Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_10625 Corchorus olitorius HOM05D000283 ORTHO05D006673 3.1e-36 154.5 69 100.0
COL.COLO4_26050 Corchorus olitorius HOM05D000283 ORTHO05D006673 3.1e-36 154.5 69 100.0
COL.COLO4_31476 Corchorus olitorius HOM05D000283 ORTHO05D006673 7.5e-35 149.8 68 97.1
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 6.6e-15 83.6 43 88.4
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 1.3e-13 79.3 43 81.4
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 1.6e-13 79.0 43 81.4
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 1.6e-13 79.0 43 81.4
Atru.chr12.593 Acer truncatum HOM05D000283 ORTHO05D006673 2.8e-13 78.2 43 79.1
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 1.4e-12 75.9 43 83.7
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 6.9e-12 73.6 43 74.4
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 1.3e-10 69.3 43 74.4
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.9e-10 68.2 43 72.1
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.9e-10 68.2 43 72.1
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 3.8e-10 67.8 43 72.1
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 1.1e-09 66.2 43 72.1
CANSAT56G3782 Cannabis sativa HOM05D000283 ORTHO05D006673 1.4e-09 65.9 43 69.8
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 1.9e-09 65.5 43 72.1
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 3.2e-09 64.7 43 65.1
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 5.4e-09 63.9 44 70.5
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 7.1e-09 63.5 35 80.0
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 9.3e-09 63.2 40 67.5
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 9.3e-09 63.2 43 62.8
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 9.3e-09 63.2 43 67.4
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 1.2e-08 62.8 43 65.1
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 1.2e-08 62.8 43 65.1
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 1.2e-08 62.8 43 65.1
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 1.2e-08 62.8 43 65.1
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 1.2e-08 62.8 40 72.5
Sabra08G0033700 Salix brachista HOM05D000283 ORTHO05D006673 1.6e-08 62.4 43 69.8
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 2.7e-08 61.6 35 77.1
Potri.008G047600 Populus trichocarpa HOM05D000283 ORTHO05D006673 2.7e-08 61.6 43 72.1
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 3.5e-08 61.2 43 65.1
Potri.010G213800 Populus trichocarpa HOM05D000283 ORTHO05D006673 6.0e-08 60.5 43 65.1
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 6.0e-08 60.5 43 69.8
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 6.0e-08 60.5 39 66.7
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 7.9e-08 60.1 43 67.4
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.3e-07 59.3 43 65.1
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 1.3e-07 59.3 43 65.1
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 1.3e-07 59.3 43 67.4
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 1.3e-07 59.3 35 74.3
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 3.0e-07 58.2 42 61.9
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 3.9e-07 57.8 39 71.8
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 3.9e-07 57.8 39 71.8
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 5.1e-07 57.4 48 62.5
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 8.7e-07 56.6 43 62.8
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 1.5e-06 55.8 36 72.2
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 3.3e-06 54.7 46 60.9
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 4.3e-06 54.3 43 53.5


User provided reference genes

Program Settings