Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.9e-243 844.7 401 100.0
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 8.1e-206 720.3 405 84.7
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 9.9e-204 713.4 402 83.6
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 1.3e-200 703.0 405 81.5
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 7.6e-188 660.6 381 80.8
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 5.1e-184 647.9 404 75.2
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 5.3e-181 637.9 405 72.6
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 9.0e-181 637.1 401 74.3
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.2e-180 636.7 404 73.0
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 2.0e-180 636.0 399 73.2
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 3.4e-180 635.2 402 72.4
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 5.9e-180 634.4 404 72.3
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.3e-179 633.3 404 72.5
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.7e-179 632.9 403 71.2
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 6.5e-179 630.9 404 72.5
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.1e-178 630.2 408 71.8
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.2e-178 628.2 405 70.6
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 5.5e-178 627.9 404 71.8
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.2e-177 626.7 405 70.4
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-177 625.9 405 70.9
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.6e-177 625.2 405 70.6
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.6e-177 624.8 405 70.4
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.6e-177 624.8 405 70.1
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 4.6e-177 624.8 404 71.0
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.1e-177 624.4 405 70.4
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.1e-177 624.4 405 70.4
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.9e-177 624.0 405 70.4
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.9e-177 624.0 405 70.4
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.0e-176 623.6 405 70.1
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 3.0e-176 622.1 404 70.5
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.9e-176 621.7 405 70.1
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.7e-176 620.9 405 70.1
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.3e-175 618.6 403 70.2
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 3.3e-175 618.6 399 69.7
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 7.4e-175 617.5 403 71.0
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 2.2e-174 615.9 399 69.7
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 2.8e-174 615.5 400 69.8
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 3.7e-174 615.1 398 72.1
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 3.7e-174 615.1 404 71.0
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.8e-173 612.8 401 69.8
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 9.1e-173 610.5 402 70.4
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 1.5e-172 609.8 403 69.5
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 1.0e-171 607.1 405 68.4
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 1.7e-171 606.3 399 69.7
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 3.8e-171 605.1 404 69.8
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 5.0e-171 604.7 403 69.2
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 5.0e-171 604.7 399 70.7
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.4e-170 603.2 403 69.2
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 4.2e-170 601.7 399 70.4
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 4.2e-170 601.7 400 68.5
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 5.5e-170 601.3 398 68.8
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.6e-169 599.7 402 68.9
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 6.7e-168 594.3 402 68.4
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.0e-167 592.8 402 68.4
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 3.3e-167 592.0 357 75.6
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 3.3e-167 592.0 397 68.8
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 5.7e-167 591.3 401 69.3
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 9.7e-167 590.5 402 68.2
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 9.7e-167 590.5 402 68.2
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 9.7e-167 590.5 402 68.4
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.3e-166 590.1 395 69.1
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.7e-166 589.7 404 67.6
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 2.8e-166 589.0 404 67.8
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 2.8e-166 589.0 399 68.2
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 6.3e-166 587.8 401 67.3
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 5.9e-164 581.3 405 66.9
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 1.0e-163 580.5 406 67.7
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.0e-163 580.5 401 67.6
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.3e-163 580.1 402 67.4
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.3e-163 580.1 383 68.4
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.7e-163 579.7 402 67.7
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.7e-163 579.7 401 66.6
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.1e-162 577.0 401 67.6
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 1.9e-162 576.2 405 66.4
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 4.2e-162 575.1 404 67.3
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 2.1e-161 572.8 401 67.3
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 6.1e-161 571.2 369 71.0
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.0e-159 566.2 395 67.6
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 3.3e-159 565.5 401 66.3
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 9.7e-159 563.9 401 66.1
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 2.2e-158 562.8 357 70.6
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.2e-156 557.0 403 65.0
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 4.2e-154 548.5 401 65.3
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 7.2e-154 547.7 400 63.5
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 2.6e-151 539.3 358 70.1
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 4.4e-151 538.5 406 63.5
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 2.2e-150 536.2 351 69.5
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 7.0e-149 531.2 393 63.6
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 8.0e-145 517.7 408 62.0
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 4.0e-144 515.4 408 60.5
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 8.9e-136 487.6 402 59.7
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 6.8e-128 461.5 396 56.6
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.5e-127 460.3 291 72.9
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 3.2e-125 452.6 405 54.6
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 8.6e-123 444.5 356 60.7
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 9.9e-111 404.4 335 59.1
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 2.5e-106 389.8 400 49.2
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 1.7e-94 350.5 293 57.0
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.1e-88 331.3 209 72.2
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 3.4e-87 326.2 429 42.2
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.9e-78 296.6 433 39.3
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 6.3e-65 252.3 449 36.5
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.5e-63 247.7 301 44.2
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 3.6e-60 236.5 401 35.9
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 5.1e-59 232.6 160 64.4
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 7.7e-39 165.6 372 28.2
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 8.5e-38 162.2 129 56.6
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 5.5e-29 132.9 93 68.8
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 8.0e-28 129.0 292 31.5
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.5e-21 107.5 295 30.2
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.9e-17 94.0 70 65.7
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 6.2e-12 76.3 59 59.3
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 9.2e-08 62.4 80 42.5


User provided reference genes

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