Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.4e-113 412.9 204 100.0
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 2.6e-91 339.0 191 86.4
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 8.3e-90 334.0 191 85.9
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 7.8e-88 327.4 192 83.9
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 7.8e-88 327.4 192 83.9
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.7e-87 326.2 192 83.9
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 8.9e-76 287.3 191 70.2
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.2e-75 287.0 189 73.5
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 5.8e-75 284.6 191 70.2
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 9.9e-75 283.9 191 70.2
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 1.3e-74 283.5 185 73.5
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 2.2e-74 282.7 185 74.1
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 3.8e-74 282.0 191 70.2
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 6.4e-74 281.2 191 71.2
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 8.4e-74 280.8 191 68.6
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 8.4e-74 280.8 191 68.1
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.1e-73 280.4 191 68.1
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 1.4e-73 280.0 191 68.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.4e-73 280.0 191 68.1
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.4e-73 280.0 191 68.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.9e-73 279.6 191 68.1
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.9e-73 279.6 191 68.1
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 1.9e-73 279.6 191 68.6
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.2e-73 278.5 191 72.8
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 4.2e-73 278.5 191 69.6
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 9.3e-73 277.3 191 67.5
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 9.3e-73 277.3 191 67.5
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 9.3e-73 277.3 191 67.5
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 9.3e-73 277.3 189 72.0
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 1.2e-72 276.9 189 71.4
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 1.2e-72 276.9 191 67.5
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 2.1e-72 276.2 191 67.0
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 2.7e-72 275.8 189 72.0
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.7e-72 275.8 191 71.7
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 3.5e-72 275.4 190 69.5
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.7e-71 273.1 190 68.9
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 2.3e-71 272.7 186 71.0
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 2.3e-71 272.7 186 70.4
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.9e-71 271.9 197 70.6
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.9e-71 271.9 197 70.6
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 6.6e-71 271.2 188 70.2
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 8.7e-71 270.8 185 70.8
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 1.1e-70 270.4 185 72.4
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 1.1e-70 270.4 191 71.2
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.1e-70 270.4 186 69.9
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 2.5e-70 269.2 224 62.1
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 2.1e-69 266.2 191 70.7
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 2.1e-69 266.2 191 70.7
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.8e-69 265.8 191 69.1
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 2.8e-69 265.8 185 71.4
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 3.6e-69 265.4 191 70.7
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 6.2e-69 264.6 191 70.2
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 8.1e-69 264.2 185 70.3
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.4e-68 263.5 190 70.5
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 1.4e-68 263.5 189 70.9
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 1.8e-68 263.1 186 70.4
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 2.4e-68 262.7 185 70.3
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 4.0e-68 261.9 185 69.7
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.3e-68 261.5 205 65.4
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 6.9e-68 261.2 189 69.3
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 6.9e-68 261.2 189 69.3
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 6.9e-68 261.2 207 66.2
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 9.0e-68 260.8 191 66.5
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 1.2e-67 260.4 192 65.6
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.5e-67 260.0 182 70.3
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 2.6e-67 259.2 193 65.8
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 3.4e-67 258.8 188 68.6
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 4.4e-67 258.5 185 70.3
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 5.8e-67 258.1 188 68.6
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 1.3e-66 256.9 190 67.4
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 2.2e-66 256.1 185 69.2
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 2.9e-66 255.8 190 66.8
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 1.1e-65 253.8 185 68.6
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.9e-65 253.1 186 67.7
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 3.2e-65 252.3 186 65.6
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 5.4e-65 251.5 186 67.7
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 7.1e-65 251.1 189 66.1
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 7.1e-65 251.1 167 74.9
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 9.3e-65 250.8 185 68.1
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.2e-64 250.4 185 67.0
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 1.6e-64 250.0 187 65.2
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 2.7e-64 249.2 186 66.7
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 3.5e-64 248.8 185 66.5
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 3.5e-64 248.8 192 63.5
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 6.0e-64 248.1 186 66.1
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 6.0e-64 248.1 189 66.1
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 1.0e-63 247.3 185 67.0
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 1.0e-63 247.3 189 64.6
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 1.7e-63 246.5 183 66.7
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 2.3e-63 246.1 191 66.5
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 3.9e-63 245.4 194 63.4
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.5e-62 243.4 186 62.9
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 2.5e-62 242.7 190 65.3
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 4.3e-62 241.9 189 63.5
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.8e-61 239.2 186 66.1
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 1.1e-60 237.3 186 64.0
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 1.2e-59 233.8 185 61.1
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 8.4e-58 227.6 191 58.6
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 8.4e-58 227.6 185 61.6
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.9e-57 226.5 185 64.3
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 2.4e-57 226.1 191 60.2
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 1.9e-54 216.5 148 73.0
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.8e-53 211.8 158 62.7
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 6.2e-53 211.5 158 65.8
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 1.2e-51 207.2 186 59.7
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 2.6e-51 206.1 191 57.6
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 7.6e-51 204.5 187 55.1
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 1.0e-50 204.1 135 73.3
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 1.7e-50 203.4 195 53.8
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 2.2e-50 203.0 138 73.9
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.9e-50 202.6 186 58.1
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.9e-50 202.6 191 57.1
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.9e-50 201.8 190 56.8
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.1e-49 200.7 185 57.8
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 3.9e-47 192.2 260 45.8
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 6.7e-47 191.4 134 69.4
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 6.3e-45 184.9 135 67.4
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 8.5e-42 174.5 132 64.4
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 2.3e-39 166.4 189 43.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 5.7e-38 161.8 187 45.5
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 2.6e-30 136.3 108 63.0
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 4.1e-28 129.0 175 38.9
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 3.6e-24 115.9 184 34.2
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 7.2e-17 91.7 64 71.9
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 2.7e-11 73.2 52 67.3
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 2.7e-11 73.2 52 67.3


User provided reference genes

Program Settings