Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 4.5e-90 334.7 186 100.0
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 5.2e-46 188.3 186 68.3
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 3.3e-45 185.7 186 70.4
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 1.6e-39 166.8 186 64.5
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 2.7e-34 149.4 169 62.7
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.5e-24 116.3 162 51.2
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 3.3e-24 115.9 159 50.9
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.2e-23 114.0 165 50.3
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 1.6e-23 113.6 177 56.5
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 3.6e-23 112.5 165 49.7
Gorai.002G141100 Gossypium raimondii HOM05D008046 ORTHO05D004477 4.7e-23 112.1 161 55.3
Gorai.005G094600 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.4e-22 110.5 166 57.2
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.4e-22 110.5 169 53.3
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 4.4e-21 105.5 162 56.2
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 1.3e-20 104.0 158 53.2
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 1.3e-20 104.0 158 53.2
Gohir.A02G076800 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.8e-20 102.8 166 56.6
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 2.8e-20 102.8 172 53.5
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 4.9e-20 102.1 177 48.6
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 4.9e-20 102.1 156 55.1
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.1e-19 100.9 184 49.5
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 5.4e-19 98.6 178 53.9
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 7.0e-19 98.2 175 42.9
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.2e-18 97.4 173 42.8
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 1.6e-18 97.1 175 49.1
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.9e-17 92.8 172 50.6
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 2.9e-17 92.8 162 51.2
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 2.9e-17 92.8 170 48.2
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 3.9e-17 92.4 182 47.8
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 5.0e-17 92.0 172 50.6
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 7.3e-16 88.2 183 47.0
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 1.2e-15 87.4 174 45.4
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 1.2e-15 87.4 166 48.8
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 2.1e-15 86.7 170 50.6
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.3e-14 83.2 164 47.0
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.3e-14 83.2 164 47.6
Cpa.g.sc36.179 Carica papaya HOM05D008046 ORTHO05D004477 4.0e-14 82.4 176 46.6
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 4.0e-14 82.4 186 45.7
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 8.9e-14 81.3 189 43.9
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 2.0e-13 80.1 171 46.2
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 5.8e-13 78.6 142 47.2
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 9.8e-13 77.8 152 42.1
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 1.3e-12 77.4 160 43.1
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 2.2e-12 76.6 149 47.7
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 2.9e-12 76.3 129 41.9
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 3.7e-12 75.9 184 43.5
Medtr3g099490 Medicago truncatula HOM05D008046 ORTHO05D004477 4.9e-12 75.5 137 48.9
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 8.3e-12 74.7 153 49.0
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 1.1e-11 74.3 161 46.6
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.4e-11 73.9 159 46.5
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 3.2e-11 72.8 164 40.9
Psat0s5249g0040 Pisum sativum HOM05D008046 ORTHO05D004477 4.1e-11 72.4 141 47.5
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 4.1e-11 72.4 159 41.5
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 4.1e-11 72.4 151 46.4
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 5.4e-11 72.0 168 45.2
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.0e-11 71.6 174 44.3
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.0e-11 71.6 174 44.3
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 9.2e-11 71.2 174 44.8
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 9.2e-11 71.2 155 38.7
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.2e-10 70.9 174 44.3
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 1.2e-10 70.9 128 48.4
RcHm_v2.0_Chr7g0242321 Rosa chinensis HOM05D018381 ORTHO05D004477 2.0e-10 70.1 176 42.0
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 2.7e-10 69.7 174 44.3
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 2.7e-10 69.7 152 38.8
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 7.8e-10 68.2 144 35.4
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 1.3e-09 67.4 156 45.5
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 1.7e-09 67.0 113 51.3
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 3.0e-09 66.2 110 44.5
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 5.0e-09 65.5 159 44.0
Gohir.A06G033600 Gossypium hirsutum HOM05D037684 ORTHO05D004477 6.6e-09 65.1 119 46.2
Gohir.D06G034500 Gossypium hirsutum HOM05D037684 ORTHO05D004477 1.1e-08 64.3 119 48.7
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 1.5e-08 63.9 166 31.9
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 1.5e-08 63.9 159 37.1
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 1.9e-08 63.5 160 34.4
Gorai.010G038000 Gossypium raimondii HOM05D037684 ORTHO05D004477 1.9e-08 63.5 119 48.7
Solyc04g074680.1 Solanum lycopersicum HOM05D010872 ORTHO05D004477 1.9e-08 63.5 159 45.9
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.5e-08 63.2 150 44.0
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 4.3e-08 62.4 131 45.8
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 2.8e-07 59.7 142 38.0
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 2.8e-07 59.7 152 43.4
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 8.0e-07 58.2 155 33.5
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 1.4e-06 57.4 170 38.8
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 1.8e-06 57.0 192 40.6
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.8e-06 57.0 140 33.6
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 1.8e-06 57.0 148 32.4
PGSC0003DMG400017769 Solanum tuberosum HOM05D059644 ORTHO05D004477 1.8e-06 57.0 133 42.1
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 2.3e-06 56.6 137 35.8
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 2.3e-06 56.6 143 31.5
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 3.1e-06 56.2 169 32.0
Thhalv10009293m.g Eutrema salsugineum HOM05D009138 ORTHO05D011294 5.2e-06 55.5 33 69.7
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 5.2e-06 55.5 151 34.4
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 5.2e-06 55.5 143 31.5
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 6.8e-06 55.1 182 35.7
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 6.8e-06 55.1 149 36.9
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 6.8e-06 55.1 144 34.0
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 6.8e-06 55.1 166 33.1
A09p42310 Brassica napus HOM05D009138 ORTHO05D011294 8.9e-06 54.7 71 40.8
BraA09t39712Z Brassica rapa HOM05D009138 ORTHO05D011294 8.9e-06 54.7 71 40.8
CARHR287280 Cardamine hirsuta HOM05D010872 ORTHO05D013672 8.9e-06 54.7 43 58.1


User provided reference genes

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