Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_15810 Corchorus olitorius HOM05D001083 ORTHO05D162214 2.2e-114 415.6 209 100.0
COL.COLO4_19707 Corchorus olitorius HOM05D001083 ORTHO05D001637 2.0e-14 83.6 49 87.8
Gohir.A07G194400 Gossypium hirsutum HOM05D001083 ORTHO05D001637 1.1e-12 77.8 49 77.6
Gohir.D07G200700 Gossypium hirsutum HOM05D001083 ORTHO05D001637 1.1e-12 77.8 49 77.6
Gorai.001G225300 Gossypium raimondii HOM05D001083 ORTHO05D001637 1.1e-12 77.8 49 77.6
Duzib138G0365 Durio zibethinus HOM05D001083 ORTHO05D001637 1.4e-12 77.4 49 79.6
Thecc.01G202300 Theobroma cacao HOM05D001083 ORTHO05D001637 2.1e-11 73.6 49 73.5
Atru.chr6.3458 Acer truncatum HOM05D001083 ORTHO05D001637 6.7e-10 68.6 50 74.0
Cpa.g.sc4189.1 Carica papaya HOM05D001083 ORTHO05D018699 7.4e-09 65.1 50 66.0
Cfa014188 Carpinus fangiana HOM05D001083 ORTHO05D001637 9.7e-09 64.7 50 66.0
Haze_12565 Corylus avellana HOM05D001083 ORTHO05D001637 1.3e-08 64.3 50 66.0
CiPaw.03G284800 Carya illinoinensis HOM05D001083 ORTHO05D001637 3.7e-08 62.8 50 60.0
TWI36G0616 Tripterygium wilfordii HOM05D001083 ORTHO05D001637 8.2e-08 61.6 50 64.0
Potri.014G172000 Populus trichocarpa HOM05D001083 ORTHO05D001637 2.4e-07 60.1 50 64.0
TAR629G2855 Trochodendron aralioides HOM05D001083 ORTHO05D001637 2.4e-07 60.1 50 64.0
Ca_06486_v3 Cicer arietinum L. HOM05D001083 ORTHO05D001637 3.1e-07 59.7 49 57.1
Medtr5g098710 Medicago truncatula HOM05D001083 ORTHO05D001637 4.1e-07 59.3 49 59.2
QL04p065705 Quercus lobata HOM05D001083 ORTHO05D001637 4.1e-07 59.3 50 60.0
TPR.G35889 Trifolium pratense HOM05D001083 ORTHO05D001637 4.1e-07 59.3 49 59.2
THA.LOC104822527 Tarenaya hassleriana HOM05D001083 ORTHO05D001637 5.3e-07 58.9 50 66.0
TWI36G0348 Tripterygium wilfordii HOM05D001083 ORTHO05D001637 5.3e-07 58.9 50 62.0
Dinv21335 Davidia involucrata HOM05D001083 ORTHO05D001637 6.9e-07 58.5 50 64.0
CSS0020165 Camellia sinensis var. sinensis HOM05D001083 ORTHO05D001637 9.0e-07 58.2 50 64.0
CSS0030266 Camellia sinensis var. sinensis HOM05D001083 ORTHO05D001637 9.0e-07 58.2 50 64.0
Lj8A139G63 Lonicera japonica HOM05D001083 ORTHO05D001637 1.2e-06 57.8 50 58.0
Sabra14G0131500 Salix brachista HOM05D001083 ORTHO05D001637 1.5e-06 57.4 50 62.0
Manes.12G058400 Manihot esculenta HOM05D001083 ORTHO05D001637 2.0e-06 57.0 50 62.0
Oeu030576.1 Olea europaea HOM05D001083 ORTHO05D001637 2.0e-06 57.0 49 57.1
Cc05_g09900 Coffea canephora HOM05D001083 ORTHO05D001637 3.4e-06 56.2 50 62.0
Eucgr.K01368 Eucalyptus grandis HOM05D001083 ORTHO05D001637 3.4e-06 56.2 49 55.1
FvH4_6g40180 Fragaria vesca HOM05D001083 ORTHO05D001637 3.4e-06 56.2 50 58.0
FAN02G2977 Fragaria x ananassa HOM05D001083 ORTHO05D001637 3.4e-06 56.2 50 58.0
FAN14G2444 Fragaria x ananassa HOM05D001083 ORTHO05D001637 3.4e-06 56.2 50 58.0
Phvul.008G289400 Phaseolus vulgaris HOM05D001083 ORTHO05D001637 3.4e-06 56.2 50 60.0
Glyma.14G003600 Glycine max HOM05D001083 ORTHO05D001637 4.5e-06 55.8 50 58.0
SalBow8G2763 Salvia bowleyana HOM05D001083 ORTHO05D001637 5.9e-06 55.5 49 55.1
PGR044G2732 Punica granatum HOM05D001083 ORTHO05D001637 7.7e-06 55.1 49 59.2
Actinidia20613 Actinidia chinensis HOM05D001083 ORTHO05D001637 1.0e-05 54.7 50 62.0
Glyma.02G309200 Glycine max HOM05D001083 ORTHO05D001637 1.0e-05 54.7 50 58.0
Psat2g002000 Pisum sativum HOM05D001083 ORTHO05D001637 1.0e-05 54.7 49 55.1
Prupe.3G192200 Prunus persica HOM05D001083 ORTHO05D001637 1.0e-05 54.7 50 58.0


User provided reference genes

Program Settings