Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 6.3e-73 277.3 138 100.0
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 6.5e-54 214.2 138 75.4
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.5e-53 213.0 138 75.4
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-53 212.2 138 75.4
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-53 212.2 138 75.4
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 4.2e-53 211.5 138 79.0
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 2.7e-52 208.8 128 82.0
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.7e-49 199.5 138 72.5
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 2.4e-48 195.7 138 71.7
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 9.1e-48 193.7 138 68.1
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.7e-46 189.5 138 65.9
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 5.0e-46 188.0 138 65.2
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.9e-45 186.0 131 70.2
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.9e-45 186.0 131 67.9
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 2.5e-45 185.7 135 64.4
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 5.5e-45 184.5 138 65.9
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 5.5e-45 184.5 137 65.0
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 7.2e-45 184.1 138 68.1
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 9.4e-45 183.7 127 70.1
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 9.4e-45 183.7 128 67.2
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 4.7e-44 181.4 138 63.8
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 1.8e-43 179.5 132 62.9
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.8e-43 179.5 138 63.8
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 5.2e-43 177.9 129 67.4
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.5e-42 176.4 127 67.7
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 7.5e-42 174.1 126 65.1
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 9.8e-42 173.7 124 63.7
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.8e-42 173.7 127 65.4
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 9.8e-42 173.7 138 63.8
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 1.3e-41 173.3 130 60.0
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.3e-41 173.3 126 65.1
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.7e-41 172.9 126 61.1
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 2.2e-41 172.6 129 66.7
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 2.8e-41 172.2 129 67.4
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 3.7e-41 171.8 116 66.4
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 8.3e-41 170.6 128 67.2
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 8.3e-41 170.6 127 66.9
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.1e-40 170.2 126 60.3
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 3.1e-40 168.7 129 63.6
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 7.0e-40 167.5 124 62.9
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 1.2e-39 166.8 139 60.4
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 2.7e-39 165.6 139 59.7
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 2.7e-39 165.6 133 60.2
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 3.5e-39 165.2 136 59.6
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 4.5e-39 164.9 133 60.9
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 4.5e-39 164.9 125 64.8
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 1.7e-38 162.9 111 65.8
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 1.7e-38 162.9 123 61.0
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.0e-38 161.4 112 67.0
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 4.2e-37 158.3 127 64.6
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.2e-36 156.8 133 58.6
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.6e-36 156.4 119 59.7
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.6e-36 156.4 117 63.2
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.4e-35 153.3 110 61.8
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.8e-35 152.9 121 55.4
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.8e-35 152.9 121 55.4
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.3e-35 152.5 119 58.8
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 3.0e-35 152.1 115 61.7
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.2e-35 151.4 130 58.5
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 2.0e-34 149.4 129 57.4
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 3.4e-34 148.7 129 57.4
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.2e-33 146.0 131 57.3
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.2e-33 146.0 129 56.6
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.2e-33 146.0 129 56.6
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 3.7e-33 145.2 139 54.0
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.7e-31 139.0 123 56.9
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 1.1e-29 133.7 137 49.6
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 4.2e-29 131.7 113 57.5
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 1.2e-23 113.6 126 46.8
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 3.5e-23 112.1 104 52.9
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.3e-22 109.4 120 40.8
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 2.9e-22 109.0 135 43.7
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.1e-21 107.1 137 41.6
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.1e-21 107.1 122 45.1
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 2.5e-21 105.9 138 39.9
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.3e-21 105.5 122 43.4
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 9.5e-21 104.0 115 48.7
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.2e-20 103.6 128 41.4
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.6e-20 103.2 109 45.9
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.1e-20 102.8 129 39.5
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.1e-20 102.8 132 38.6
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.1e-20 101.3 116 44.8
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.1e-20 101.3 128 42.2
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.8e-19 97.8 109 45.0
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.4e-18 95.1 139 38.8
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.4e-18 95.1 125 43.2
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.8e-18 94.7 102 48.0
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.8e-18 94.7 113 41.6
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 7.5e-18 94.4 129 38.8
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.4e-17 91.3 130 39.2
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 8.3e-17 90.9 125 39.2
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.1e-16 90.5 129 39.5
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.4e-16 90.1 113 38.1
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.4e-16 88.2 75 57.3
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 1.2e-15 87.0 116 44.8
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 1.6e-15 86.7 57 70.2
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.0e-15 86.3 130 38.5
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.5e-15 85.5 111 40.5
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.6e-15 85.1 111 42.3
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.6e-14 81.3 85 47.1
AagrBONN_evm.TU.Sc2ySwM_344.1663 Anthoceros agrestis HOM05D006839 ORTHO05D007872 1.5e-13 80.1 116 40.5
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-13 80.1 82 48.8
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.3e-13 78.6 111 36.0
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 4.3e-13 78.6 113 38.9
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 6.2e-12 74.7 125 35.2
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 1.4e-11 73.6 115 33.0
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 1.4e-11 73.6 115 33.0
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 6.8e-11 71.2 140 33.6
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 2.0e-10 69.7 121 35.5
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.8e-10 67.4 115 38.3
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.3e-09 67.0 107 33.6
AagrBONN_evm.TU.Sc2ySwM_344.1662 Anthoceros agrestis HOM05D032874 ORTHO05D007872 1.9e-08 63.2 107 33.6
PGR031G3557 Punica granatum HOM05D023640 ORTHO05D019592 7.1e-08 61.2 122 32.8
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 7.1e-08 61.2 137 30.7
AagrBONN_evm.TU.Sc2ySwM_368.904 Anthoceros agrestis HOM05D032606 ORTHO05D007872 3.5e-07 58.9 114 32.5
Prupe.4G027300 Prunus persica HOM05D000022 ORTHO05D000071 6.0e-07 58.2 52 46.2
Thhalv10019845m.g Eutrema salsugineum HOM05D000655 ORTHO05D001166 7.8e-07 57.8 132 27.3
Manes.12G052300 Manihot esculenta HOM05D000022 ORTHO05D000306 1.3e-06 57.0 108 32.4
SEGI_22649 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 1.3e-06 57.0 99 32.3
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 1.7e-06 56.6 116 34.5
SEGI_36721 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.7e-06 56.6 97 30.9
Zm00001eb291380 Zea mays HOM05D000022 ORTHO05D000071 1.7e-06 56.6 85 36.5
SEGI_08922 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 3.9e-06 55.5 111 28.8
TPR.G5552 Trifolium pratense HOM05D000022 ORTHO05D000071 3.9e-06 55.5 109 29.4
SEGI_00781 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 5.1e-06 55.1 99 30.3
TPR.G10812 Trifolium pratense HOM05D000022 ORTHO05D000306 5.1e-06 55.1 93 35.5
Lj5g0003096 Lotus japonicus HOM05D000022 ORTHO05D000071 6.6e-06 54.7 121 35.5
Cc11_g14780 Coffea canephora HOM05D000022 ORTHO05D000071 8.6e-06 54.3 93 30.1
MBI06_g44536_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D002153 8.6e-06 54.3 124 29.8
MBI06_g46600_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D002153 8.6e-06 54.3 124 29.8
SEGI_30790 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 8.6e-06 54.3 99 33.3


User provided reference genes

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