Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 3.2e-119 431.8 219 100.0
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 4.4e-105 384.8 213 88.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 6.0e-102 374.4 213 87.3
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.0e-101 373.6 213 86.9
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 5.1e-101 371.3 213 85.9
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.5e-100 369.8 213 86.9
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 5.1e-93 344.7 213 78.9
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 1.5e-92 343.2 210 77.6
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 7.3e-92 340.9 213 76.5
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 9.6e-92 340.5 213 77.0
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.4e-90 336.7 213 77.0
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 3.1e-90 335.5 230 72.2
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 4.0e-90 335.1 210 78.1
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.2e-89 333.6 213 76.5
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.2e-89 333.6 213 75.1
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.5e-89 333.2 213 76.5
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 7.6e-89 330.9 213 75.6
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 9.9e-89 330.5 213 74.6
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 1.3e-88 330.1 213 75.1
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.7e-88 329.7 213 76.1
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 3.8e-88 328.6 213 74.2
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 3.8e-88 328.6 213 75.6
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 3.8e-88 328.6 208 77.4
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 6.4e-88 327.8 200 78.5
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.4e-87 326.6 206 76.2
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 1.9e-87 326.2 214 72.9
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 3.2e-87 325.5 213 73.7
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 4.2e-87 325.1 213 74.2
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 5.4e-87 324.7 213 72.8
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 5.4e-87 324.7 213 74.6
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.2e-86 323.6 213 73.7
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 1.2e-86 323.6 211 73.5
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 1.6e-86 323.2 213 73.2
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 2.1e-86 322.8 214 72.9
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 3.5e-86 322.0 217 72.8
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 4.6e-86 321.6 214 73.4
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 6.0e-86 321.2 213 70.4
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 7.8e-86 320.9 214 74.8
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 7.8e-86 320.9 213 72.3
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.0e-85 320.5 217 72.8
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 1.0e-85 320.5 215 72.1
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.3e-85 320.1 217 72.8
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.3e-85 320.1 209 75.1
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.3e-85 320.1 213 72.8
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 3.0e-85 318.9 212 71.7
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 1.1e-84 317.0 210 73.3
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 1.5e-84 316.6 217 73.3
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.9e-84 316.2 215 70.7
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 2.5e-84 315.8 204 75.5
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 4.3e-84 315.1 213 69.0
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 5.6e-84 314.7 213 71.4
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 9.6e-84 313.9 217 72.4
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 1.6e-83 313.2 217 71.9
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 2.8e-83 312.4 210 73.3
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 6.2e-83 311.2 213 70.0
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.1e-82 310.5 211 73.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 1.8e-82 309.7 217 70.5
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 2.0e-81 306.2 213 69.5
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 3.4e-81 305.4 208 71.6
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 4.5e-81 305.1 214 72.0
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 5.8e-81 304.7 214 72.0
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 9.9e-81 303.9 213 70.0
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 1.7e-80 303.1 213 68.5
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 6.4e-80 301.2 214 69.6
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 6.4e-80 301.2 214 68.7
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 8.4e-80 300.8 214 69.2
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.4e-79 300.1 210 69.0
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.4e-79 300.1 210 69.0
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 2.4e-79 299.3 211 71.6
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 3.2e-79 298.9 214 69.2
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 7.1e-79 297.7 210 69.0
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 4.6e-78 295.0 217 67.3
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 7.9e-78 294.3 214 67.8
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 1.7e-77 293.1 202 69.8
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 3.0e-77 292.4 214 72.0
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 5.1e-77 291.6 211 68.2
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 6.6e-77 291.2 214 66.8
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 6.6e-77 291.2 214 66.8
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.1e-76 290.4 214 67.3
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.5e-76 290.0 212 69.3
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 1.5e-76 290.0 214 66.4
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 1.5e-76 290.0 214 66.4
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 3.6e-75 285.4 212 68.4
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 3.6e-75 285.4 214 65.4
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 8.1e-75 284.3 209 67.5
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 4.5e-73 278.5 202 67.8
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 7.6e-73 277.7 201 69.2
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 2.9e-72 275.8 211 64.9
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 3.8e-72 275.4 203 67.5
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 3.8e-72 275.4 198 65.2
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.2e-70 270.4 193 66.3
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 6.0e-70 268.1 211 63.0
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.5e-65 251.9 213 58.7
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 1.7e-64 250.0 236 55.9
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 2.7e-62 242.7 151 78.1
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 4.6e-62 241.9 195 66.7
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.2e-56 223.0 135 80.0
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 2.3e-53 213.0 208 53.4
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 2.7e-46 189.5 135 67.4
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 5.1e-45 185.3 194 46.4
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.5e-41 173.7 131 65.6
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.9e-40 169.5 214 49.1
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.1e-39 167.5 208 43.8
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 4.2e-39 165.6 116 66.4
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 4.7e-38 162.2 202 40.6
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 4.7e-38 162.2 118 66.9
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 1.3e-35 154.1 202 40.1
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 8.2e-35 151.4 201 40.8
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 3.8e-32 142.5 202 37.6
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.1e-31 141.0 91 75.8
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 5.5e-31 138.7 109 67.9
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 1.3e-27 127.5 145 49.0
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.1e-22 110.2 72 66.7
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 4.1e-18 95.9 208 32.2
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 7.2e-15 85.1 88 56.8
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 7.2e-15 85.1 88 56.8
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 2.0e-09 67.0 43 67.4


User provided reference genes

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