Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_08922 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.6e-120 436.0 214 100.0
Duzib106G1172 Durio zibethinus HOM05D000664 ORTHO05D000491 2.9e-53 212.6 400 34.2
Thecc.05G282300 Theobroma cacao HOM05D000664 ORTHO05D000491 7.3e-36 154.8 120 65.8
Thecc.05G282400 Theobroma cacao HOM05D000664 ORTHO05D000491 2.6e-33 146.4 360 30.0
Thecc.05G238500 Theobroma cacao HOM05D000664 ORTHO05D000491 1.0e-21 107.8 119 49.6
Thecc.05G238300 Theobroma cacao HOM05D000664 ORTHO05D000491 8.6e-21 104.8 119 47.1
Thecc.05G238400 Theobroma cacao HOM05D000664 ORTHO05D000491 8.6e-21 104.8 119 47.1
Gohir.D13G165600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.2e-19 100.9 109 50.5
Duzib128G1119 Durio zibethinus HOM05D000664 ORTHO05D000491 3.6e-19 99.4 104 51.0
Duzib106G1902 Durio zibethinus HOM05D000664 ORTHO05D000491 1.1e-18 97.8 104 50.0
Gorai.013G197000 Gossypium raimondii HOM05D000664 ORTHO05D000491 2.3e-18 96.7 115 47.8
Gohir.A13G160400 Gossypium hirsutum HOM05D000664 ORTHO05D000491 4.0e-18 95.9 120 45.8
COL.COLO4_36189 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.2e-18 95.5 105 50.5
Duzib106G1358 Durio zibethinus HOM05D000664 ORTHO05D000491 1.2e-17 94.4 103 47.6
Gohir.A11G224210 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.2e-17 94.4 112 47.3
COL.COLO4_08939 Corchorus olitorius HOM05D000664 ORTHO05D000491 9.9e-17 91.3 119 47.9
COL.COLO4_31801 Corchorus olitorius HOM05D000664 ORTHO05D000491 9.9e-17 91.3 110 46.4
COL.COLO4_09300 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.7e-16 90.5 104 49.0
Gohir.D11G237600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.7e-16 90.5 110 48.2
Gorai.007G251000 Gossypium raimondii HOM05D000664 ORTHO05D000491 1.7e-16 90.5 110 48.2
Thecc.05G238200 Theobroma cacao HOM05D000664 ORTHO05D000491 3.8e-16 89.4 105 46.7
Gohir.D13G101806 Gossypium hirsutum HOM05D000664 ORTHO05D000491 6.4e-16 88.6 105 44.8
Gorai.013G114100 Gossypium raimondii HOM05D000664 ORTHO05D000491 6.4e-16 88.6 105 44.8
Duzib177G0294 Durio zibethinus HOM05D000664 ORTHO05D000491 1.1e-15 87.8 108 44.4
Duzib177G1102 Durio zibethinus HOM05D000664 ORTHO05D000491 1.4e-15 87.4 152 34.9
COL.COLO4_38550 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.4e-15 86.7 109 44.0
Duzib106G0932 Durio zibethinus HOM05D000664 ORTHO05D000491 3.2e-15 86.3 108 46.3
Gohir.A13G096800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 4.1e-15 85.9 105 43.8
Duzib177G1036 Durio zibethinus HOM05D000664 ORTHO05D000491 3.5e-14 82.8 144 35.4
Duzib106G2017 Durio zibethinus HOM05D000664 ORTHO05D000491 7.8e-14 81.6 129 35.7
Duzib128G1279 Durio zibethinus HOM05D000664 ORTHO05D000491 1.0e-13 81.3 107 43.9
Gohir.A13G160450 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.0e-13 81.3 96 44.8
Duzib177G0141 Durio zibethinus HOM05D000664 ORTHO05D000491 3.9e-13 79.3 103 42.7
COL.COLO4_08936 Corchorus olitorius HOM05D000664 ORTHO05D000491 6.6e-13 78.6 103 45.6
Thecc.05G237900 Theobroma cacao HOM05D000664 ORTHO05D000491 8.6e-13 78.2 106 44.3
COL.COLO4_38551 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.9e-12 77.0 129 35.7
Duzib106G0771 Durio zibethinus HOM05D000664 ORTHO05D000491 5.6e-12 75.5 110 38.2
Thecc.05G238100 Theobroma cacao HOM05D000664 ORTHO05D000491 9.6e-12 74.7 106 40.6
Duzib177G1156 Durio zibethinus HOM05D000664 ORTHO05D000491 1.2e-11 74.3 96 42.7
COL.COLO4_13626 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.6e-11 73.9 126 37.3
COL.COLO4_32999 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.8e-11 73.2 115 43.5
COL.COLO4_32998 Corchorus olitorius HOM05D000664 ORTHO05D000491 4.7e-11 72.4 138 36.2
Manes.01G166900 Manihot esculenta HOM05D000664 ORTHO05D000491 4.7e-11 72.4 113 40.7
RcHm_v2.0_Chr4g0398001 Rosa chinensis HOM05D000664 ORTHO05D000491 2.4e-10 70.1 109 39.4
Sabra05G0040400 Salix brachista HOM05D000664 ORTHO05D000491 2.4e-10 70.1 116 41.4
Thecc.05G261800 Theobroma cacao HOM05D000052 ORTHO05D000491 2.4e-10 70.1 63 44.4
COL.COLO4_32997 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.1e-10 69.7 108 43.5
MD16G1239800 Malus domestica HOM05D000664 ORTHO05D000491 6.9e-10 68.6 210 29.5
FvH4_4g06280 Fragaria vesca HOM05D000664 ORTHO05D000491 2.0e-09 67.0 140 34.3
FAN12G1398 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.0e-09 67.0 140 34.3
GSVIVG01017506001 Vitis vinifera HOM05D000664 ORTHO05D000491 2.0e-09 67.0 146 34.2
FAN07G2357 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.6e-09 66.6 140 34.3
FAN22G0437 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.8e-09 65.5 108 39.8
FAN17G1155 Fragaria x ananassa HOM05D000664 ORTHO05D000491 7.6e-09 65.1 140 33.6
Rhsim01G0013400 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.9e-08 63.2 122 36.1
Sabra18G0112500 Salix brachista HOM05D000664 ORTHO05D000491 2.9e-08 63.2 153 31.4
COL.COLO4_32988 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.8e-08 62.8 84 45.2
Potri.018G132800 Populus trichocarpa HOM05D000664 ORTHO05D000491 3.8e-08 62.8 107 36.4
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.9e-08 62.4 103 41.7
Rhsim01G0005800 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.4e-08 62.0 105 41.0
Potri.005G043500 Populus trichocarpa HOM05D000664 ORTHO05D000491 1.1e-07 61.2 122 37.7
GSVIVG01010911001 Vitis vinifera HOM05D000664 ORTHO05D000491 1.4e-07 60.8 109 36.7
Potri.003G215900 Populus trichocarpa HOM05D000664 ORTHO05D000491 1.9e-07 60.5 95 36.8
Sabra03G0161100 Salix brachista HOM05D000664 ORTHO05D001733 1.9e-07 60.5 95 37.9
Lj2P385T13 Lonicera japonica HOM05D000664 ORTHO05D000491 2.4e-07 60.1 112 33.0
Dinv26464 Davidia involucrata HOM05D000664 ORTHO05D000491 3.2e-07 59.7 125 38.4
Potri.013G067800 Populus trichocarpa HOM05D000664 ORTHO05D000491 3.2e-07 59.7 112 38.4
AUR62031522 Chenopodium quinoa HOM05D000664 ORTHO05D000491 4.2e-07 59.3 124 33.1
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.2e-07 59.3 99 41.4
CiPaw.15G154900 Carya illinoinensis HOM05D000664 ORTHO05D000491 5.4e-07 58.9 121 37.2
COL.COLO4_31760 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.4e-07 58.9 95 36.8
FvH4_2g35950 Fragaria vesca HOM05D000664 ORTHO05D000491 5.4e-07 58.9 79 41.8
CSS0004085 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 9.3e-07 58.2 128 34.4
CSS0016323 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.2e-06 57.8 128 34.4
FAN27G0857 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.2e-06 57.8 77 41.6
Potri.013G065500 Populus trichocarpa HOM05D000664 ORTHO05D000491 1.2e-06 57.8 146 31.5
PGR044G0383 Punica granatum HOM05D000664 ORTHO05D000491 1.2e-06 57.8 119 31.9
SGA_v2.0_scaffold136G35012 Striga asiatica HOM05D000664 ORTHO05D000491 1.2e-06 57.8 107 35.5
AUR62004782 Chenopodium quinoa HOM05D000664 ORTHO05D000491 1.6e-06 57.4 112 38.4
Lj8C33T15 Lonicera japonica HOM05D000664 ORTHO05D000491 1.6e-06 57.4 137 32.1
MSTRG.27218 Avicennia marina HOM05D000664 ORTHO05D000491 2.1e-06 57.0 110 39.1
FAN05G0730 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.1e-06 57.0 144 29.9
Potri.006G071100 Populus trichocarpa HOM05D000664 ORTHO05D000491 2.1e-06 57.0 123 34.1
DCAR_005812 Daucus carota HOM05D000664 ORTHO05D000491 2.7e-06 56.6 115 35.7
Duzib128G1574 Durio zibethinus HOM05D000664 ORTHO05D000491 2.7e-06 56.6 66 42.4
Rhsim11G0068300 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.7e-06 56.6 159 30.2
FAN07G2069 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.5e-06 56.2 149 30.9
Gohir.A12G196800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 3.5e-06 56.2 100 36.0
Gohir.D12G199300 Gossypium hirsutum HOM05D000664 ORTHO05D000491 3.5e-06 56.2 103 37.9
Gorai.008G214500 Gossypium raimondii HOM05D000664 ORTHO05D000491 3.5e-06 56.2 103 37.9
Hma1.2p1_0726F.1_g208920 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 3.5e-06 56.2 116 35.3
FvH4_2g35920 Fragaria vesca HOM05D000664 ORTHO05D000491 4.6e-06 55.8 80 41.2
HanXRQChr03g0067811 Helianthus annuus HOM05D000664 ORTHO05D000491 4.6e-06 55.8 100 37.0
Rhsim01G0013600 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.6e-06 55.8 138 31.9
SGA_v2.0_scaffold136G35021 Striga asiatica HOM05D000664 ORTHO05D000491 4.6e-06 55.8 107 40.2
CAN.G407.34 Capsicum annuum HOM05D000664 ORTHO05D000491 6.0e-06 55.5 108 36.1
Cc02_g04650 Coffea canephora HOM05D000664 ORTHO05D000491 6.0e-06 55.5 120 32.5
Sc09g0004440 Simmondsia chinensis HOM05D000664 ORTHO05D000491 6.0e-06 55.5 110 36.4
Thecc.07G025800 Theobroma cacao HOM05D000664 ORTHO05D000491 6.0e-06 55.5 97 40.2
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 6.0e-06 55.5 108 40.7
Rhsim01G0013500 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.8e-06 55.1 126 32.5
RcHm_v2.0_Chr5g0059531 Rosa chinensis HOM05D000664 ORTHO05D000491 7.8e-06 55.1 106 41.5


User provided reference genes

Program Settings