus lanatus HOM05D001471 ORTHO05D001325 2.8e-07 58.5 47 55.3
DCAR_002676 Daucus carota HOM05D001471 ORTHO05D001325 2.8e-07 58.5 46 56.5
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 3.7e-07 58.2 46 58.7
Medtr1g032580 Medicago truncatula HOM05D001471 ORTHO05D001325 4.8e-07 57.8 57 50.9
Lalb_Chr04g0258721 Lupinus albus HOM05D001471 ORTHO05D001325 6.3e-07 57.4 46 58.7
RcHm_v2.0_Chr4g0442771 Rosa chinensis HOM05D001471 ORTHO05D001325 6.3e-07 57.4 46 54.3
Migut.E00491 Erythranthe guttata HOM05D001471 ORTHO05D001325 8.2e-07 57.0 46 58.7
Psat6g051680 Pisum sativum HOM05D001471 ORTHO05D001325 8.2e-07 57.0 57 50.9
QL03p036155 Quercus lobata HOM05D001471 ORTHO05D001325 8.2e-07 57.0 46 58.7
TPR.G36972 Trifolium pratense HOM05D001471 ORTHO05D001325 8.2e-07 57.0 48 56.2
CANSAT78G1894 Cannabis sativa HOM05D001471 ORTHO05D001325 1.1e-06 56.6 46 54.3
MELO3C016667.2 Cucumis melo HOM05D001471 ORTHO05D001325 1.1e-06 56.6 46 52.2
Dinv18905 Davidia involucrata HOM05D001471 ORTHO05D001325 1.1e-06 56.6 46 54.3
CSS0008028 Camellia sinensis var. sinensis HOM05D001471 ORTHO05D001325 1.4e-06 56.2 46 54.3
Lj2g0009818 Lotus japonicus HOM05D001471 ORTHO05D001325 1.4e-06 56.2 46 58.7
Actinidia38432 Actinidia chinensis HOM05D001471 ORTHO05D001325 1.8e-06 55.8 46 56.5
MD13G1019700 Malus domestica HOM05D001471 ORTHO05D001325 1.8e-06 55.8 38 60.5
Phvul.003G016900 Phaseolus vulgaris HOM05D001471 ORTHO05D001325 1.8e-06 55.8 46 58.7
Actinidia34051 Actinidia chinensis HOM05D001471 ORTHO05D001325 2.4e-06 55.5 46 54.3
DCAR_023573 Daucus carota HOM05D001471 ORTHO05D044728 2.4e-06 55.5 39 53.8
Manes.15G135300 Manihot esculenta HOM05D001471 ORTHO05D001325 2.4e-06 55.5 46 54.3
SGA_v2.0_scaffold23G10183 Striga asiatica HOM05D001471 ORTHO05D001325 2.4e-06 55.5 39 64.1
TAR622G1183 Trochodendron aralioides HOM05D001471 ORTHO05D001325 2.4e-06 55.5 46 52.2
CANSAT78G0182 Cannabis sativa HOM05D001471 ORTHO05D001325 3.1e-06 55.1 46 56.5
ClCG07G005510 Citrullus lanatus HOM05D001471 ORTHO05D001325 3.1e-06 55.1 46 52.2
Manes.17G084700 Manihot esculenta HOM05D001471 ORTHO05D001325 3.1e-06 55.1 46 52.2
Nn3g18394 Nelumbo nucifera HOM05D001471 ORTHO05D001325 3.1e-06 55.1 46 54.3
SalBow2G2179 Salvia bowleyana HOM05D001471 ORTHO05D001325 3.1e-06 55.1 46 56.5
VMungo1215G2250 Vigna mungo HOM05D001471 ORTHO05D001325 3.1e-06 55.1 54 53.7
BcaC07g41538 Brassica carinata HOM05D001471 ORTHO05D001325 4.1e-06 54.7 107 36.4
Cfa015031 Carpinus fangiana HOM05D001471 ORTHO05D001325 4.1e-06 54.7 46 52.2
MELO3C016666.2 Cucumis melo HOM05D001471 ORTHO05D001325 4.1e-06 54.7 46 50.0
FAN07G0242 Fragaria x ananassa HOM05D001471 ORTHO05D001325 4.1e-06 54.7 38 63.2
FAN07G1372 Fragaria x ananassa HOM05D001471 ORTHO05D001325 4.1e-06 54.7 38 63.2
HanXRQChr17g0566411 Helianthus annuus HOM05D001471 ORTHO05D001325 4.1e-06 54.7 89 37.1
Atru.chr11.907 Acer truncatum HOM05D001471 ORTHO05D001325 5.3e-06 54.3 46 54.3
Aqoxy3G00149 Aquilegia oxysepala HOM05D001471 ORTHO05D001325 5.3e-06 54.3 88 38.6
Ca_12534_v3 Cicer arietinum L. HOM05D001471 ORTHO05D001325 5.3e-06 54.3 59 49.2
Eucgr.B02680 Eucalyptus grandis HOM05D001471 ORTHO05D001325 5.3e-06 54.3 88 37.5
Eucgr.L02625 Eucalyptus grandis HOM05D001471 ORTHO05D001325 5.3e-06 54.3 88 37.5
Manes.17G084777 Manihot esculenta HOM05D001471 ORTHO05D001325 5.3e-06 54.3 38 60.5
Cpa.g.sc2.185 Carica papaya HOM05D001471 ORTHO05D001325 6.9e-06 53.9 39 61.5
ECA234G0551 Erigeron canadensis HOM05D001103 ORTHO05D000954 6.9e-06 53.9 88 38.6
FvH4_4g33460 Fragaria vesca HOM05D001471 ORTHO05D001325 6.9e-06 53.9 38 60.5
FAN12G3380 Fragaria x ananassa HOM05D001471 ORTHO05D001325 6.9e-06 53.9 38 60.5
FAN17G0340 Fragaria x ananassa HOM05D001471 ORTHO05D001325 6.9e-06 53.9 38 60.5
FAN22G0021 Fragaria x ananassa HOM05D001471 ORTHO05D001325 6.9e-06 53.9 38 60.5
Lsat_1_v5_gn_4_24681 Lactuca sativa HOM05D001471 ORTHO05D001325 6.9e-06 53.9 46 54.3
arahy.Tifrunner.gnm1.ann1.D9VVXL Arachis hypogaea HOM05D001471 ORTHO05D001325 9.1e-06 53.5 46 52.2
arahy.Tifrunner.gnm1.ann1.LXT1CN Arachis hypogaea HOM05D001471 ORTHO05D001325 9.1e-06 53.5 46 52.2
Ciclev10016393m.g Citrus clementina HOM05D001471 ORTHO05D001325 9.1e-06 53.5 38 60.5
Haze_10866 Corylus avellana HOM05D001471 ORTHO05D001325 9.1e-06 53.5 46 52.2
Migut.E00490 Erythranthe guttata HOM05D001471 ORTHO05D001325 9.1e-06 53.5 46 54.3
THA.LOC104805086 Tarenaya hassleriana HOM05D001471 ORTHO05D001325 9.1e-06 53.5 88 39.8


User provided reference genes

Program Settings