Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 4.0e-142 508.1 250 100.0
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 1.3e-92 343.6 349 57.9
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 2.4e-83 312.8 350 53.1
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.3e-81 307.0 347 52.7
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.1e-80 303.9 347 52.4
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.6e-79 300.1 345 52.2
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.6e-79 300.1 345 52.2
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 2.1e-63 246.5 277 49.5
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 3.7e-63 245.7 300 49.7
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 6.9e-62 241.5 302 47.4
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 2.6e-61 239.6 286 47.6
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 4.5e-61 238.8 286 47.2
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 1.0e-60 237.7 287 47.4
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.7e-60 236.9 277 47.7
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 1.1e-59 234.2 182 64.3
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 1.4e-59 233.8 359 43.2
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 3.2e-59 232.6 348 44.0
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 5.5e-59 231.9 286 47.6
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 1.2e-58 230.7 340 43.5
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 1.6e-58 230.3 351 42.7
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 4.6e-58 228.8 283 46.3
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 4.6e-58 228.8 184 61.4
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 4.6e-58 228.8 352 43.2
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 7.9e-58 228.0 279 48.4
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.0e-57 227.6 348 44.3
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.8e-57 226.9 182 61.0
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 5.1e-57 225.3 350 43.4
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 8.7e-57 224.6 342 41.5
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 8.7e-57 224.6 339 41.6
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.5e-56 223.8 281 44.8
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 2.5e-56 223.0 182 60.4
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 3.3e-56 222.6 338 40.2
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 3.3e-56 222.6 182 61.5
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 7.4e-56 221.5 182 61.5
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 1.3e-55 220.7 282 46.1
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.6e-55 220.3 182 61.0
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 2.8e-55 219.5 341 41.3
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 6.3e-55 218.4 298 42.6
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 8.2e-55 218.0 180 60.0
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 8.2e-55 218.0 181 60.2
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 2.4e-54 216.5 184 58.2
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 4.1e-54 215.7 336 41.4
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 4.1e-54 215.7 336 40.2
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 5.3e-54 215.3 280 45.0
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 1.2e-53 214.2 288 43.8
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.5e-53 213.8 182 58.8
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 2.6e-53 213.0 180 58.3
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 3.4e-53 212.6 279 43.7
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 3.4e-53 212.6 307 43.0
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 3.4e-53 212.6 182 57.1
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 4.5e-53 212.2 182 58.2
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 7.6e-53 211.5 182 58.2
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 7.6e-53 211.5 184 57.1
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 1.0e-52 211.1 284 44.4
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.0e-52 211.1 184 57.1
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 1.0e-52 211.1 304 42.1
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 1.7e-52 210.3 334 40.4
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.7e-52 210.3 182 59.9
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 2.2e-52 209.9 331 40.8
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 2.9e-52 209.5 188 55.9
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 6.5e-52 208.4 195 57.4
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 8.5e-52 208.0 121 80.2
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 1.1e-51 207.6 140 72.1
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.9e-51 206.8 182 56.6
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 1.9e-51 206.8 182 56.6
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 1.9e-51 206.8 181 57.5
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 4.2e-51 205.7 182 57.7
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 4.2e-51 205.7 184 55.4
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 5.5e-51 205.3 182 55.5
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 2.7e-50 203.0 181 56.4
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 2.7e-50 203.0 181 56.4
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 2.7e-50 203.0 181 56.4
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 2.7e-50 203.0 182 56.0
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.7e-50 203.0 180 57.8
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.6e-50 202.6 180 57.2
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 3.6e-50 202.6 182 58.2
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 4.6e-50 202.2 180 60.0
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 7.9e-50 201.4 182 56.6
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 7.9e-50 201.4 275 42.9
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.3e-49 200.7 178 57.9
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 2.3e-49 199.9 269 44.2
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 3.0e-49 199.5 180 57.2
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 5.1e-49 198.7 182 56.0
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 2.5e-48 196.4 181 54.1
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 5.7e-48 195.3 183 54.6
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 9.7e-48 194.5 344 38.4
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 1.3e-47 194.1 178 55.1
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 1.6e-47 193.7 140 65.0
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 6.3e-47 191.8 138 66.7
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 2.0e-45 186.8 116 75.0
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 1.3e-44 184.1 182 50.5
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 1.3e-44 184.1 168 53.0
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 2.5e-43 179.9 188 49.5
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 2.7e-42 176.4 208 48.6
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 1.5e-40 170.6 182 51.1
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 6.9e-38 161.8 185 48.6
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 6.9e-38 161.8 185 48.6
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 1.6e-34 150.6 176 50.0
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.7e-34 149.8 282 37.9
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.7e-34 149.8 282 37.9
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 3.0e-33 146.4 188 46.3
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.4e-30 137.5 182 46.2
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 5.3e-30 135.6 133 55.6
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.6e-29 134.0 133 54.9
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.2e-27 125.9 120 60.0
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 9.4e-27 124.8 124 52.4
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 8.0e-26 121.7 178 41.0
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.0e-25 119.4 182 38.5
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 9.1e-22 108.2 71 70.4
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 4.0e-17 92.8 145 39.3
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 7.5e-08 62.0 77 45.5


User provided reference genes

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