Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_09566 Corchorus olitorius HOM05D000264 ORTHO05D000152 5.8e-85 317.8 192 100.0
COL.COLO4_10465 Corchorus olitorius HOM05D000264 ORTHO05D000152 5.0e-36 155.2 191 47.6
COL.COLO4_06678 Corchorus olitorius HOM05D000264 ORTHO05D000152 4.8e-31 138.7 188 58.0
Thecc.07G042100 Theobroma cacao HOM05D000264 ORTHO05D000152 4.8e-31 138.7 188 51.1
Thecc.07G053100 Theobroma cacao HOM05D000264 ORTHO05D000152 1.3e-28 130.6 174 52.9
Duzib068G1351 Durio zibethinus HOM05D000264 ORTHO05D000152 1.0e-25 120.9 194 55.7
Thecc.03G239700 Theobroma cacao HOM05D000264 ORTHO05D000152 1.5e-24 117.1 189 54.5
Gohir.A08G162800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.7e-23 113.6 187 52.4
Gorai.004G191800 Gossypium raimondii HOM05D000264 ORTHO05D000152 4.8e-23 112.1 187 52.4
Atru.chr2.3228 Acer truncatum HOM05D000264 ORTHO05D000152 4.4e-16 89.0 197 31.5
Dinv40710 Davidia involucrata HOM05D000264 ORTHO05D000152 4.5e-13 79.0 191 29.3
TAR376G1123 Trochodendron aralioides HOM05D000264 ORTHO05D000152 7.8e-13 78.2 204 34.8
MBI02_g18415_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 1.3e-12 77.4 203 34.0
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.7e-12 77.0 204 28.9
Dinv40709 Davidia involucrata HOM05D000264 ORTHO05D000152 2.9e-12 76.3 195 35.4
Hma1.2p1_1276F.1_g272240 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.5e-11 73.9 202 31.2
Prupe.4G203500 Prunus persica HOM05D000264 ORTHO05D000152 3.3e-11 72.8 200 25.5
CAN.G694.52 Capsicum annuum HOM05D000264 ORTHO05D000152 4.3e-11 72.4 191 31.4
MD11G1226900 Malus domestica HOM05D000264 ORTHO05D000152 5.6e-11 72.0 197 39.6
Nn1g06999 Nelumbo nucifera HOM05D000264 ORTHO05D000152 7.3e-11 71.6 204 34.8
CAN.G694.56 Capsicum annuum HOM05D000264 ORTHO05D000152 9.5e-11 71.2 195 33.3
CAN.G694.73 Capsicum annuum HOM05D000264 ORTHO05D000152 9.5e-11 71.2 193 28.0
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 9.5e-11 71.2 201 29.4
Prupe.4G203600 Prunus persica HOM05D000264 ORTHO05D000152 9.5e-11 71.2 197 25.9
PGR083G1266 Punica granatum HOM05D000047 ORTHO05D000152 9.5e-11 71.2 200 33.0
TAR628G0075 Trochodendron aralioides HOM05D000264 ORTHO05D000152 9.5e-11 71.2 205 25.9
Gorai.002G082500 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.2e-10 70.9 155 31.0
Prupe.4G202900 Prunus persica HOM05D000264 ORTHO05D000152 1.2e-10 70.9 197 25.4
Prupe.4G202700 Prunus persica HOM05D000264 ORTHO05D000152 1.6e-10 70.5 201 24.4
QL03p028282 Quercus lobata HOM05D000264 ORTHO05D000152 1.6e-10 70.5 166 42.8
PGR083G2206 Punica granatum HOM05D000264 ORTHO05D000152 2.1e-10 70.1 200 28.0
Actinidia09965 Actinidia chinensis HOM05D000264 ORTHO05D000152 3.6e-10 69.3 202 32.7
TAR626G0932 Trochodendron aralioides HOM05D000264 ORTHO05D000152 3.6e-10 69.3 88 40.9
TAR628G1506 Trochodendron aralioides HOM05D000264 ORTHO05D000152 3.6e-10 69.3 194 26.8
Hma1.2p1_1193F.1_g265581 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 6.1e-10 68.6 201 29.9
CAN.G694.51 Capsicum annuum HOM05D000264 ORTHO05D000152 1.0e-09 67.8 195 26.2
Ciclev10007797m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.0e-09 67.8 194 30.9
Ciclev10007844m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.0e-09 67.8 209 27.3
Eucgr.F00986 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.0e-09 67.8 196 34.2
CAN.G449.15 Capsicum annuum HOM05D000264 ORTHO05D000152 1.4e-09 67.4 192 26.0
Hma1.2p1_1193F.1_g265570 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.4e-09 67.4 201 30.8
Prupe.4G203100 Prunus persica HOM05D000264 ORTHO05D000152 1.4e-09 67.4 197 24.9
Nn1g06590 Nelumbo nucifera HOM05D000264 ORTHO05D000152 1.8e-09 67.0 155 31.0
Ciclev10007841m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.3e-09 66.6 204 29.4
Sabra11G0120000 Salix brachista HOM05D000264 ORTHO05D000152 2.3e-09 66.6 197 37.6
CSS0001170 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.1e-09 66.2 183 38.3
Eucgr.C00691 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.1e-09 66.2 191 35.1
Duzib177G0309 Durio zibethinus HOM05D000264 ORTHO05D000152 4.0e-09 65.9 193 26.4
Prupe.4G203800 Prunus persica HOM05D000264 ORTHO05D000152 4.0e-09 65.9 188 26.1
TAR624G0511 Trochodendron aralioides HOM05D000264 ORTHO05D000152 4.0e-09 65.9 185 27.0
TAR626G1363 Trochodendron aralioides HOM05D000264 ORTHO05D000152 4.0e-09 65.9 189 36.5
CAN.G694.59 Capsicum annuum HOM05D000264 ORTHO05D000152 5.2e-09 65.5 190 30.5
Hma1.2p1_1193F.1_g265660 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 5.2e-09 65.5 198 28.8
CAN.G208.90 Capsicum annuum HOM05D000264 ORTHO05D000152 8.9e-09 64.7 190 25.8
CAN.G404.49 Capsicum annuum HOM05D000264 ORTHO05D000152 8.9e-09 64.7 199 26.1
CAN.G449.63 Capsicum annuum HOM05D000264 ORTHO05D000152 8.9e-09 64.7 196 26.0
MBI02_g34319_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 8.9e-09 64.7 182 34.1
Nitab4.5_0003058g0060 Nicotiana tabacum HOM05D000264 ORTHO05D000152 8.9e-09 64.7 188 32.4
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.2e-08 64.3 195 28.7
CAN.G449.41 Capsicum annuum HOM05D000264 ORTHO05D000152 1.2e-08 64.3 193 32.1
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 1.2e-08 64.3 200 28.5
Prupe.4G204100 Prunus persica HOM05D000264 ORTHO05D000152 1.2e-08 64.3 185 27.6
CSS0028907 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.5e-08 63.9 197 38.1
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 2.0e-08 63.5 200 28.5
Duzib177G0874 Durio zibethinus HOM05D000264 ORTHO05D000152 2.0e-08 63.5 199 25.6
MBI02_g34317_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 2.0e-08 63.5 141 28.4
Nitab4.5_0012130g0010 Nicotiana tabacum HOM05D000264 ORTHO05D000152 2.0e-08 63.5 196 26.0
Sabra11G0119800 Salix brachista HOM05D000264 ORTHO05D000152 2.0e-08 63.5 197 37.6
CAN.G1173.7 Capsicum annuum HOM05D000264 ORTHO05D000152 2.6e-08 63.2 197 27.9
TAR624G0934 Trochodendron aralioides HOM05D000264 ORTHO05D000152 2.6e-08 63.2 113 32.7
CAN.G694.66 Capsicum annuum HOM05D000264 ORTHO05D000152 4.4e-08 62.4 190 28.9
CAN.G208.89 Capsicum annuum HOM05D000264 ORTHO05D000152 5.8e-08 62.0 157 36.3
QL03p016541 Quercus lobata HOM05D000264 ORTHO05D000152 5.8e-08 62.0 194 24.7
RcHm_v2.0_Chr5g0027141 Rosa chinensis HOM05D000264 ORTHO05D000152 5.8e-08 62.0 204 24.5
Aqoxy1G04212 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 9.8e-08 61.2 200 29.5
Ciclev10004657m.g Citrus clementina HOM05D000264 ORTHO05D000152 9.8e-08 61.2 166 26.5
FAN26G1085 Fragaria x ananassa HOM05D000264 ORTHO05D000152 9.8e-08 61.2 154 32.5
CAN.G1342.5 Capsicum annuum HOM05D000264 ORTHO05D000152 1.3e-07 60.8 191 25.7
RcHm_v2.0_Chr5g0027111 Rosa chinensis HOM05D000264 ORTHO05D000152 2.2e-07 60.1 204 24.5
Lj6P649T13 Lonicera japonica HOM05D000264 ORTHO05D000152 3.7e-07 59.3 201 26.9
Ciclev10006527m.g Citrus clementina HOM05D000264 ORTHO05D000152 4.9e-07 58.9 166 25.9
Thecc.05G278000 Theobroma cacao HOM05D000264 ORTHO05D000152 4.9e-07 58.9 200 38.0
CiPaw.01G049800 Carya illinoinensis HOM05D000264 ORTHO05D000152 6.4e-07 58.5 182 26.9
Ciclev10007801m.g Citrus clementina HOM05D000264 ORTHO05D000152 6.4e-07 58.5 191 33.0
QL10p052455 Quercus lobata HOM05D000264 ORTHO05D000152 6.4e-07 58.5 162 28.4
Dinv40705 Davidia involucrata HOM05D000264 ORTHO05D000152 8.3e-07 58.2 207 26.6
FvH4_1g10390 Fragaria vesca HOM05D000264 ORTHO05D000152 8.3e-07 58.2 152 31.6
Hma1.2p1_1193F.1_g265580 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 8.3e-07 58.2 93 37.6
Sed0022421 Sechium edule HOM05D000264 ORTHO05D000152 8.3e-07 58.2 195 32.8
Ciclev10004698m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.1e-06 57.8 173 24.3
Lj6A647T16 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-06 57.8 194 27.8
CAN.G126.67 Capsicum annuum HOM05D000264 ORTHO05D000152 1.9e-06 57.0 177 24.3
CAN.G2142.1 Capsicum annuum HOM05D000264 ORTHO05D000152 1.9e-06 57.0 174 25.9
FvH4_1g18590 Fragaria vesca HOM05D000264 ORTHO05D000152 1.9e-06 57.0 204 24.0
FAN19G0588 Fragaria x ananassa HOM05D000264 ORTHO05D000152 1.9e-06 57.0 204 24.0
Hma1.2p1_1193F.1_g265650 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.9e-06 57.0 201 27.4
Lj6A655T45 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-06 57.0 194 25.8
Manes.09G150800 Manihot esculenta HOM05D000264 ORTHO05D000152 1.9e-06 57.0 192 25.5
Os11g0252400 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 1.9e-06 57.0 185 24.9
Sed0020174 Sechium edule HOM05D000264 ORTHO05D000152 1.9e-06 57.0 201 24.9
Solyc07g061750.4 Solanum lycopersicum HOM05D000264 ORTHO05D000152 1.9e-06 57.0 159 33.3
TAR636G3104 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.9e-06 57.0 203 25.6
CAN.G694.63 Capsicum annuum HOM05D000264 ORTHO05D000152 2.4e-06 56.6 193 24.9
Dinv14025 Davidia involucrata HOM05D000001 ORTHO05D000003 2.4e-06 56.6 193 24.9
RcHm_v2.0_Chr5g0037621 Rosa chinensis HOM05D000264 ORTHO05D000152 2.4e-06 56.6 195 29.7
Ah.02g116590 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.2e-06 56.2 86 37.2
Eucgr.D01246 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.2e-06 56.2 202 24.8
Eucgr.H02695 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.2e-06 56.2 199 26.6
Thhalv10020630m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 3.2e-06 56.2 192 25.5
Nitab4.5_0000804g0220 Nicotiana tabacum HOM05D000264 ORTHO05D000152 3.2e-06 56.2 95 34.7
Ciclev10010594m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.4e-06 55.5 87 39.1
Ciclev10016608m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.4e-06 55.5 172 25.6
Eucgr.K00701 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.4e-06 55.5 100 31.0
Os09g0331100 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 5.4e-06 55.5 179 28.5
vmacro22812 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 5.4e-06 55.5 168 23.2
GSVIVG01013569001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.4e-06 55.5 204 26.5
MELO3C004399.2 Cucumis melo HOM05D000264 ORTHO05D000152 7.0e-06 55.1 201 31.8
Eucgr.D01531 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.0e-06 55.1 207 22.2
FAN28G1654 Fragaria x ananassa HOM05D000264 ORTHO05D000152 7.0e-06 55.1 204 24.0
ATR0705G177 Amborella trichopoda HOM05D000480 ORTHO05D000313 9.2e-06 54.7 145 26.9
C03p36730 Brassica napus HOM05D000264 ORTHO05D000152 9.2e-06 54.7 162 31.5
BolC3t15987H Brassica oleracea HOM05D000264 ORTHO05D000152 9.2e-06 54.7 162 31.5
CAN.G694.74 Capsicum annuum HOM05D000264 ORTHO05D000152 9.2e-06 54.7 194 25.8
MBI02_g45931_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 9.2e-06 54.7 150 35.3
Prupe.4G202800 Prunus persica HOM05D000264 ORTHO05D000152 9.2e-06 54.7 181 22.7
Thecc.07G042200 Theobroma cacao HOM05D001273 ORTHO05D000023 9.2e-06 54.7 118 43.2


User provided reference genes

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