Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 3.8e-93 345.1 212 100.0
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.0e-78 296.2 213 78.4
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 3.2e-76 288.9 213 76.5
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 4.2e-76 288.5 213 76.5
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 1.3e-74 283.5 212 75.5
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 9.0e-71 270.8 225 68.4
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 3.3e-65 252.3 208 70.7
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.6e-64 250.0 218 67.4
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.1e-63 247.3 213 69.5
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 4.1e-63 245.4 225 64.9
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 6.9e-63 244.6 204 69.6
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 2.0e-62 243.0 225 64.4
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 2.6e-62 242.7 222 64.0
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 3.4e-62 242.3 209 65.6
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 7.6e-62 241.1 206 66.5
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 1.3e-61 240.4 207 66.7
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 2.2e-61 239.6 182 74.2
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 5.0e-61 238.4 180 73.3
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 6.5e-61 238.0 170 75.9
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 6.5e-61 238.0 205 66.8
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 8.4e-61 237.7 224 62.9
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.1e-60 237.3 226 65.0
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.4e-60 236.9 194 70.1
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 4.2e-60 235.3 191 70.2
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 4.2e-60 235.3 219 65.8
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 4.2e-60 235.3 201 66.7
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 5.5e-60 235.0 210 65.2
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 5.5e-60 235.0 208 65.9
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 7.2e-60 234.6 168 75.0
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 7.2e-60 234.6 168 75.0
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 9.3e-60 234.2 226 64.2
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 1.2e-59 233.8 219 65.3
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.6e-59 233.4 217 65.4
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.6e-59 233.4 219 65.8
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.6e-59 233.4 184 72.3
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 2.1e-59 233.0 190 69.5
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.7e-59 232.6 202 66.3
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 2.7e-59 232.6 225 62.7
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 3.5e-59 232.3 165 76.4
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 4.6e-59 231.9 165 76.4
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 4.6e-59 231.9 169 75.1
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 4.6e-59 231.9 169 75.1
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 7.9e-59 231.1 169 75.7
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.3e-58 230.3 165 76.4
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 1.8e-58 229.9 167 76.6
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 2.3e-58 229.6 176 75.0
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 3.9e-58 228.8 172 76.2
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 3.9e-58 228.8 176 75.0
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 6.7e-58 228.0 193 70.5
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 8.7e-58 227.6 142 85.2
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 8.7e-58 227.6 193 69.9
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 1.1e-57 227.3 207 64.3
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 1.1e-57 227.3 139 87.1
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.1e-57 227.3 139 87.1
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.1e-57 227.3 191 70.2
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.9e-57 226.5 165 75.2
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 1.9e-57 226.5 162 77.2
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 2.5e-57 226.1 136 89.0
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 2.5e-57 226.1 193 68.4
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 5.7e-57 224.9 154 76.6
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 7.4e-57 224.6 140 85.0
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 9.7e-57 224.2 162 75.9
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 9.7e-57 224.2 184 71.2
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 1.3e-56 223.8 212 63.7
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.6e-56 223.4 199 67.3
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 2.2e-56 223.0 154 76.0
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.8e-56 222.6 158 77.2
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 3.7e-56 222.2 132 90.2
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.7e-56 222.2 167 74.9
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 4.8e-56 221.9 182 69.8
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 8.2e-56 221.1 184 70.7
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.1e-55 220.7 170 72.9
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.4e-55 220.3 143 83.2
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 2.4e-55 219.5 139 82.0
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 4.1e-55 218.8 176 68.8
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 4.1e-55 218.8 152 78.3
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 4.1e-55 218.8 135 85.2
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 4.1e-55 218.8 138 81.9
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 9.0e-55 217.6 134 85.1
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 9.0e-55 217.6 144 79.9
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 1.2e-54 217.2 126 90.5
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.5e-54 216.9 131 87.8
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 2.0e-54 216.5 141 80.1
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 4.5e-54 215.3 250 56.0
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 1.7e-53 213.4 163 69.3
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 2.9e-53 212.6 180 69.4
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 3.8e-53 212.2 137 81.8
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 5.0e-53 211.8 148 74.3
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 6.5e-53 211.5 134 81.3
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 8.5e-53 211.1 163 68.7
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 2.5e-52 209.5 159 74.2
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.1e-51 206.5 122 89.3
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.1e-51 206.5 122 89.3
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 2.7e-51 206.1 160 72.5
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 6.1e-51 204.9 124 88.7
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 2.0e-49 199.9 135 76.3
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 2.0e-49 199.9 156 71.2
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.5e-49 199.5 139 74.8
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 2.5e-49 199.5 191 59.7
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 2.4e-47 193.0 147 72.8
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 3.1e-47 192.6 133 72.9
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 8.5e-45 184.5 139 66.2
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 8.5e-45 184.5 125 83.2
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 3.2e-44 182.6 109 89.9
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 3.6e-43 179.1 135 65.2
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 1.1e-41 174.1 230 49.1
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 2.0e-41 173.3 139 62.6
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.8e-39 166.8 132 62.9
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 2.9e-37 159.5 101 80.2
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 1.7e-32 143.7 133 54.9
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 2.3e-26 123.2 98 64.3
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.5e-25 120.6 135 47.4
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 2.6e-25 119.8 73 83.6
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 4.4e-25 119.0 70 85.7
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 4.4e-25 119.0 167 48.5
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 4.8e-24 115.5 95 67.4
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 1.6e-22 110.5 145 42.8
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 3.2e-20 102.8 98 59.2
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 4.7e-19 99.0 61 82.0
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 1.8e-18 97.1 71 74.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 1.8e-10 70.5 56 62.5


User provided reference genes

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