Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 3.5e-39 164.5 81 100.0
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 5.6e-29 130.6 81 79.0
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 1.0e-27 126.3 81 76.5
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 2.0e-26 122.1 74 78.4
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 2.0e-26 122.1 74 78.4
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 1.3e-25 119.4 74 77.0
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 1.9e-21 105.5 53 96.2
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 1.9e-21 105.5 74 71.6
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 2.5e-21 105.1 70 68.6
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 2.1e-20 102.1 81 67.9
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 2.1e-20 102.1 70 68.6
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 3.6e-20 101.3 74 68.9
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 3.6e-20 101.3 74 68.9
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 6.2e-20 100.5 89 61.8
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 6.2e-20 100.5 75 66.7
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 8.0e-20 100.1 78 67.9
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 8.0e-20 100.1 66 68.2
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 1.4e-19 99.4 66 68.2
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 1.8e-19 99.0 74 67.6
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 1.8e-19 99.0 74 67.6
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 1.8e-19 99.0 56 80.4
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 4.0e-19 97.8 66 69.7
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 4.0e-19 97.8 85 61.2
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 5.2e-19 97.4 61 73.8
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 8.9e-19 96.7 81 61.7
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 1.5e-18 95.9 79 60.8
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 2.6e-18 95.1 61 73.8
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 4.4e-18 94.4 60 71.7
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 4.4e-18 94.4 74 64.9
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 5.8e-18 94.0 74 64.9
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 5.8e-18 94.0 72 63.9
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 9.8e-18 93.2 62 67.7
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 9.8e-18 93.2 74 63.5
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 1.3e-17 92.8 78 61.5
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 1.3e-17 92.8 61 67.2
COL.COLO4_25738 Corchorus olitorius HOM05D007586 ORTHO05D009554 1.7e-17 92.4 47 95.7
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 1.7e-17 92.4 67 65.7
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 1.7e-17 92.4 75 62.7
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 2.9e-17 91.7 78 60.3
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 2.9e-17 91.7 75 62.7
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 2.9e-17 91.7 74 60.8
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 3.7e-17 91.3 76 63.2
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 6.4e-17 90.5 62 66.1
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 6.4e-17 90.5 72 61.1
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 6.4e-17 90.5 71 59.2
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 8.3e-17 90.1 68 66.2
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 2.4e-16 88.6 53 73.6
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 3.2e-16 88.2 67 67.2
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 3.2e-16 88.2 77 62.3
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 4.1e-16 87.8 76 57.9
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 7.0e-16 87.0 60 68.3
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 9.2e-16 86.7 59 67.8
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 1.6e-15 85.9 65 66.2
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 2.0e-15 85.5 59 59.3
COL.COLO4_25736 Corchorus olitorius HOM05D007586 ORTHO05D009554 4.6e-15 84.3 47 87.2
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 4.6e-15 84.3 52 76.9
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 6.0e-15 84.0 74 55.4
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 7.8e-15 83.6 73 63.0
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 1.0e-14 83.2 68 55.9
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 1.3e-14 82.8 73 52.1
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 3.0e-14 81.6 67 55.2
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 3.0e-14 81.6 46 78.3
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 3.9e-14 81.3 62 64.5
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 8.6e-14 80.1 73 57.5
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 8.6e-14 80.1 73 57.5
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 1.1e-13 79.7 44 79.5
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 1.5e-13 79.3 91 50.5
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 1.5e-13 79.3 77 53.2
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 1.9e-13 79.0 74 56.8
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 4.3e-13 77.8 81 49.4
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 4.3e-13 77.8 52 67.3
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 5.6e-13 77.4 81 48.1
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 5.6e-13 77.4 68 54.4
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 1.2e-12 76.3 74 54.1
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 1.2e-12 76.3 75 49.3
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 1.6e-12 75.9 81 55.6
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 2.8e-12 75.1 74 54.1
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 2.8e-12 75.1 57 59.6
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 3.6e-12 74.7 65 55.4
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 3.6e-12 74.7 54 55.6
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 4.7e-12 74.3 73 49.3
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 8.1e-12 73.6 56 62.5
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 8.1e-12 73.6 79 46.8
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 1.4e-11 72.8 54 64.8
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 8.9e-11 70.1 57 54.4
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 2.6e-10 68.6 51 58.8
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 3.4e-10 68.2 52 59.6
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 4.4e-10 67.8 62 53.2
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 1.3e-09 66.2 62 58.1
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 1.7e-09 65.9 82 43.9
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.1e-08 63.2 73 50.7
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 2.4e-08 62.0 32 81.2
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 5.4e-08 60.8 65 41.5
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 7.1e-08 60.5 37 62.2
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 1.6e-07 59.3 43 65.1
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 2.7e-07 58.5 46 52.2


User provided reference genes

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