Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 8.3e-87 323.6 151 100.0
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.7e-85 318.5 151 98.7
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.6e-80 302.0 146 95.2
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 2.2e-79 298.9 151 90.1
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.4e-78 295.4 150 92.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.1e-77 292.4 151 88.1
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 6.0e-77 290.8 150 88.0
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 7.8e-77 290.4 151 86.8
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.0e-76 290.0 148 87.8
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.0e-76 290.0 152 88.8
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.7e-76 289.3 151 87.4
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 2.3e-76 288.9 148 87.2
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.9e-76 288.1 151 86.8
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.1e-76 287.7 148 87.8
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 8.6e-76 287.0 148 87.8
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 8.6e-76 287.0 149 88.6
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 8.6e-76 287.0 149 88.6
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.1e-75 286.6 149 86.6
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.5e-75 286.2 149 85.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.5e-75 286.2 149 85.2
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.9e-75 285.8 151 84.8
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 2.5e-75 285.4 151 85.4
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.5e-75 285.4 149 87.2
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 3.3e-75 285.0 148 87.2
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 3.3e-75 285.0 149 87.9
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 4.3e-75 284.6 151 86.1
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.2e-74 283.1 148 85.1
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.6e-74 282.7 148 84.5
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.1e-74 282.3 148 84.5
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.1e-74 282.3 150 85.3
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.8e-74 282.0 148 83.8
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 3.6e-74 281.6 151 85.4
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 4.7e-74 281.2 148 84.5
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 8.1e-74 280.4 148 83.8
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-73 280.0 148 84.5
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 1.4e-73 279.6 151 84.8
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.4e-73 279.6 142 86.6
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.8e-73 279.3 151 84.1
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.8e-73 279.3 152 84.9
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 2.4e-73 278.9 151 81.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.4e-73 278.9 146 85.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 3.1e-73 278.5 148 83.1
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 4.0e-73 278.1 146 84.2
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 6.9e-73 277.3 146 85.6
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.9e-73 277.3 151 84.8
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 8.9e-73 276.9 146 84.2
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.2e-72 276.6 151 82.1
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.2e-72 276.6 151 82.1
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.5e-72 276.2 150 82.0
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.0e-72 275.8 149 83.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.6e-72 275.4 149 81.2
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.6e-72 275.4 149 84.6
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 2.6e-72 275.4 151 82.8
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 4.4e-72 274.6 148 83.1
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 4.4e-72 274.6 156 80.1
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 7.6e-72 273.9 151 82.8
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.6e-72 273.9 151 82.8
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.6e-72 273.9 151 82.8
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 9.9e-72 273.5 142 83.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 9.9e-72 273.5 142 84.5
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 9.9e-72 273.5 149 82.6
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 9.9e-72 273.5 142 87.3
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.3e-71 273.1 151 83.4
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.3e-71 273.1 149 84.6
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.3e-71 273.1 149 84.6
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.3e-71 273.1 151 82.8
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 2.2e-71 272.3 154 79.9
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 4.9e-71 271.2 151 81.5
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 6.4e-71 270.8 151 79.5
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 6.4e-71 270.8 151 82.1
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 8.4e-71 270.4 148 80.4
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 8.4e-71 270.4 151 81.5
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.9e-70 269.2 151 81.5
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.2e-70 268.1 151 78.8
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 5.4e-70 267.7 151 79.5
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.4e-70 267.7 145 84.1
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 9.3e-70 266.9 151 78.1
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.6e-69 266.2 151 80.1
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.6e-69 266.2 151 78.1
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 3.5e-69 265.0 152 78.9
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 6.0e-69 264.2 147 83.0
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 7.8e-69 263.8 145 79.3
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.3e-68 263.1 149 79.2
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 8.7e-68 260.4 145 82.1
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 8.7e-68 260.4 150 79.3
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 2.5e-67 258.8 204 61.8
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 7.3e-67 257.3 152 76.3
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 3.1e-65 251.9 138 82.6
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 4.0e-65 251.5 152 74.3
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.5e-64 249.6 151 76.8
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.0e-64 249.2 151 77.5
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 2.6e-64 248.8 146 77.4
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.6e-64 248.8 148 73.0
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 4.5e-64 248.1 148 72.3
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.7e-63 246.1 148 75.0
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.8e-63 245.0 148 71.6
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 8.4e-63 243.8 127 85.8
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 9.3e-62 240.4 138 77.5
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 8.7e-60 233.8 145 71.0
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.3e-59 231.5 125 81.6
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 5.6e-59 231.1 123 83.7
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 6.2e-58 227.6 128 80.5
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.1e-57 226.9 117 88.0
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.1e-57 225.3 142 75.4
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.2e-55 219.2 137 74.5
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.0e-52 208.8 142 62.0
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 8.7e-52 207.2 142 62.7
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.1e-51 206.8 173 60.7
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.5e-51 205.7 116 80.2
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 9.6e-51 203.8 130 71.5
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.7e-50 201.8 142 60.6
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 9.0e-49 197.2 105 83.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 4.5e-48 194.9 132 67.4
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 4.5e-48 194.9 102 84.3
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 3.8e-47 191.8 109 80.7
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.4e-47 190.7 149 63.8
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 3.5e-45 185.3 95 86.3
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.8e-44 183.0 96 81.2
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 2.1e-42 176.0 104 74.0
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 3.4e-40 168.7 89 82.0
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.2e-38 161.8 75 98.7
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 4.6e-37 158.3 141 59.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 3.9e-36 155.2 132 54.5
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 6.9e-33 144.4 76 86.8
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.0e-31 140.6 123 59.3
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 7.9e-29 131.0 73 82.2
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 8.8e-20 100.9 52 84.6
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.8e-17 93.2 60 70.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 2.4e-09 66.2 71 46.5


User provided reference genes

Program Settings