Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 8.8e-88 327.0 176 100.0
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 1.3e-78 296.6 176 89.8
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.3e-75 286.6 176 85.8
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 8.5e-75 283.9 176 84.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 8.5e-75 283.9 176 84.1
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.9e-74 282.7 177 84.2
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 3.2e-74 282.0 177 83.6
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.2e-74 281.6 176 83.5
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 4.2e-74 281.6 176 83.5
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.2e-74 280.8 176 84.1
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 9.4e-74 280.4 177 83.6
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 2.1e-73 279.3 175 82.9
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.6e-73 278.5 176 83.0
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 3.6e-73 278.5 177 80.8
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 4.7e-73 278.1 176 83.5
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 6.1e-73 277.7 176 84.1
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.0e-72 276.9 177 84.2
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 1.4e-72 276.6 176 84.7
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.4e-72 276.6 176 83.5
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.3e-72 275.8 176 84.1
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 6.8e-72 274.2 178 82.6
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 8.8e-72 273.9 177 82.5
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 8.8e-72 273.9 154 90.9
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.2e-71 273.5 177 82.5
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-71 273.1 176 79.0
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-71 273.1 176 79.5
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.5e-71 273.1 176 79.5
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.5e-71 273.1 176 79.0
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 2.0e-71 272.7 177 79.1
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 4.4e-71 271.6 176 79.5
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 9.8e-71 270.4 176 77.8
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.7e-70 269.6 161 85.7
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 2.2e-70 269.2 176 77.3
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 2.8e-70 268.9 176 80.1
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 4.8e-70 268.1 176 76.7
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 6.3e-70 267.7 178 78.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.1e-69 266.9 176 76.7
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.1e-69 266.9 167 83.2
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.1e-69 266.9 176 80.1
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.4e-69 266.5 174 80.5
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 2.4e-69 265.8 174 79.9
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.4e-69 265.8 174 79.9
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 3.1e-69 265.4 176 79.0
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.1e-69 265.4 177 78.5
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 9.1e-69 263.8 163 82.8
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 9.1e-69 263.8 173 78.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 9.1e-69 263.8 173 78.0
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.2e-68 263.5 170 80.0
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.2e-68 263.5 177 78.5
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.6e-68 263.1 176 80.1
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 2.0e-68 262.7 179 77.7
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 2.7e-68 262.3 158 84.8
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.7e-68 262.3 177 79.1
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 5.9e-68 261.2 168 81.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 5.9e-68 261.2 157 86.6
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 5.9e-68 261.2 167 80.2
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 7.7e-68 260.8 176 78.4
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.0e-67 260.4 181 75.7
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.0e-67 260.4 181 75.7
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.0e-67 260.4 181 75.7
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.7e-67 259.6 177 79.7
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 2.3e-67 259.2 179 78.2
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 2.3e-67 259.2 179 78.2
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 2.9e-67 258.8 169 79.9
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 5.0e-67 258.1 170 77.6
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 5.0e-67 258.1 176 78.4
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.5e-67 257.7 178 77.5
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.6e-67 257.3 178 77.5
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.6e-67 257.3 174 78.7
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 8.6e-67 257.3 176 77.3
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.1e-66 256.9 179 77.7
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.1e-66 256.9 167 79.0
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.5e-66 256.5 178 75.3
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 3.2e-66 255.4 175 77.7
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 3.2e-66 255.4 180 75.6
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 4.2e-66 255.0 178 75.3
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 4.2e-66 255.0 176 76.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 5.5e-66 254.6 176 75.0
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 9.5e-66 253.8 178 75.8
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 9.5e-66 253.8 179 74.9
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.2e-65 253.4 170 78.2
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.2e-65 253.4 151 84.8
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.6e-65 253.1 179 74.3
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.8e-65 252.3 174 75.3
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 3.6e-65 251.9 174 76.4
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.7e-65 251.5 153 81.7
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 4.7e-65 251.5 142 89.4
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.1e-65 251.1 153 81.7
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 8.0e-65 250.8 176 74.4
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 8.0e-65 250.8 151 82.8
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.3e-64 249.2 179 73.2
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.0e-64 248.8 153 83.7
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 3.0e-64 248.8 158 81.6
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.0e-64 248.4 147 85.7
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.2e-63 246.9 176 72.2
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 5.7e-63 244.6 153 79.7
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.9e-62 241.5 164 78.7
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 3.1e-61 238.8 162 75.9
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.1e-61 238.8 173 69.9
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 2.0e-60 236.1 178 69.1
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.3e-59 232.6 176 68.2
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.5e-58 229.9 152 76.3
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 2.5e-58 229.2 175 66.9
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 4.3e-58 228.4 175 68.6
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.8e-57 225.7 156 77.6
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.1e-57 224.6 137 80.3
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 2.3e-56 222.6 157 74.5
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.7e-54 216.5 150 75.3
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 4.9e-54 214.9 152 73.0
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 5.9e-52 208.0 118 91.5
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 8.6e-51 204.1 131 79.4
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 1.1e-50 203.8 154 68.8
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 4.3e-50 201.8 153 64.7
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 4.3e-50 201.8 120 85.8
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.3e-50 201.8 118 89.0
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 3.6e-49 198.7 161 64.6
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 5.8e-47 191.4 108 90.7
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.1e-45 185.3 107 86.9
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 2.0e-44 183.0 121 76.0
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 6.0e-44 181.4 152 60.5
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 1.7e-43 179.9 131 64.9
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 5.0e-43 178.3 107 84.1
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.5e-42 176.8 129 73.6
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 3.3e-34 149.1 91 81.3
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 2.4e-29 132.9 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.6e-17 93.6 106 54.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 5.6e-10 68.6 118 44.1


User provided reference genes

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