Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07303 Corchorus olitorius HOM05D000476 ORTHO05D017214 2.7e-95 352.1 188 100.0
COL.COLO4_34241 Corchorus olitorius HOM05D000476 ORTHO05D017214 8.4e-20 101.3 58 93.1
COL.COLO4_17948 Corchorus olitorius HOM05D000476 ORTHO05D002733 7.1e-19 98.2 58 89.7
COL.COLO4_24462 Corchorus olitorius HOM05D000476 ORTHO05D017214 2.1e-18 96.7 58 89.7
Thecc.02G047400 Theobroma cacao HOM05D000476 ORTHO05D002733 6.6e-17 91.7 58 82.8
Duzib132G0419 Durio zibethinus HOM05D000476 ORTHO05D002733 9.6e-16 87.8 58 79.3
Duzib052G0277 Durio zibethinus HOM05D000476 ORTHO05D002733 2.8e-15 86.3 53 83.0
Gohir.A12G034000 Gossypium hirsutum HOM05D000476 ORTHO05D002733 2.8e-15 86.3 58 77.6
COL.COLO4_27738 Corchorus olitorius HOM05D000312 ORTHO05D000221 3.6e-15 85.9 46 87.0
Gohir.D12G038500 Gossypium hirsutum HOM05D000476 ORTHO05D002733 1.1e-14 84.3 58 75.9
Gorai.008G040200 Gossypium raimondii HOM05D000476 ORTHO05D002733 1.1e-14 84.3 58 75.9
Duzib248G0277 Durio zibethinus HOM05D000476 ORTHO05D002733 1.8e-14 83.6 50 86.0
Gohir.A01G173400 Gossypium hirsutum HOM05D000476 ORTHO05D002733 5.3e-14 82.0 58 77.6
Gohir.D01G165000 Gossypium hirsutum HOM05D000476 ORTHO05D002733 2.0e-13 80.1 58 75.9
TWI31G1199 Tripterygium wilfordii HOM05D000476 ORTHO05D002733 6.4e-12 75.1 58 69.0
Gorai.002G205400 Gossypium raimondii HOM05D000476 ORTHO05D002733 1.1e-11 74.3 64 65.6
Gohir.D04G103750 Gossypium hirsutum HOM05D000476 ORTHO05D017214 9.3e-11 71.2 55 72.7
Gohir.D08G219500 Gossypium hirsutum HOM05D000476 ORTHO05D017214 9.3e-11 71.2 55 72.7
Gohir.D10G134150 Gossypium hirsutum HOM05D000476 ORTHO05D017214 9.3e-11 71.2 55 72.7
Manes.11G106600 Manihot esculenta HOM05D000476 ORTHO05D002733 1.2e-10 70.9 58 62.1
Gohir.A03G208900 Gossypium hirsutum HOM05D000476 ORTHO05D002733 1.6e-10 70.5 42 83.3
Gohir.D02G230600 Gossypium hirsutum HOM05D000476 ORTHO05D002733 1.6e-10 70.5 42 83.3
Gorai.005G258200 Gossypium raimondii HOM05D000476 ORTHO05D002733 1.6e-10 70.5 42 83.3
TWI75G1315 Tripterygium wilfordii HOM05D000476 ORTHO05D002733 2.7e-10 69.7 58 63.8
Atru.chr5.3502 Acer truncatum HOM05D000476 ORTHO05D002733 6.0e-10 68.6 59 66.1
Cpa.g.sc20.181 Carica papaya HOM05D000476 ORTHO05D002733 6.0e-10 68.6 98 48.0
CANSAT25G0999 Cannabis sativa HOM05D000476 ORTHO05D002733 1.3e-09 67.4 58 69.0
Ciclev10027792m.g Citrus clementina HOM05D000476 ORTHO05D002733 1.3e-09 67.4 58 58.6
Dinv41890 Davidia involucrata HOM05D000476 ORTHO05D002733 3.0e-09 66.2 60 60.0
Prupe.8G176200 Prunus persica HOM05D000476 ORTHO05D002733 3.9e-09 65.9 84 50.0
Dinv14153 Davidia involucrata HOM05D000476 ORTHO05D002733 8.7e-09 64.7 61 57.4
Manes.04G065500 Manihot esculenta HOM05D000476 ORTHO05D002733 1.5e-08 63.9 55 58.2
TAR381G0165 Trochodendron aralioides HOM05D000476 ORTHO05D002733 2.5e-08 63.2 58 56.9
PGR142G3940 Punica granatum HOM05D000476 ORTHO05D002733 3.3e-08 62.8 58 65.5
Migut.B00023 Erythranthe guttata HOM05D000476 ORTHO05D002733 4.3e-08 62.4 86 45.3
Hma1.2p1_0336F.1_g128950 Hydrangea macrophylla HOM05D000476 ORTHO05D017214 4.3e-08 62.4 59 55.9
TAR376G0362 Trochodendron aralioides HOM05D000476 ORTHO05D002733 4.3e-08 62.4 58 55.2
FvH4_2g16330 Fragaria vesca HOM05D000476 ORTHO05D002733 9.6e-08 61.2 58 63.8
FAN24G0897 Fragaria x ananassa HOM05D000476 ORTHO05D002733 9.6e-08 61.2 58 63.8
FAN24G1539 Fragaria x ananassa HOM05D000476 ORTHO05D002733 9.6e-08 61.2 58 63.8
Hma1.2p1_0032F.1_g018870 Hydrangea macrophylla HOM05D000476 ORTHO05D002733 9.6e-08 61.2 60 56.7
RcHm_v2.0_Chr6g0280091 Rosa chinensis HOM05D000476 ORTHO05D002733 9.6e-08 61.2 58 62.1
Actinidia32019 Actinidia chinensis HOM05D000476 ORTHO05D002733 1.6e-07 60.5 57 57.9
Eucgr.I01506 Eucalyptus grandis HOM05D000476 ORTHO05D002733 1.6e-07 60.5 123 39.0
GSVIVG01023932001 Vitis vinifera HOM05D000476 ORTHO05D002733 2.1e-07 60.1 94 43.6
MSTRG.16948 Avicennia marina HOM05D000476 ORTHO05D002733 2.8e-07 59.7 62 51.6
FAN27G0633 Fragaria x ananassa HOM05D000476 ORTHO05D002733 3.7e-07 59.3 58 62.1
MD10G1134700 Malus domestica HOM05D000476 ORTHO05D002733 3.7e-07 59.3 84 51.2
Sabra09G0110700 Salix brachista HOM05D000476 ORTHO05D002733 4.8e-07 58.9 59 57.6
Nn5g30916 Nelumbo nucifera HOM05D000476 ORTHO05D002733 6.2e-07 58.5 55 58.2
TWI79G1518 Tripterygium wilfordii HOM05D000312 ORTHO05D000221 6.2e-07 58.5 44 59.1
CiPaw.05G090100 Carya illinoinensis HOM05D000476 ORTHO05D002733 1.1e-06 57.8 59 57.6
Rhsim11G0196200 Rhododendron simsii HOM05D000476 ORTHO05D002733 1.1e-06 57.8 95 48.4
THA.LOC104804308 Tarenaya hassleriana HOM05D000476 ORTHO05D002733 1.4e-06 57.4 58 56.9
MSTRG.11841 Avicennia marina HOM05D000312 ORTHO05D000221 1.8e-06 57.0 44 54.5
Haze_02039 Corylus avellana HOM05D000476 ORTHO05D002733 1.8e-06 57.0 56 62.5
Lalb_Chr04g0246971 Lupinus albus HOM05D000476 ORTHO05D002733 1.8e-06 57.0 58 58.6
LjContig00081g0004871 Lotus japonicus HOM05D000476 ORTHO05D002733 2.4e-06 56.6 58 56.9
SalBow1G1730 Salvia bowleyana HOM05D000476 ORTHO05D002733 2.4e-06 56.6 44 61.4
TWI75G1896 Tripterygium wilfordii HOM05D000312 ORTHO05D000221 2.4e-06 56.6 79 43.0
Actinidia26337 Actinidia chinensis HOM05D000476 ORTHO05D002733 3.1e-06 56.2 92 44.6
ATR0661G378 Amborella trichopoda HOM05D000476 ORTHO05D002733 3.1e-06 56.2 49 57.1
SGA_v2.0_scaffold58G20325 Striga asiatica HOM05D000476 ORTHO05D002733 4.0e-06 55.8 85 43.5
TAR628G1137 Trochodendron aralioides HOM05D000476 ORTHO05D002733 4.0e-06 55.8 96 41.7
Duzib106G1684 Durio zibethinus HOM05D000051 ORTHO05D000015 5.3e-06 55.5 81 39.5
QL08p012534 Quercus lobata HOM05D000051 ORTHO05D000015 5.3e-06 55.5 55 50.9
Rhsim12G0067300 Rhododendron simsii HOM05D000312 ORTHO05D000221 5.3e-06 55.5 43 53.5
Cfa005338 Carpinus fangiana HOM05D000476 ORTHO05D002733 6.9e-06 55.1 56 62.5
Sp3g30410 Schrenkiella parvula HOM05D000476 ORTHO05D002733 6.9e-06 55.1 56 57.1
SGA_v2.0_scaffold32G13332 Striga asiatica HOM05D000476 ORTHO05D002733 6.9e-06 55.1 86 43.0
AT2G17110 Arabidopsis thaliana HOM05D000476 ORTHO05D002733 9.0e-06 54.7 92 40.2


User provided reference genes

Program Settings