Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07810 Corchorus olitorius HOM05D004825 ORTHO05D005415 9.1e-126 453.8 258 100.0
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 1.1e-78 297.4 239 66.1
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 8.4e-71 271.2 226 64.2
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 3.0e-68 262.7 188 69.7
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 3.0e-68 262.7 188 69.7
Gohir.A09G053766 Gossypium hirsutum HOM05D004825 ORTHO05D005415 8.7e-68 261.2 188 69.1
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 5.1e-60 235.3 188 61.2
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 3.3e-59 232.6 189 61.4
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 3.3e-59 232.6 189 61.4
QL02p047766 Quercus lobata HOM05D004825 ORTHO05D005415 4.3e-59 232.3 188 61.7
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 1.6e-58 230.3 195 61.5
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 2.8e-58 229.6 189 60.8
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 8.1e-58 228.0 189 59.8
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 8.1e-58 228.0 189 57.7
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 1.1e-57 227.6 189 59.8
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.4e-57 227.3 189 59.8
Rhsim10G0138100 Rhododendron simsii HOM05D004825 ORTHO05D005415 1.8e-57 226.9 188 61.2
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 2.4e-57 226.5 187 59.9
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 2.4e-57 226.5 189 59.8
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 2.4e-57 226.5 189 59.8
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 4.0e-57 225.7 189 59.8
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 6.9e-57 224.9 190 60.0
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 9.0e-57 224.6 189 59.3
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 1.5e-56 223.8 189 58.7
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 2.6e-56 223.0 189 58.7
Oeu023621.1 Olea europaea HOM05D004825 ORTHO05D005415 5.8e-56 221.9 187 62.6
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 1.0e-55 221.1 193 56.5
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 1.0e-55 221.1 191 56.5
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 1.7e-55 220.3 228 51.8
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 2.2e-55 219.9 188 59.0
Nitab4.5_0004158g0040 Nicotiana tabacum HOM05D004825 ORTHO05D005415 2.2e-55 219.9 189 57.1
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 4.9e-55 218.8 187 58.8
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 8.4e-55 218.0 188 59.6
Nitab4.5_0000167g0020 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.4e-54 217.2 189 56.6
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 1.9e-54 216.9 183 59.6
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 1.9e-54 216.9 186 59.7
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 2.5e-54 216.5 187 59.4
vmacro12851 Vaccinium macrocarpon HOM05D004825 ORTHO05D005415 2.5e-54 216.5 188 58.5
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 7.9e-53 211.5 187 57.8
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 3.0e-52 209.5 189 54.0
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 3.9e-52 209.1 174 59.2
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 5.1e-52 208.8 189 57.7
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 1.9e-51 206.8 189 55.0
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 3.3e-51 206.1 189 54.5
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 4.3e-51 205.7 189 55.0
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 9.6e-51 204.5 184 56.0
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 1.6e-50 203.8 189 54.5
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 2.8e-50 203.0 188 58.0
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 3.7e-50 202.6 166 58.4
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 6.3e-50 201.8 184 57.1
Solyc11g018740.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 6.3e-50 201.8 189 52.9
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 5.3e-49 198.7 184 56.0
Sabra09G0094100 Salix brachista HOM05D004825 ORTHO05D005415 6.9e-49 198.4 166 59.6
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 6.9e-49 198.4 180 56.1
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 1.5e-48 197.2 184 54.9
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 2.6e-48 196.4 189 54.5
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 2.6e-48 196.4 183 55.2
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 4.5e-48 195.7 182 57.7
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 4.5e-48 195.7 188 56.4
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 5.9e-48 195.3 183 55.7
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 5.9e-48 195.3 166 60.2
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 1.3e-47 194.1 184 56.0
SalBow6G3714 Salvia bowleyana HOM05D004825 ORTHO05D005415 2.2e-47 193.4 181 55.2
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 6.5e-47 191.8 188 53.7
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 8.4e-47 191.4 184 54.3
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 1.1e-46 191.0 192 53.1
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 1.1e-46 191.0 183 53.6
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 1.9e-46 190.3 186 54.8
AL5G22510 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 3.2e-46 189.5 171 56.1
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 3.2e-46 189.5 171 56.1
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 3.2e-46 189.5 193 52.8
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 3.2e-46 189.5 193 52.8
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 7.2e-46 188.3 183 53.0
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 7.2e-46 188.3 193 50.8
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 1.2e-45 187.6 193 52.3
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 1.2e-45 187.6 193 52.3
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 1.2e-45 187.6 193 52.3
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 1.6e-45 187.2 192 52.1
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 2.7e-45 186.4 183 52.5
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 2.7e-45 186.4 171 55.6
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 3.5e-45 186.0 187 51.9
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 6.1e-45 185.3 199 50.3
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 6.1e-45 185.3 186 50.5
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 7.9e-45 184.9 192 51.6
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 1.0e-44 184.5 193 51.8
ClCG11G007410 Citrullus lanatus HOM05D004825 ORTHO05D005415 1.3e-44 184.1 194 51.5
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 1.8e-44 183.7 174 52.9
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.3e-44 183.3 167 56.9
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 5.1e-44 182.2 178 53.9
Solyc11g013080.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 1.1e-43 181.0 160 56.2
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.5e-43 180.6 193 50.8
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.5e-43 180.6 193 50.8
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 3.3e-43 179.5 182 50.5
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 3.3e-43 179.5 182 50.5
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 3.3e-43 179.5 182 50.5
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 5.7e-43 178.7 183 50.3
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 5.7e-43 178.7 170 52.4
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 9.7e-43 177.9 182 50.5
unitig_32.g11006 Utricularia gibba HOM05D004825 ORTHO05D005415 9.7e-43 177.9 177 52.5
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 1.6e-42 177.2 193 50.3
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.8e-42 176.4 180 51.1
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 3.7e-42 176.0 169 52.1
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 6.3e-42 175.3 186 48.4
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 1.1e-41 174.5 172 52.3
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 6.9e-41 171.8 170 55.3
CARHR056570 Cardamine hirsuta HOM05D004825 ORTHO05D005415 1.7e-39 167.2 171 52.0
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 2.2e-39 166.8 181 46.4
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 2.9e-39 166.4 185 48.6
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 5.0e-39 165.6 140 59.3
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 3.3e-35 152.9 189 43.9
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 8.2e-34 148.3 190 43.7
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 8.5e-31 138.3 193 43.0
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 3.7e-26 122.9 178 39.3
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 9.1e-25 118.2 168 38.7
PGSC0003DMG400018032 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.3e-23 114.4 113 49.6
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 1.7e-23 114.0 170 40.0
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 1.5e-22 110.9 173 37.0
Cpa.g.c33279 Carica papaya HOM05D004825 ORTHO05D005415 9.4e-22 108.2 89 57.3
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 2.3e-20 103.6 171 33.9
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 3.0e-20 103.2 97 55.7
PGSC0003DMG400014032 Solanum tuberosum HOM05D004825 ORTHO05D005415 3.0e-20 103.2 85 56.5
PGSC0003DMG401000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 5.2e-20 102.4 85 56.5
Cpa.g.sc18.189 Carica papaya HOM05D004825 ORTHO05D005415 9.1e-17 91.7 70 65.7
SGA_v2.0_scaffold71G24001 Striga asiatica HOM05D004825 ORTHO05D005415 3.6e-13 79.7 235 31.1
Glyma.09G252466 Glycine max HOM05D004825 ORTHO05D005415 6.8e-12 75.5 70 57.1
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 2.0e-11 73.9 69 55.1
AagrBONN_evm.TU.Sc2ySwM_340.165 Anthoceros agrestis HOM05D004825 ORTHO05D005415 2.8e-10 70.1 163 29.4


User provided reference genes

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