Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 8.9e-204 713.4 359 100.0
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 2.9e-170 602.1 359 83.6
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 6.7e-167 590.9 359 83.6
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.2e-155 553.5 361 78.4
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.8e-148 529.6 361 75.9
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 4.2e-145 518.5 337 78.6
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 4.4e-126 455.3 360 65.3
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 4.8e-125 451.8 359 67.1
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 2.4e-124 449.5 362 65.2
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.3e-122 443.7 361 65.7
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.9e-121 439.9 359 65.2
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 4.2e-121 438.7 360 63.6
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.0e-119 432.6 357 63.9
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 1.3e-117 427.2 360 64.2
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 2.2e-117 426.4 364 63.5
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 8.3e-117 424.5 388 59.5
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.4e-116 423.7 379 60.9
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.6e-115 420.2 364 64.0
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.7e-115 419.5 360 62.8
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 1.1e-113 414.1 264 78.0
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.9e-113 413.3 379 59.9
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 9.4e-113 411.0 308 67.9
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 3.6e-112 409.1 404 57.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.8e-111 406.8 347 62.0
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 2.6e-110 402.9 307 66.8
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 9.8e-110 401.0 362 62.2
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.7e-109 400.2 364 59.3
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 6.3e-109 398.3 355 59.2
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.4e-108 397.1 363 58.4
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 4.1e-108 395.6 360 58.9
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.9e-105 386.7 359 58.2
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 9.5e-105 384.4 317 63.1
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 2.1e-104 383.3 304 64.8
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 3.6e-104 382.5 347 59.7
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 8.0e-104 381.3 385 56.6
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 3.0e-103 379.4 367 58.0
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 3.0e-103 379.4 354 59.3
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 4.0e-103 379.0 349 59.0
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 5.2e-103 378.6 316 62.7
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 6.8e-103 378.3 366 57.7
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-102 377.5 384 55.2
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.2e-102 377.5 384 55.2
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.2e-102 377.5 380 55.8
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.5e-102 377.1 308 63.6
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 2.6e-102 376.3 362 56.9
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 4.4e-102 375.6 358 56.7
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 7.5e-102 374.8 349 59.3
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.7e-101 373.6 360 58.1
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 2.8e-101 372.9 385 55.1
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.8e-101 372.9 356 57.6
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 3.7e-101 372.5 345 56.5
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.7e-101 372.5 308 63.0
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 3.7e-101 372.5 372 56.7
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 6.3e-101 371.7 345 58.6
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.4e-100 370.5 348 58.6
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.8e-100 370.2 326 60.1
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 2.4e-100 369.8 316 61.7
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 5.4e-100 368.6 357 57.1
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 7.0e-100 368.2 383 54.8
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.2e-99 367.5 259 72.2
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 2.0e-99 366.7 280 65.7
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 2.7e-99 366.3 343 58.0
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 2.9e-98 362.8 303 61.4
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 5.0e-98 362.1 263 67.7
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 6.6e-98 361.7 262 67.6
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 8.6e-98 361.3 337 57.0
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 1.5e-97 360.5 348 56.6
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.9e-97 360.1 329 57.8
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 4.3e-97 359.0 371 57.1
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.6e-96 357.1 361 55.4
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.6e-96 357.1 340 57.6
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.6e-96 357.1 330 58.2
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 2.1e-96 356.7 387 53.2
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.6e-96 355.9 341 56.9
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.0e-95 354.4 340 57.4
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.8e-95 353.6 345 55.9
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 2.3e-95 353.2 312 59.6
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 3.1e-95 352.8 357 55.2
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 5.2e-95 352.1 390 52.6
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 6.8e-95 351.7 354 55.6
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.2e-94 350.9 291 63.9
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 2.6e-94 349.7 246 71.5
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 3.4e-94 349.4 275 66.2
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 5.8e-94 348.6 306 58.8
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 7.5e-94 348.2 355 55.5
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.9e-92 343.6 231 73.2
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 5.4e-92 342.0 329 55.9
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 7.0e-92 341.7 306 59.8
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.6e-91 340.5 358 53.4
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 4.6e-91 339.0 287 62.7
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 6.0e-91 338.6 262 66.4
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 2.3e-90 336.7 395 50.6
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.2e-88 330.9 353 51.8
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 2.8e-88 329.7 258 65.1
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 3.6e-88 329.3 287 61.3
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.8e-87 327.0 361 51.8
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 2.3e-87 326.6 353 51.6
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 5.2e-87 325.5 264 62.9
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 1.5e-86 323.9 298 59.7
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.9e-85 319.7 218 72.0
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 6.4e-85 318.5 202 78.2
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.1e-84 317.8 254 63.4
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.4e-79 300.8 309 53.7
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 2.9e-77 293.1 187 75.9
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 3.7e-77 292.7 236 67.4
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 6.2e-72 275.4 247 57.5
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 2.1e-67 260.4 257 50.6
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 3.0e-66 256.5 150 83.3
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.1e-65 254.6 270 49.6
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 2.5e-65 253.4 184 65.2
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 7.3e-65 251.9 270 48.9
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 4.0e-55 219.5 195 56.4
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 3.4e-54 216.5 121 85.1
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 6.4e-53 212.2 177 60.5
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 9.3e-52 208.4 173 58.4
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 4.6e-51 206.1 182 56.6
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 6.7e-50 202.2 103 91.3
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.5e-49 200.3 182 54.4
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 9.7e-33 145.2 79 82.3
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 1.4e-31 141.4 69 91.3
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 4.2e-20 103.2 198 38.4
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 5.3e-15 86.3 58 67.2
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 8.5e-13 79.0 135 35.6
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 1.5e-09 68.2 152 31.6
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 5.7e-09 66.2 136 36.8
Cpa.g.c35203 Carica papaya HOM05D005712 ORTHO05D007865 2.2e-08 64.3 66 54.5
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 2.8e-08 63.9 56 62.5
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 8.2e-08 62.4 43 69.8
HPP92_022533 Vanilla planifolia HOM05D004721 ORTHO05D005765 5.9e-06 56.2 80 42.5


User provided reference genes

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