Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_15625 Corchorus olitorius HOM05D002516 ORTHO05D002703 1.9e-170 602.4 307 100.0
Duzib133G1084 Durio zibethinus HOM05D002516 ORTHO05D002703 4.0e-27 126.3 195 48.2
Thecc.01G221100 Theobroma cacao HOM05D002516 ORTHO05D002703 4.0e-27 126.3 195 48.2
Gorai.007G156200 Gossypium raimondii HOM05D002516 ORTHO05D002703 1.3e-25 121.3 200 47.0
Duzib138G0225 Durio zibethinus HOM05D002516 ORTHO05D002703 3.7e-25 119.8 192 46.9
Gohir.D11G145700 Gossypium hirsutum HOM05D002516 ORTHO05D002703 3.7e-25 119.8 203 45.8
Gohir.A07G158100 Gossypium hirsutum HOM05D002516 ORTHO05D002703 6.3e-25 119.0 186 48.9
Gohir.A11G139500 Gossypium hirsutum HOM05D002516 ORTHO05D002703 1.1e-24 118.2 197 46.7
Duzib211G0537 Durio zibethinus HOM05D002516 ORTHO05D002703 7.0e-24 115.5 192 45.8
Gorai.001G188100 Gossypium raimondii HOM05D002516 ORTHO05D002703 9.2e-24 115.2 186 47.8
Gohir.D07G205800 Gossypium hirsutum HOM05D002516 ORTHO05D002703 1.4e-16 91.3 205 38.5
Gorai.001G231800 Gossypium raimondii HOM05D002516 ORTHO05D002703 5.4e-16 89.4 205 38.0
Gohir.A07G199400 Gossypium hirsutum HOM05D002516 ORTHO05D002703 4.6e-15 86.3 205 37.6
Gohir.D07G164200 Gossypium hirsutum HOM05D002516 ORTHO05D002703 6.6e-14 82.4 187 39.6
Manes.12G046900 Manihot esculenta HOM05D002516 ORTHO05D002703 1.9e-13 80.9 186 37.1
Manes.13G049000 Manihot esculenta HOM05D002516 ORTHO05D002703 2.1e-12 77.4 191 36.6
CSS0033368 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 4.0e-11 73.2 211 34.6
Haze_15034 Corylus avellana HOM05D002516 ORTHO05D002703 3.4e-10 70.1 211 36.5
TWI75G1449 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 4.4e-10 69.7 189 30.2
Eucgr.K02140 Eucalyptus grandis HOM05D002516 ORTHO05D002703 5.8e-10 69.3 187 36.9
Atru.chr2.3423 Acer truncatum HOM05D002516 ORTHO05D002703 9.8e-10 68.6 89 51.7
TWI36G0113 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 1.7e-09 67.8 187 35.3
Atru.chr6.1421 Acer truncatum HOM05D002516 ORTHO05D002703 2.2e-09 67.4 89 50.6
Ca_03039_v3 Cicer arietinum L. HOM05D002516 ORTHO05D002703 3.7e-09 66.6 197 34.0
Potri.014G191400 Populus trichocarpa HOM05D002516 ORTHO05D002703 6.4e-09 65.9 192 33.9
TPR.G21567 Trifolium pratense HOM05D002516 ORTHO05D002703 6.4e-09 65.9 201 32.8
TWI18G0693 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 1.1e-08 65.1 181 34.8
Cpa.g.sc8.125 Carica papaya HOM05D002516 ORTHO05D002703 2.4e-08 63.9 194 33.5
QL09p051749 Quercus lobata HOM05D002516 ORTHO05D002703 4.1e-08 63.2 95 48.4
QL09p052462 Quercus lobata HOM05D002516 ORTHO05D002703 4.1e-08 63.2 95 48.4
Cfa004378 Carpinus fangiana HOM05D002516 ORTHO05D002703 5.4e-08 62.8 92 52.2
Glyma.12G028700 Glycine max HOM05D002516 ORTHO05D002703 7.0e-08 62.4 194 32.5
Potri.002G245500 Populus trichocarpa HOM05D002516 ORTHO05D002703 7.0e-08 62.4 195 32.8
PGR044G0119 Punica granatum HOM05D002516 ORTHO05D002703 9.2e-08 62.0 196 36.2
CANSAT01G0325 Cannabis sativa HOM05D002516 ORTHO05D002703 1.2e-07 61.6 184 33.2
CANSAT01G2920 Cannabis sativa HOM05D002516 ORTHO05D002703 1.2e-07 61.6 184 33.2
CiPaw.01G049600 Carya illinoinensis HOM05D002516 ORTHO05D002703 1.6e-07 61.2 201 31.3
Rhsim01G0254000 Rhododendron simsii HOM05D002516 ORTHO05D002703 3.5e-07 60.1 203 33.0
Ciclev10022263m.g Citrus clementina HOM05D002516 ORTHO05D002703 4.6e-07 59.7 185 34.6
VMungo1127G1407 Vigna mungo HOM05D002516 ORTHO05D002703 4.6e-07 59.7 199 32.2
TAR365G0852 Trochodendron aralioides HOM05D002516 ORTHO05D002703 6.0e-07 59.3 187 33.2
RcHm_v2.0_Chr6g0284181 Rosa chinensis HOM05D002516 ORTHO05D002703 1.3e-06 58.2 196 32.7
Sed0020045 Sechium edule HOM05D002516 ORTHO05D002703 1.7e-06 57.8 205 33.7
Actinidia39434 Actinidia chinensis HOM05D002516 ORTHO05D002703 2.3e-06 57.4 193 32.1
DCAR_012667 Daucus carota HOM05D002516 ORTHO05D002703 2.3e-06 57.4 203 33.0
Nn1g07949 Nelumbo nucifera HOM05D002516 ORTHO05D002703 3.0e-06 57.0 204 32.4
Phvul.011G032000 Phaseolus vulgaris HOM05D002516 ORTHO05D002703 3.0e-06 57.0 199 30.7
arahy.Tifrunner.gnm1.ann1.7060PQ Arachis hypogaea HOM05D002516 ORTHO05D002703 5.0e-06 56.2 209 32.5
arahy.Tifrunner.gnm1.ann1.WSZ24T Arachis hypogaea HOM05D002516 ORTHO05D002703 5.0e-06 56.2 209 32.5
Lalb_Chr03g0024911 Lupinus albus HOM05D002516 ORTHO05D002703 5.0e-06 56.2 215 29.8
Lj3g0007155 Lotus japonicus HOM05D002516 ORTHO05D002703 6.6e-06 55.8 210 30.5
Rhsim13G0047300 Rhododendron simsii HOM05D002516 ORTHO05D002703 6.6e-06 55.8 187 35.3
THA.LOC104818971 Tarenaya hassleriana HOM05D002516 ORTHO05D002703 6.6e-06 55.8 184 30.4
Glyma.11G103800 Glycine max HOM05D002516 ORTHO05D002703 8.6e-06 55.5 187 33.7


User provided reference genes

Program Settings