Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 5.4e-234 813.9 404 100.0
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 7.0e-181 637.5 408 80.6
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.6e-169 598.6 410 75.9
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.0e-168 597.0 405 77.3
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.0e-168 595.5 407 75.7
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.9e-162 576.2 411 73.7
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 3.6e-145 518.8 401 66.8
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.5e-143 513.5 371 68.7
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 9.9e-143 510.8 403 65.8
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.3e-142 510.4 388 67.5
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.7e-142 510.0 410 65.6
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.9e-142 509.2 363 69.7
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.1e-141 507.3 414 65.2
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 5.4e-141 505.0 397 65.7
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 4.3e-138 495.4 402 62.9
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.1e-137 493.0 402 64.9
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 4.7e-137 491.9 402 64.4
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.8e-136 490.0 387 65.6
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 5.8e-135 485.0 370 66.2
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.7e-134 483.4 402 62.9
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.2e-134 483.0 411 60.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 3.8e-134 482.3 395 62.0
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 4.9e-134 481.9 395 62.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 8.4e-134 481.1 387 64.6
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.9e-133 479.9 377 62.9
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.1e-132 476.5 343 69.4
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.7e-132 476.1 409 62.3
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 3.5e-132 475.7 362 67.1
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 4.6e-132 475.3 383 65.5
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.0e-131 474.2 397 61.7
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.3e-131 473.8 397 61.2
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 6.6e-131 471.5 338 72.2
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 8.6e-131 471.1 364 65.4
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.5e-130 470.3 400 62.8
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.9e-130 469.9 394 59.9
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 4.3e-130 468.8 388 64.4
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 9.6e-130 467.6 383 64.2
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.8e-129 466.1 383 63.2
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 3.6e-129 465.7 356 64.9
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.5e-127 460.3 368 64.1
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.5e-127 460.3 364 63.5
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.0e-127 459.9 413 59.6
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 5.8e-127 458.4 368 61.7
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.3e-126 457.2 396 62.1
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 6.0e-124 448.4 362 63.0
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.1e-122 444.1 403 59.8
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.5e-122 443.7 392 58.4
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 4.3e-122 442.2 373 61.1
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 8.1e-121 438.0 375 61.6
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.8e-120 436.8 354 64.4
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.8e-120 436.8 371 60.4
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 2.4e-120 436.4 385 59.2
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.1e-120 436.0 354 64.7
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.2e-119 434.1 379 61.2
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.0e-119 433.3 371 60.1
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.6e-119 433.0 385 59.0
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 7.6e-119 431.4 453 52.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 9.9e-119 431.0 380 60.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.3e-118 430.6 382 59.7
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.7e-118 430.3 371 61.5
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 2.9e-118 429.5 403 55.3
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.9e-118 429.5 377 61.0
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 6.4e-118 428.3 381 60.9
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 2.4e-117 426.4 376 61.7
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.4e-117 425.2 371 58.5
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 5.4e-117 425.2 385 59.5
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.2e-116 424.1 385 58.4
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.6e-116 423.7 303 69.3
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 3.5e-116 422.5 353 61.8
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.5e-116 422.5 352 62.2
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 4.6e-116 422.2 380 59.5
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 7.9e-116 421.4 374 61.2
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.0e-115 421.0 384 57.6
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 5.1e-115 418.7 386 58.3
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 8.7e-115 417.9 389 58.4
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.1e-114 417.5 353 61.2
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 4.3e-114 415.6 353 60.9
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 5.6e-114 415.2 339 61.7
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 9.6e-114 414.5 353 60.6
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.8e-113 412.9 365 57.3
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.8e-112 410.2 349 61.0
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.2e-110 403.3 361 56.8
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 2.9e-110 402.9 366 56.8
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.4e-109 400.6 361 56.2
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 2.4e-109 399.8 300 66.3
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 6.0e-108 395.2 393 53.7
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 9.6e-106 387.9 395 53.2
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.6e-105 387.1 287 66.6
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.8e-105 386.3 397 54.4
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 2.0e-103 380.2 291 64.6
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 4.9e-102 375.6 244 74.2
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.6e-100 370.5 275 68.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.2e-94 350.1 280 62.1
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 4.2e-93 345.9 404 47.8
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.2e-92 344.4 250 69.2
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.1e-90 337.8 249 68.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.5e-90 336.7 315 57.8
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.3e-88 328.9 249 67.5
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 6.9e-88 328.6 338 51.8
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.5e-87 327.4 376 48.4
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 4.7e-84 315.8 342 47.7
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.1e-84 315.5 186 79.0
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.6e-82 310.1 341 51.3
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.2e-79 301.2 308 49.7
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 4.2e-77 292.7 178 76.4
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 3.6e-76 289.7 304 51.6
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 4.1e-56 223.0 233 51.9
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 2.0e-55 220.7 203 62.1
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-49 201.4 176 57.4
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 4.0e-43 179.9 243 41.6
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 7.0e-40 169.1 148 60.1
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.7e-39 167.2 272 38.2
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.0e-38 165.2 204 41.2
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.5e-34 151.4 182 47.8
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 9.2e-32 142.1 108 68.5
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 2.0e-26 124.4 74 79.7
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 7.3e-13 79.3 55 67.3
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 7.6e-10 69.3 48 58.3


User provided reference genes

Program Settings