Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.1e-243 846.3 434 100.0
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 7.7e-186 654.1 459 77.1
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.4e-163 579.3 457 70.2
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 4.3e-152 542.0 450 62.4
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 4.3e-152 542.0 450 62.4
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 5.8e-149 531.6 464 61.4
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.8e-148 528.9 408 65.9
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 6.4e-148 528.1 438 62.6
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 3.2e-147 525.8 401 66.6
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 9.2e-147 524.2 463 60.9
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 9.2e-147 524.2 456 62.5
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.0e-145 520.8 457 61.5
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.3e-145 519.6 413 64.6
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 7.3e-144 514.6 427 62.8
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.3e-143 513.8 443 61.2
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.8e-143 511.9 452 60.2
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.8e-142 510.0 452 60.2
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.8e-142 510.0 407 63.6
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 9.0e-142 507.7 429 61.5
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 4.4e-141 505.4 410 62.7
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 9.9e-141 504.2 449 59.9
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 4.9e-140 501.9 408 64.5
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 8.4e-140 501.1 409 62.8
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.4e-139 500.4 455 60.0
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.5e-138 495.7 402 62.7
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.0e-137 494.2 438 61.0
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.7e-137 493.4 401 63.3
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 3.3e-136 489.2 399 63.2
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 4.3e-136 488.8 455 59.1
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 5.6e-136 488.4 405 62.7
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 9.6e-136 487.6 451 59.0
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 8.1e-135 484.6 407 61.9
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.1e-134 484.2 443 58.9
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 6.9e-134 481.5 453 57.2
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 6.9e-134 481.5 427 60.2
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 9.0e-134 481.1 428 58.6
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 9.0e-134 481.1 421 59.4
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.2e-133 480.7 441 59.4
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 4.5e-133 478.8 463 56.4
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.7e-132 476.9 409 60.6
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.7e-132 476.9 439 56.9
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 2.2e-132 476.5 401 63.3
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 6.4e-132 474.9 401 61.1
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.9e-131 473.4 406 59.9
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 4.2e-131 472.2 455 57.1
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.2e-131 472.2 452 57.1
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 9.3e-131 471.1 428 57.5
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.7e-130 469.5 447 57.7
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 4.6e-130 468.8 402 60.2
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 7.9e-130 468.0 447 57.5
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 3.0e-129 466.1 457 56.5
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 3.9e-129 465.7 427 56.4
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 8.7e-129 464.5 445 56.4
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.9e-128 463.4 445 56.2
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 1.9e-128 463.4 404 60.1
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.9e-128 463.4 458 56.3
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 2.5e-128 463.0 450 56.9
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 3.3e-128 462.6 454 55.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.3e-128 462.6 461 54.2
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 4.3e-128 462.2 454 55.9
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 4.3e-128 462.2 384 62.0
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 9.6e-128 461.1 450 55.1
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 1.6e-127 460.3 451 55.0
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 3.7e-127 459.1 456 55.3
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 6.2e-127 458.4 435 55.4
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.4e-126 457.2 448 54.5
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 4.0e-126 455.7 490 52.9
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 4.0e-126 455.7 471 54.4
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.5e-125 453.8 450 55.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 2.6e-125 453.0 295 77.6
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 2.9e-124 449.5 380 62.4
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 4.2e-123 445.7 455 53.4
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 4.2e-123 445.7 374 61.0
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 7.9e-122 441.4 433 55.0
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 3.9e-121 439.1 447 53.2
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 4.3e-120 435.6 458 51.3
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 2.8e-119 433.0 342 64.3
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.4e-118 429.9 315 74.6
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 4.0e-118 429.1 315 74.9
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 1.5e-117 427.2 375 57.9
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 3.4e-117 426.0 411 56.2
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 5.5e-115 418.7 331 64.4
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 1.2e-114 417.5 434 53.0
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 3.2e-107 392.9 414 52.9
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.0e-104 383.6 415 51.3
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 2.8e-103 379.8 333 58.6
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 6.3e-103 378.6 329 60.2
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 6.9e-102 375.2 331 60.1
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 1.3e-100 370.9 398 49.7
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.9e-99 367.1 358 53.4
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 6.7e-97 358.6 379 50.7
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 8.2e-95 351.7 292 62.7
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 5.9e-93 345.5 273 65.2
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.7e-92 344.0 379 50.9
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 2.6e-88 330.1 402 46.3
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 2.2e-87 327.0 410 44.4
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.3e-86 322.4 295 56.6
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 2.6e-85 320.1 387 47.8
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 5.5e-83 312.4 406 43.3
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 1.2e-80 304.7 271 58.7
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 8.0e-74 282.0 314 49.4
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 3.7e-71 273.1 397 39.0
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.6e-50 203.4 248 46.4
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.2e-47 194.1 138 69.6
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 2.9e-47 193.7 163 60.1
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 6.6e-44 182.6 147 64.6
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.6e-34 150.2 137 54.0
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 9.9e-32 142.1 137 51.1
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.4e-30 138.3 165 48.5
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.4e-30 137.5 103 67.0
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.0e-28 132.1 96 66.7
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 1.9e-27 127.9 106 56.6
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.8e-26 124.0 123 57.7
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.4e-24 116.7 91 61.5
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.9e-19 101.3 117 50.4
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.6e-08 62.8 50 60.0


User provided reference genes

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