Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 7.6e-50 201.8 97 100.0
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 5.1e-38 162.5 93 79.6
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 4.0e-35 152.9 89 77.5
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.1e-32 144.8 98 70.4
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 1.4e-32 144.4 93 65.6
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 4.2e-32 142.9 97 62.9
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 9.3e-32 141.7 97 69.1
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 1.3e-30 137.9 96 64.6
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 5.1e-30 136.0 92 62.0
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 2.1e-28 130.6 87 60.9
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 2.8e-28 130.2 92 64.1
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 1.1e-27 128.3 87 58.6
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 3.1e-27 126.7 93 62.4
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 3.1e-27 126.7 91 59.3
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 4.0e-27 126.3 94 57.4
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 6.9e-27 125.6 96 61.5
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.6e-26 123.6 94 56.4
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 2.6e-26 123.6 96 62.5
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 5.8e-26 122.5 96 61.5
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 5.8e-26 122.5 96 62.5
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 5.8e-26 122.5 90 53.3
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 7.6e-26 122.1 89 61.8
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.0e-25 121.7 95 56.8
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 1.3e-25 121.3 96 61.5
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 1.7e-25 120.9 92 56.5
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 1.7e-25 120.9 96 61.5
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 1.7e-25 120.9 94 58.5
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.2e-25 120.6 96 54.2
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.9e-25 120.2 93 54.8
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 3.8e-25 119.8 96 61.5
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 3.8e-25 119.8 86 62.8
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 3.8e-25 119.8 84 63.1
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 4.9e-25 119.4 96 60.4
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 4.9e-25 119.4 88 58.0
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.1e-24 118.2 87 62.1
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.1e-24 118.2 87 62.1
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 1.4e-24 117.9 96 54.2
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 1.9e-24 117.5 93 54.8
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 1.9e-24 117.5 94 57.4
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 2.5e-24 117.1 88 56.8
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 2.5e-24 117.1 84 64.3
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 3.2e-24 116.7 85 58.8
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 4.2e-24 116.3 84 61.9
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 7.1e-24 115.5 95 52.6
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 7.1e-24 115.5 95 57.9
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 9.3e-24 115.2 93 60.2
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 9.3e-24 115.2 93 60.2
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 9.3e-24 115.2 92 56.5
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 1.6e-23 114.4 86 59.3
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.1e-23 114.0 87 55.2
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 2.7e-23 113.6 91 54.9
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 2.7e-23 113.6 96 55.2
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 3.5e-23 113.2 96 56.2
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 6.1e-23 112.5 90 61.1
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 7.9e-23 112.1 90 53.3
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 7.9e-23 112.1 90 53.3
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 1.3e-22 111.3 94 55.3
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.3e-22 110.5 83 55.4
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 3.9e-22 109.8 86 58.1
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 6.7e-22 109.0 72 66.7
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 8.7e-22 108.6 91 51.6
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 1.5e-21 107.8 71 70.4
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 3.3e-21 106.7 88 51.1
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 4.3e-21 106.3 74 64.9
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 7.4e-21 105.5 88 52.3
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 2.2e-20 104.0 84 52.4
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 6.3e-20 102.4 86 51.2
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 6.3e-20 102.4 99 48.5
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 8.2e-20 102.1 95 52.6
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 4.1e-19 99.8 95 47.4
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 6.9e-19 99.0 90 47.8
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 9.0e-19 98.6 72 59.7
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 9.0e-19 98.6 76 57.9
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 1.5e-18 97.8 71 57.7
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 1.3e-17 94.7 81 50.6
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 6.5e-17 92.4 70 65.7
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 6.5e-17 92.4 87 49.4
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 6.5e-17 92.4 94 45.7
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 1.4e-16 91.3 65 64.6
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 5.5e-16 89.4 69 59.4
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 1.2e-15 88.2 80 50.0
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 6.7e-14 82.4 95 41.1
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 7.4e-13 79.0 87 41.4
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 1.8e-11 74.3 86 41.9
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 1.5e-10 71.2 87 42.5
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 2.0e-10 70.9 51 58.8
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.5e-10 69.7 57 50.9
CDE07G1026 Ceratophyllum demersum HOM05D007545 ORTHO05D009579 1.9e-08 64.3 47 57.4
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 7.2e-08 62.4 94 34.0
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 3.0e-06 57.0 72 36.1


User provided reference genes

Program Settings