Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07811 Corchorus olitorius HOM05D011604 ORTHO05D012513 2.4e-96 355.5 182 100.0
COL.COLO4_37937 Corchorus olitorius HOM05D011604 ORTHO05D012513 8.1e-20 101.3 105 52.4
COL.COLO4_09996 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.3e-17 94.0 100 49.0
TPR.G24473 Trifolium pratense HOM05D024240 ORTHO05D000385 6.4e-17 91.7 106 44.3
COL.COLO4_19845 Corchorus olitorius HOM05D011604 ORTHO05D012513 5.1e-14 82.0 99 44.4
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.7e-14 81.3 91 46.2
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-13 80.9 102 46.1
Lsat_1_v5_gn_4_141161 Lactuca sativa HOM05D001309 ORTHO05D000385 9.6e-13 77.8 97 42.3
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.6e-12 77.0 91 46.2
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 2.8e-12 76.3 100 43.0
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 2.8e-12 76.3 68 50.0
COL.COLO4_16333 Corchorus olitorius HOM05D011604 ORTHO05D012513 6.2e-12 75.1 99 39.4
Lsat_1_v5_gn_1_108060 Lactuca sativa HOM05D011604 ORTHO05D012513 1.1e-11 74.3 88 40.9
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-11 74.3 102 43.1
Lsat_1_v5_gn_7_21840 Lactuca sativa HOM05D008309 ORTHO05D012513 1.4e-11 73.9 93 41.9
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 2.4e-11 73.2 100 42.0
Ca_12196_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 3.1e-11 72.8 71 45.1
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.0e-11 72.4 103 37.9
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 9.0e-11 71.2 96 42.7
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.0e-11 71.2 96 42.7
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 9.0e-11 71.2 96 42.7
COL.COLO4_28315 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.2e-10 70.9 75 50.7
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.2e-10 70.9 102 37.3
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.5e-10 70.5 102 39.2
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.6e-10 69.7 96 42.7
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 4.5e-10 68.9 102 35.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.8e-10 68.6 102 36.3
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 7.6e-10 68.2 101 34.7
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 1.3e-09 67.4 103 38.8
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.7e-09 67.0 102 36.3
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 2.2e-09 66.6 109 36.7
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 2.9e-09 66.2 97 38.1
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 2.9e-09 66.2 103 33.0
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 3.8e-09 65.9 101 40.6
PGR015G0008 Punica granatum HOM05D011604 ORTHO05D012513 3.8e-09 65.9 85 42.4
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.8e-09 65.9 101 39.6
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.9e-09 65.5 101 39.6
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.9e-09 65.5 101 39.6
Lj9A299T34 Lonicera japonica HOM05D001309 ORTHO05D000385 6.4e-09 65.1 86 41.9
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.4e-09 65.1 101 39.6
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.1e-08 64.3 96 41.7
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.1e-08 64.3 97 41.2
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.4e-08 63.9 100 36.0
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.9e-08 63.5 100 38.0
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 2.4e-08 63.2 96 40.6
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 2.4e-08 63.2 96 40.6
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.4e-08 63.2 105 35.2
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.4e-08 63.2 97 36.1
ECA233G4902 Erigeron canadensis HOM05D011604 ORTHO05D012513 3.2e-08 62.8 81 40.7
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 3.2e-08 62.8 101 37.6
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 4.2e-08 62.4 104 35.6
HanXRQChr14g0443421 Helianthus annuus HOM05D011604 ORTHO05D012513 4.2e-08 62.4 103 36.9
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.2e-08 62.4 104 35.6
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 5.5e-08 62.0 96 41.7
TAR623G0274 Trochodendron aralioides HOM05D001309 ORTHO05D030706 5.5e-08 62.0 108 34.3
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.1e-08 61.6 99 33.3
Lsat_1_v5_gn_7_106561 Lactuca sativa HOM05D001309 ORTHO05D000385 9.3e-08 61.2 66 47.0
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 9.3e-08 61.2 94 43.6
COL.COLO4_07537 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.2e-07 60.8 41 70.7
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-07 60.8 99 37.4
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-07 60.8 93 39.8
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-07 60.8 101 38.6
RcHm_v2.0_Chr2g0136581 Rosa chinensis HOM05D008315 ORTHO05D009452 1.6e-07 60.5 102 34.3
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 2.1e-07 60.1 102 34.3
COL.COLO4_29995 Corchorus olitorius HOM05D011604 ORTHO05D012513 2.1e-07 60.1 71 46.5
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 2.1e-07 60.1 102 36.3
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-07 60.1 98 36.7
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-07 60.1 94 41.5
Lsat_1_v5_gn_7_106640 Lactuca sativa HOM05D011604 ORTHO05D012513 2.7e-07 59.7 71 43.7
Ca_14583_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.5e-07 59.3 100 33.0
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 4.6e-07 58.9 98 35.7
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-07 58.9 98 36.7
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.6e-07 58.9 98 32.7
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 7.9e-07 58.2 99 35.4
TAR633G1500 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.9e-07 58.2 101 30.7
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-06 57.0 99 38.4
Nitab4.5_0006915g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-06 57.0 96 37.5
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-06 56.6 95 33.7
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 3.0e-06 56.2 85 36.5
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-06 56.2 95 35.8
ECA240G1654 Erigeron canadensis HOM05D005763 ORTHO05D005970 3.9e-06 55.8 73 41.1
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 5.1e-06 55.5 94 36.2
TAR369G0592 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.7e-06 55.1 99 29.3


User provided reference genes

Program Settings