Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_08788 Corchorus olitorius HOM05D013576 ORTHO05D000880 3.6e-176 621.7 362 100.0
COL.COLO4_09303 Corchorus olitorius HOM05D013576 ORTHO05D162562 7.1e-100 368.2 228 89.9
COL.COLO4_26849 Corchorus olitorius HOM05D013576 ORTHO05D154794 5.1e-98 362.1 231 89.2
COL.COLO4_33960 Corchorus olitorius HOM05D013576 ORTHO05D159196 8.7e-90 334.7 215 88.4
COL.COLO4_36842 Corchorus olitorius HOM05D013576 ORTHO05D162219 7.4e-81 305.1 165 95.8
COL.COLO4_38077 Corchorus olitorius HOM05D013576 ORTHO05D161538 1.4e-76 290.8 284 59.2
COL.COLO4_16783 Corchorus olitorius HOM05D013576 ORTHO05D155199 1.2e-54 218.0 266 53.4
COL.COLO4_08553 Corchorus olitorius HOM05D013576 ORTHO05D156930 2.1e-43 180.6 154 63.0
COL.COLO4_35958 Corchorus olitorius HOM05D013576 ORTHO05D159928 1.8e-31 141.0 150 58.7
COL.COLO4_07963 Corchorus olitorius HOM05D013576 ORTHO05D160898 3.1e-23 113.6 107 59.8
COL.COLO4_06515 Corchorus olitorius HOM05D013576 ORTHO05D162142 5.9e-14 82.8 79 63.3
MBI16_g25487_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.1e-11 72.8 96 40.6
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-10 71.6 104 37.5
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 1.8e-10 71.2 104 37.5
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 2.3e-10 70.9 97 38.1
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 2.3e-10 70.9 104 37.5
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 2.3e-10 70.9 104 37.5
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 3.0e-10 70.5 102 38.2
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 5.2e-10 69.7 79 44.3
PSO017G0308 Papaver somniferum HOM05D000429 ORTHO05D000352 1.2e-09 68.6 96 34.4
MBI07_g36530_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.4e-09 67.0 90 43.3
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 4.4e-09 66.6 83 42.2
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 4.4e-09 66.6 92 41.3
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 7.5e-09 65.9 89 40.4
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 7.5e-09 65.9 102 37.3
MBI17_g25611_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 7.5e-09 65.9 84 42.9
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 9.8e-09 65.5 90 36.7
CANSAT80G0247 Cannabis sativa HOM05D012483 ORTHO05D000352 9.8e-09 65.5 91 36.3
COL.COLO4_25053 Corchorus olitorius HOM05D013576 ORTHO05D158542 1.3e-08 65.1 64 59.4
ECA232G1382 Erigeron canadensis HOM05D000429 ORTHO05D000880 1.7e-08 64.7 90 41.1
MBI01_g07127_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.7e-08 64.7 96 37.5
MBI05_g32032_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.7e-08 64.7 84 42.9
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 2.2e-08 64.3 93 37.6
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 2.2e-08 64.3 89 38.2
Rhsim05G0128200 Rhododendron simsii HOM05D001436 ORTHO05D000880 2.2e-08 64.3 92 34.8
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 3.7e-08 63.5 83 41.0
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 3.7e-08 63.5 100 37.0
SGA_v2.0_scaffold245G44675 Striga asiatica HOM05D000429 ORTHO05D002449 3.7e-08 63.5 105 38.1
Ah.04g156040 Amaranthus hybridus HOM05D009849 ORTHO05D000880 4.9e-08 63.2 95 40.0
CSS0049794 Camellia sinensis var. sinensis HOM05D013752 ORTHO05D000352 4.9e-08 63.2 93 33.3
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 6.4e-08 62.8 83 41.0
CSS0019617 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 6.4e-08 62.8 84 39.3
CSS0038364 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 6.4e-08 62.8 84 39.3
PSO339G2401 Papaver somniferum HOM05D000429 ORTHO05D000352 6.4e-08 62.8 96 32.3
TPR.G34595 Trifolium pratense HOM05D000429 ORTHO05D000880 6.4e-08 62.8 108 35.2
MBI01_g48011_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 8.3e-08 62.4 90 40.0
MBI07_g32587_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.4e-07 61.6 72 44.4
PSO591G0437 Papaver somniferum HOM05D000429 ORTHO05D002449 1.4e-07 61.6 91 33.0
CSS0001426 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D001509 2.4e-07 60.8 89 37.1
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 2.4e-07 60.8 102 36.3
MBI14_g08687_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.1e-07 60.1 96 36.5
MBI15_g16379_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.1e-07 60.1 96 37.5
Manes.14G158232 Manihot esculenta HOM05D000429 ORTHO05D000880 4.1e-07 60.1 91 37.4
Oeu014351.1 Olea europaea HOM05D000047 ORTHO05D000044 4.1e-07 60.1 93 37.6
Oeu057826.1 Olea europaea HOM05D000047 ORTHO05D000044 4.1e-07 60.1 92 39.1
FvH4_3g17101 Fragaria vesca HOM05D000429 ORTHO05D000352 5.4e-07 59.7 89 40.4
QL10p000322 Quercus lobata HOM05D000429 ORTHO05D002449 5.4e-07 59.7 67 43.3
AUR62034883 Chenopodium quinoa HOM05D009849 ORTHO05D012324 7.0e-07 59.3 90 40.0
CANSAT35G1177 Cannabis sativa HOM05D012483 ORTHO05D000352 9.2e-07 58.9 83 34.9
PSO198G0005 Papaver somniferum HOM05D000429 ORTHO05D002449 9.2e-07 58.9 96 31.2
PSO339G0295 Papaver somniferum HOM05D000429 ORTHO05D002449 9.2e-07 58.9 119 30.3
CSS0038357 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.2e-06 58.5 102 33.3
PSO017G6977 Papaver somniferum HOM05D000429 ORTHO05D002449 1.2e-06 58.5 96 32.3
PSO541G2128 Papaver somniferum HOM05D000429 ORTHO05D002449 1.2e-06 58.5 96 30.2
PSO675G8090 Papaver somniferum HOM05D000429 ORTHO05D002449 1.2e-06 58.5 91 33.0
CSS0016049 Camellia sinensis var. sinensis HOM05D009643 ORTHO05D010737 1.6e-06 58.2 84 36.9
CSS0035142 Camellia sinensis var. sinensis HOM05D009600 ORTHO05D011803 1.6e-06 58.2 83 33.7
CSS0036740 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.6e-06 58.2 106 28.3
MBI01_g37950_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.6e-06 58.2 84 39.3
TWI31G0666 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 58.2 106 34.9
TWI31G0704 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 58.2 106 34.9
TWI73G1087 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 58.2 106 34.9
TWI81G0273 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 58.2 106 34.9
CSS0006586 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.0e-06 57.8 106 28.3
CSS0033267 Camellia sinensis var. sinensis HOM05D009643 ORTHO05D010737 2.0e-06 57.8 84 35.7
Lj6P789T46 Lonicera japonica HOM05D001436 ORTHO05D000880 2.0e-06 57.8 78 35.9
Lj5g0013972 Lotus japonicus HOM05D000429 ORTHO05D002578 2.0e-06 57.8 89 37.1
PSO170G5530 Papaver somniferum HOM05D000429 ORTHO05D002449 2.0e-06 57.8 96 31.2
PSO675G1134 Papaver somniferum HOM05D009926 ORTHO05D002449 2.0e-06 57.8 103 33.0
arahy.Tifrunner.gnm1.ann1.W6UN1E Arachis hypogaea HOM05D003069 ORTHO05D000880 2.7e-06 57.4 90 34.4
CSS0007462 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 2.7e-06 57.4 90 30.0
CSS0016793 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 2.7e-06 57.4 90 30.0
PSO063G4613 Papaver somniferum HOM05D000429 ORTHO05D002449 2.7e-06 57.4 96 31.2
PSO541G3456 Papaver somniferum HOM05D009926 ORTHO05D002449 2.7e-06 57.4 113 34.5
CANSAT64G1284 Cannabis sativa HOM05D009938 ORTHO05D000880 3.5e-06 57.0 69 42.0
PSO210G3944 Papaver somniferum HOM05D009926 ORTHO05D002449 3.5e-06 57.0 68 42.6
PSO675G4929 Papaver somniferum HOM05D000429 ORTHO05D002449 3.5e-06 57.0 96 32.3
TWI39G1023 Tripterygium wilfordii HOM05D000429 ORTHO05D008058 3.5e-06 57.0 101 35.6
Oeu012288.1 Olea europaea HOM05D005901 ORTHO05D000880 4.6e-06 56.6 73 43.8
PSO384G1833 Papaver somniferum HOM05D000429 ORTHO05D002449 4.6e-06 56.6 96 32.3
PSO832G0169 Papaver somniferum HOM05D000429 ORTHO05D002449 4.6e-06 56.6 119 32.8
TPR.G30696 Trifolium pratense HOM05D000429 ORTHO05D000880 4.6e-06 56.6 61 45.9
arahy.Tifrunner.gnm1.ann1.6D2RJL Arachis hypogaea HOM05D000429 ORTHO05D000880 6.0e-06 56.2 89 38.2
CSS0009224 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 6.0e-06 56.2 84 35.7
CSS0022352 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.0e-06 56.2 90 30.0
CSS0031980 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.0e-06 56.2 106 27.4
CSS0047560 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.0e-06 56.2 106 27.4
FvH4_3g32051 Fragaria vesca HOM05D000429 ORTHO05D002449 6.0e-06 56.2 68 35.3
Oeu053585.1 Olea europaea HOM05D001436 ORTHO05D000880 6.0e-06 56.2 73 42.5
PSO384G3956 Papaver somniferum HOM05D000429 ORTHO05D000352 6.0e-06 56.2 91 33.0
PSO832G0268 Papaver somniferum HOM05D009926 ORTHO05D002449 6.0e-06 56.2 103 33.0
arahy.Tifrunner.gnm1.ann1.6EH8Q5 Arachis hypogaea HOM05D000429 ORTHO05D000880 7.8e-06 55.8 83 36.1
EL10Ac4g09042 Beta vulgaris HOM05D000107 ORTHO05D000062 7.8e-06 55.8 89 39.3
CSS0018970 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 7.8e-06 55.8 106 28.3
Lj3g0010754 Lotus japonicus HOM05D000429 ORTHO05D000880 7.8e-06 55.8 67 40.3
PSO675G2526 Papaver somniferum HOM05D000429 ORTHO05D002449 7.8e-06 55.8 96 30.2


User provided reference genes

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