Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 3.5e-186 654.8 331 100.0
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.3e-164 583.2 331 85.5
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 3.5e-162 575.1 331 85.2
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.2e-150 534.6 331 79.5
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 5.2e-150 534.6 331 79.5
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 2.5e-144 515.8 318 78.9
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 4.4e-141 505.0 343 73.2
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 3.7e-140 501.9 343 72.9
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.4e-139 500.0 342 73.1
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 7.1e-139 497.7 347 72.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 3.5e-138 495.4 336 72.6
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 3.9e-137 491.9 337 72.4
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.9e-136 489.6 336 72.3
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 3.6e-135 485.3 335 71.9
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 4.0e-134 481.9 343 70.0
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 5.2e-134 481.5 345 73.6
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 9.9e-133 477.2 339 70.8
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 2.9e-132 475.7 333 74.2
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 6.4e-132 474.6 336 70.8
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.2e-131 471.9 339 70.5
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 3.9e-129 465.3 335 68.1
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 4.3e-128 461.8 337 67.1
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 4.3e-128 461.8 336 67.3
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 5.6e-128 461.5 331 68.9
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 7.3e-128 461.1 338 68.3
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.8e-127 459.1 353 65.7
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 8.1e-127 457.6 339 67.6
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 3.1e-126 455.7 331 65.9
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 9.0e-126 454.1 331 65.6
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 9.0e-126 454.1 322 67.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 1.5e-125 453.4 300 70.7
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.0e-125 453.0 336 65.5
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.0e-125 453.0 335 66.9
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.6e-125 452.6 331 66.8
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 4.4e-125 451.8 340 65.9
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 9.9e-125 450.7 313 71.6
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.3e-124 450.3 330 67.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.7e-124 449.9 356 63.8
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 3.8e-124 448.7 299 70.6
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 4.9e-124 448.4 336 70.2
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.4e-123 446.8 334 66.8
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.4e-123 446.8 343 64.1
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.9e-123 446.4 340 64.7
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 2.4e-123 446.0 341 66.3
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.2e-123 445.3 291 71.1
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 5.4e-123 444.9 340 65.6
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 5.4e-123 444.9 298 70.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 5.4e-123 444.9 340 66.2
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 9.3e-123 444.1 332 66.6
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.2e-122 443.7 338 64.2
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.6e-122 443.4 357 64.1
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 2.7e-122 442.6 364 63.5
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 2.7e-122 442.6 343 64.1
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.5e-122 442.2 356 62.9
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.5e-122 442.2 296 69.9
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 4.6e-122 441.8 340 63.8
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.9e-121 438.7 305 71.1
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 6.6e-121 438.0 340 65.9
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 6.6e-121 438.0 335 63.9
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 8.7e-121 437.6 340 65.9
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.1e-120 437.2 349 65.0
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.9e-120 436.4 328 66.2
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 2.5e-120 436.0 308 67.2
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 4.3e-120 435.3 328 64.3
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.3e-119 433.7 337 63.8
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 4.8e-119 431.8 339 64.3
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 1.1e-118 430.6 300 67.0
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.8e-118 429.9 284 70.8
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.8e-118 429.9 302 67.2
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 5.3e-118 428.3 353 60.6
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.3e-118 428.3 343 62.7
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.2e-117 427.2 299 67.2
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.7e-116 423.3 301 67.1
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.7e-116 423.3 345 64.3
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.1e-115 420.6 341 63.0
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.6e-114 416.8 299 69.2
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.5e-114 415.6 342 63.2
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.5e-114 415.6 342 63.2
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 3.5e-114 415.6 282 70.2
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 1.3e-113 413.7 344 61.0
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.3e-113 413.7 348 60.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 3.0e-113 412.5 347 60.8
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.5e-112 410.2 302 67.2
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 1.5e-109 400.2 309 64.4
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.9e-108 396.0 289 65.7
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.9e-108 396.0 337 58.5
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 3.8e-108 395.6 318 64.2
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 4.2e-107 392.1 305 64.3
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 7.1e-107 391.3 338 59.2
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.3e-103 378.3 215 80.5
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 6.9e-102 374.8 306 58.5
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 9.0e-102 374.4 265 65.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 3.4e-101 372.5 286 65.7
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 3.2e-99 365.9 268 66.0
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.5e-99 365.2 307 60.6
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 5.1e-97 358.6 268 63.4
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 8.7e-97 357.8 275 65.5
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 5.9e-93 345.1 350 51.4
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.1e-88 330.9 306 53.3
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 9.1e-86 321.2 241 66.4
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 4.5e-85 318.9 342 50.9
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.4e-72 275.8 224 65.2
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.3e-71 274.2 290 48.3
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 6.3e-71 271.9 296 46.6
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 4.1e-70 269.2 289 47.8
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 9.1e-70 268.1 342 41.5
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 8.0e-66 255.0 237 59.1
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.2e-64 251.1 220 60.0
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.7e-63 246.1 181 65.2
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 5.9e-61 238.8 299 45.2
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 5.0e-60 235.7 247 44.9
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.0e-52 209.1 270 43.0
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 6.8e-49 198.7 307 37.8
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 8.3e-47 191.8 160 55.6
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.5e-35 153.7 158 55.1
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 4.3e-35 152.9 136 61.0
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.3e-31 141.4 114 56.1
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 6.0e-21 105.9 145 46.2
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.7e-15 87.8 122 45.1
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 2.5e-11 73.9 42 76.2
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 2.4e-09 67.4 101 40.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.4e-08 63.5 34 79.4
SMO172G0225 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 4.9e-07 59.7 126 34.1


User provided reference genes

Program Settings