Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.0e-134 483.4 244 100.0
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 6.9e-99 364.4 258 80.6
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 5.1e-78 295.0 261 67.0
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 2.2e-76 289.7 261 65.9
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 1.5e-74 283.5 261 64.8
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 8.8e-70 267.7 257 62.6
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.0e-69 266.5 258 62.0
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.7e-68 262.3 258 61.2
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.7e-57 226.9 261 56.7
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.5e-56 223.0 261 55.6
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.2e-56 222.6 261 55.9
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 5.5e-56 221.9 141 83.7
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.7e-47 192.2 262 50.8
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 3.0e-46 189.5 259 47.9
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.3e-44 184.1 266 48.1
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.7e-41 173.7 263 46.4
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.0e-38 162.9 263 46.4
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.2e-37 161.0 252 46.4
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.4e-35 154.1 267 42.7
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 3.1e-35 152.9 269 41.3
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 4.5e-34 149.1 258 42.2
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 8.6e-33 144.8 270 41.1
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 2.8e-31 139.8 262 42.0
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 2.8e-31 139.8 265 41.5
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 8.0e-31 138.3 230 44.3
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 2.3e-30 136.7 258 39.1
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 3.1e-30 136.3 219 43.8
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 5.2e-30 135.6 264 38.3
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.2e-28 130.2 262 38.5
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.4e-27 127.5 260 39.2
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 1.4e-27 127.5 259 40.5
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.6e-26 124.0 262 37.4
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.3e-24 115.9 262 39.3
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 7.3e-24 115.2 264 39.0
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 3.6e-23 112.8 247 39.3
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.1e-22 111.3 255 36.5
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 6.8e-22 108.6 234 35.5
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 1.5e-21 107.5 260 38.5
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 2.0e-21 107.1 277 35.7
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.4e-21 105.9 198 43.4
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 5.8e-21 105.5 257 34.6
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 1.7e-20 104.0 255 35.3
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 4.9e-20 102.4 266 36.5
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 6.4e-20 102.1 266 35.3
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 1.1e-19 101.3 284 34.2
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 1.1e-19 101.3 237 36.3
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 1.9e-19 100.5 271 34.7
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 3.2e-19 99.8 165 42.4
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 3.2e-19 99.8 264 36.4
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 5.4e-19 99.0 228 37.3
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 5.4e-19 99.0 266 34.2
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 7.0e-19 98.6 214 36.4
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 7.0e-19 98.6 229 36.2
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 1.2e-18 97.8 264 36.0
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 1.2e-18 97.8 237 36.3
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 1.2e-18 97.8 258 35.7
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 2.1e-18 97.1 261 34.1
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.7e-18 96.7 275 32.0
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 4.6e-18 95.9 254 34.3
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.7e-17 94.0 261 33.3
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 2.3e-17 93.6 261 34.9
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.0e-17 93.2 261 34.5
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.0e-17 93.2 261 33.3
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.0e-17 93.2 222 36.0
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 5.1e-17 92.4 262 32.8
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 5.1e-17 92.4 237 35.0
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 1.9e-16 90.5 262 32.4
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 1.9e-16 90.5 271 32.1
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 1.9e-16 90.5 259 32.4
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.3e-16 89.4 201 39.3
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 7.3e-16 88.6 180 37.8
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 9.5e-16 88.2 255 33.7
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 9.5e-16 88.2 195 39.5
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.2e-15 87.8 266 32.0
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 2.1e-15 87.0 255 31.4
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 3.6e-15 86.3 278 32.0
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 4.7e-15 85.9 221 32.6
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 6.2e-15 85.5 192 36.5
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 6.2e-15 85.5 192 36.5
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.1e-14 84.7 261 31.8
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 2.3e-14 83.6 258 32.9
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 8.9e-14 81.6 254 31.5
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.5e-13 80.9 262 30.9
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 2.6e-13 80.1 261 30.7
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 7.5e-13 78.6 257 31.1
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 9.9e-13 78.2 259 28.6
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.3e-12 77.8 222 33.8
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.7e-12 77.4 262 30.2
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.2e-12 77.0 252 30.6
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 3.7e-12 76.3 261 33.3
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 6.4e-12 75.5 261 34.1
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 8.3e-12 75.1 206 32.0
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 8.3e-12 75.1 259 30.1
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 3.2e-11 73.2 258 32.2
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 4.1e-11 72.8 261 33.0
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 5.4e-11 72.4 227 31.3
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 2.7e-10 70.1 266 30.5
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 2.7e-10 70.1 225 33.8
COL.COLO4_22751 Corchorus olitorius HOM05D043619 ORTHO05D007787 4.6e-10 69.3 159 38.4
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 4.6e-10 69.3 270 30.4
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 1.0e-09 68.2 217 32.7
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 6.6e-09 65.5 224 32.6
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 2.5e-08 63.5 245 29.4
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.5e-08 63.5 245 29.4
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 7.3e-08 62.0 242 28.1
FAN05G2781 Fragaria x ananassa HOM05D000001 ORTHO05D009295 9.5e-08 61.6 245 30.6
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.8e-07 60.1 207 30.9
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 3.6e-07 59.7 187 29.4
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.8e-06 57.4 151 34.4


User provided reference genes

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