Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_10908 Corchorus olitorius HOM05D007775 ORTHO05D009858 6.7e-37 156.8 75 100.0
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 3.0e-21 104.8 80 68.8
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 1.6e-17 92.4 71 62.0
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 2.0e-17 92.0 81 58.0
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 2.0e-17 92.0 81 58.0
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 4.5e-17 90.9 81 56.8
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 2.9e-16 88.2 81 56.8
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 3.8e-16 87.8 76 59.2
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 1.2e-14 82.8 66 60.6
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 1.6e-14 82.4 75 54.7
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 1.6e-14 82.4 75 54.7
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 1.6e-14 82.4 81 51.9
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 2.1e-14 82.0 81 51.9
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 2.7e-14 81.6 63 58.7
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 3.6e-14 81.3 77 55.8
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 8.0e-14 80.1 81 51.9
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 8.0e-14 80.1 81 51.9
FAN12G2785 Fragaria x ananassa HOM05D007775 ORTHO05D009858 8.0e-14 80.1 81 51.9
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 8.0e-14 80.1 84 50.0
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 1.0e-13 79.7 81 53.1
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 2.3e-13 78.6 80 50.0
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 5.2e-13 77.4 85 50.6
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 5.2e-13 77.4 63 55.6
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 6.8e-13 77.0 85 45.9
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 8.8e-13 76.6 74 51.4
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 1.2e-12 76.3 73 49.3
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 2.0e-12 75.5 79 48.1
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 2.6e-12 75.1 67 50.7
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 7.5e-12 73.6 66 51.5
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 9.7e-12 73.2 72 44.4
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 9.7e-12 73.2 64 54.7
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 9.7e-12 73.2 72 50.0
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 1.3e-11 72.8 73 49.3
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 1.3e-11 72.8 70 48.6
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 1.7e-11 72.4 74 47.3
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 2.2e-11 72.0 70 44.3
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 4.8e-11 70.9 72 43.1
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 6.3e-11 70.5 65 50.8
BcaC02g12905 Brassica carinata HOM05D007775 ORTHO05D009858 6.3e-11 70.5 64 51.6
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 6.3e-11 70.5 72 50.0
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 6.3e-11 70.5 78 46.2
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 1.8e-10 68.9 64 51.6
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 3.1e-10 68.2 64 48.4
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 3.1e-10 68.2 49 55.1
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 3.1e-10 68.2 61 49.2
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 4.1e-10 67.8 85 44.7
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 4.1e-10 67.8 60 50.0
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 7.0e-10 67.0 84 42.9
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 7.0e-10 67.0 61 49.2
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 9.1e-10 66.6 87 43.7
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 1.2e-09 66.2 66 43.9
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 1.6e-09 65.9 85 43.5
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 2.0e-09 65.5 63 49.2
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 2.0e-09 65.5 63 49.2
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 2.0e-09 65.5 68 47.1
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 2.0e-09 65.5 58 50.0
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 2.7e-09 65.1 68 48.5
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 2.7e-09 65.1 58 48.3
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 3.5e-09 64.7 73 46.6
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 4.5e-09 64.3 85 40.0
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 4.5e-09 64.3 58 48.3
MSTRG.10078 Avicennia marina HOM05D007775 ORTHO05D009858 5.9e-09 63.9 61 44.3
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 7.7e-09 63.5 75 45.3
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 1.3e-08 62.8 65 44.6
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 1.3e-08 62.8 61 49.2
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 1.7e-08 62.4 66 45.5
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 1.7e-08 62.4 65 43.1
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 2.9e-08 61.6 77 41.6
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 8.5e-08 60.1 82 41.5
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 1.2e-06 56.2 58 44.8


User provided reference genes

Program Settings