Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07222 Corchorus olitorius HOM05D001527 ORTHO05D028492 1.6e-33 145.6 78 100.0
COL.COLO4_29883 Corchorus olitorius HOM05D001527 ORTHO05D001492 3.4e-23 111.3 76 86.8
Thecc.01G167100 Theobroma cacao HOM05D001527 ORTHO05D001492 4.0e-16 87.8 75 68.0
TWI14G0827 Tripterygium wilfordii HOM05D001527 ORTHO05D001492 1.5e-15 85.9 72 69.4
Duzib147G0946 Durio zibethinus HOM05D001527 ORTHO05D001492 9.8e-15 83.2 77 68.8
Prupe.3G178800 Prunus persica HOM05D001527 ORTHO05D001492 1.7e-14 82.4 74 66.2
Ciclev10031020m.g Citrus clementina HOM05D001527 ORTHO05D001492 2.9e-14 81.6 71 67.6
Potri.002G056500 Populus trichocarpa HOM05D001527 ORTHO05D001492 2.9e-14 81.6 72 65.3
QL08p045462 Quercus lobata HOM05D001527 ORTHO05D001492 2.9e-14 81.6 71 70.4
MSTRG.14103 Avicennia marina HOM05D001527 ORTHO05D001492 4.9e-14 80.9 72 65.3
Lj1A588G25 Lonicera japonica HOM05D001527 ORTHO05D001492 1.1e-13 79.7 72 63.9
Cc05_g01250 Coffea canephora HOM05D001527 ORTHO05D001492 7.0e-13 77.0 71 62.0
MD17G1133300 Malus domestica HOM05D001527 ORTHO05D001492 7.0e-13 77.0 76 63.2
Cfa023018 Carpinus fangiana HOM05D001527 ORTHO05D001492 9.2e-13 76.6 71 66.2
Dinv15394 Davidia involucrata HOM05D001527 ORTHO05D001492 9.2e-13 76.6 74 62.2
MD09G1146600 Malus domestica HOM05D001527 ORTHO05D001492 1.6e-12 75.9 73 60.3
TWI23G0078 Tripterygium wilfordii HOM05D001527 ORTHO05D001492 1.6e-12 75.9 72 61.1
Gohir.A09G008200 Gossypium hirsutum HOM05D001527 ORTHO05D001492 2.7e-12 75.1 78 59.0
SGA_v2.0_scaffold181G39716 Striga asiatica HOM05D001527 ORTHO05D001492 3.5e-12 74.7 72 61.1
MSTRG.12263 Avicennia marina HOM05D001527 ORTHO05D001492 7.8e-12 73.6 72 61.1
Sabra02G0045800 Salix brachista HOM05D001527 ORTHO05D001492 7.8e-12 73.6 72 59.7
LjContig00049g0001725 Lotus japonicus HOM05D001527 ORTHO05D028492 1.0e-11 73.2 70 62.9
SalBow7G3274 Salvia bowleyana HOM05D001527 ORTHO05D001492 1.0e-11 73.2 72 59.7
Haze_13616 Corylus avellana HOM05D001527 ORTHO05D001492 1.7e-11 72.4 71 63.4
LjContig00049g0021178 Lotus japonicus HOM05D001527 ORTHO05D001492 1.7e-11 72.4 70 61.4
Sabra05G0156700 Salix brachista HOM05D001527 ORTHO05D001492 2.3e-11 72.0 72 61.1
TPR.G17508 Trifolium pratense HOM05D001527 ORTHO05D001492 2.9e-11 71.6 72 63.9
VMungo0647G0780 Vigna mungo HOM05D001527 ORTHO05D001492 2.9e-11 71.6 71 60.6
CANSAT64G1901 Cannabis sativa HOM05D001527 ORTHO05D001492 3.9e-11 71.2 73 60.3
Migut.M00077 Erythranthe guttata HOM05D001527 ORTHO05D001492 5.0e-11 70.9 73 61.6
Glyma.02G283300 Glycine max HOM05D001527 ORTHO05D001492 1.1e-10 69.7 70 55.7
MBI18_g29064_MAGBIO Magnolia biondii HOM05D001527 ORTHO05D001492 1.9e-10 68.9 73 57.5
Nitab4.5_0000019g0260 Nicotiana tabacum HOM05D001527 ORTHO05D001492 1.9e-10 68.9 71 60.6
Nitab4.5_0014645g0010 Nicotiana tabacum HOM05D001527 ORTHO05D001492 1.9e-10 68.9 71 59.2
Phvul.008G195900 Phaseolus vulgaris HOM05D001527 ORTHO05D001492 1.9e-10 68.9 70 55.7
RcHm_v2.0_Chr2g0152421 Rosa chinensis HOM05D001527 ORTHO05D001492 2.5e-10 68.6 71 56.3
Ciclev10017873m.g Citrus clementina HOM05D001527 ORTHO05D001492 4.3e-10 67.8 72 59.7
Actinidia18851 Actinidia chinensis HOM05D001527 ORTHO05D001492 5.6e-10 67.4 72 61.1
FAN21G1721 Fragaria x ananassa HOM05D001527 ORTHO05D001492 5.6e-10 67.4 72 58.3
Atru.chr10.591 Acer truncatum HOM05D001527 ORTHO05D001492 7.3e-10 67.0 72 56.9
FvH4_3g11950 Fragaria vesca HOM05D001527 ORTHO05D001492 7.3e-10 67.0 72 58.3
FAN16G1790 Fragaria x ananassa HOM05D001527 ORTHO05D001492 7.3e-10 67.0 72 58.3
FAN25G3048 Fragaria x ananassa HOM05D001527 ORTHO05D001492 7.3e-10 67.0 72 58.3
Nn7g38044 Nelumbo nucifera HOM05D001527 ORTHO05D001492 7.3e-10 67.0 73 54.8
Nn7g38496 Nelumbo nucifera HOM05D001527 ORTHO05D001492 7.3e-10 67.0 73 54.8
Prupe.4G107800 Prunus persica HOM05D001527 ORTHO05D001492 7.3e-10 67.0 71 54.9
Oeu040160.1 Olea europaea HOM05D001527 ORTHO05D001492 9.5e-10 66.6 70 61.4
RcHm_v2.0_Chr2g0152441 Rosa chinensis HOM05D001527 ORTHO05D001492 9.5e-10 66.6 71 57.7
TPR.G8784 Trifolium pratense HOM05D001527 ORTHO05D001492 9.5e-10 66.6 71 60.6
TWI38G0637 Tripterygium wilfordii HOM05D001527 ORTHO05D001492 9.5e-10 66.6 72 56.9
Sabra12G0090100 Salix brachista HOM05D001527 ORTHO05D001492 1.2e-09 66.2 72 54.2
Glyma.14G031300 Glycine max HOM05D001527 ORTHO05D001492 1.6e-09 65.9 70 52.9
Potri.005G206100 Populus trichocarpa HOM05D001527 ORTHO05D001492 1.6e-09 65.9 72 56.9
Lalb_Chr17g0348171 Lupinus albus HOM05D001527 ORTHO05D001492 2.1e-09 65.5 71 56.3
MD10G1236700 Malus domestica HOM05D001527 ORTHO05D001492 2.1e-09 65.5 71 57.7
Nitab4.5_0007814g0030 Nicotiana tabacum HOM05D001527 ORTHO05D001492 2.1e-09 65.5 71 56.3
ClCG07G010770 Citrullus lanatus HOM05D001527 ORTHO05D001492 2.8e-09 65.1 74 58.1
Potri.012G118500 Populus trichocarpa HOM05D001527 ORTHO05D001492 2.8e-09 65.1 72 54.2
Ca_11348_v3 Cicer arietinum L. HOM05D001527 ORTHO05D001492 3.6e-09 64.7 71 56.3
ECA232G1091 Erigeron canadensis HOM05D001527 ORTHO05D001492 4.7e-09 64.3 76 52.6
Nitab4.5_0001552g0090 Nicotiana tabacum HOM05D001527 ORTHO05D001492 4.7e-09 64.3 71 56.3
Cpa.g.sc50.119 Carica papaya HOM05D001527 ORTHO05D001492 6.2e-09 63.9 71 62.0
Lj6g0009648 Lotus japonicus HOM05D001527 ORTHO05D001492 6.2e-09 63.9 68 60.3
Potri.015G117200 Populus trichocarpa HOM05D001527 ORTHO05D001492 6.2e-09 63.9 72 55.6
Cpa.g.sc135.42 Carica papaya HOM05D001527 ORTHO05D001492 8.0e-09 63.5 72 54.2
Ca_11745_v3 Cicer arietinum L. HOM05D001527 ORTHO05D001492 8.0e-09 63.5 70 57.1
Psat2g017520 Pisum sativum HOM05D001527 ORTHO05D001492 8.0e-09 63.5 71 57.7
Cfa000735 Carpinus fangiana HOM05D001527 ORTHO05D001492 1.4e-08 62.8 73 57.5
Haze_06007 Corylus avellana HOM05D001527 ORTHO05D001492 1.4e-08 62.8 73 57.5
Hma1.2p1_0365F.1_g136710 Hydrangea macrophylla HOM05D001527 ORTHO05D001492 1.4e-08 62.8 72 54.2
CAN.G946.7 Capsicum annuum HOM05D001527 ORTHO05D001492 1.8e-08 62.4 71 54.9
MD05G1256300 Malus domestica HOM05D001527 ORTHO05D001492 1.8e-08 62.4 66 57.6
VMungo0540G0551 Vigna mungo HOM05D001527 ORTHO05D001492 2.3e-08 62.0 68 57.4
arahy.Tifrunner.gnm1.ann1.R60CUW Arachis hypogaea HOM05D001527 ORTHO05D001492 3.1e-08 61.6 72 58.3
MELO3C016187.2 Cucumis melo HOM05D001527 ORTHO05D001492 3.1e-08 61.6 74 55.4
Medtr2g028950 Medicago truncatula HOM05D001527 ORTHO05D001492 3.1e-08 61.6 72 55.6
Phvul.006G131400 Phaseolus vulgaris HOM05D001527 ORTHO05D001492 3.1e-08 61.6 68 57.4
CiPaw.10G113000 Carya illinoinensis HOM05D001527 ORTHO05D001492 4.0e-08 61.2 71 53.5
CsaV3_4G007550 Cucumis sativus L. HOM05D001527 ORTHO05D001492 4.0e-08 61.2 74 55.4
FAN09G1762 Fragaria x ananassa HOM05D001527 ORTHO05D001492 4.0e-08 61.2 74 55.4
Glyma.15G127200 Glycine max HOM05D001527 ORTHO05D001492 4.0e-08 61.2 68 58.8
arahy.Tifrunner.gnm1.ann1.VK3CXU Arachis hypogaea HOM05D001527 ORTHO05D001492 6.8e-08 60.5 71 56.3
FvH4_6g38820 Fragaria vesca HOM05D001527 ORTHO05D001492 6.8e-08 60.5 74 55.4
FAN02G3091 Fragaria x ananassa HOM05D001527 ORTHO05D001492 6.8e-08 60.5 74 55.4
FAN14G4473 Fragaria x ananassa HOM05D001527 ORTHO05D001492 6.8e-08 60.5 74 55.4
Glyma.09G020800 Glycine max HOM05D001527 ORTHO05D001492 6.8e-08 60.5 68 57.4
arahy.Tifrunner.gnm1.ann1.KS67M3 Arachis hypogaea HOM05D001527 ORTHO05D001492 8.9e-08 60.1 71 54.9
FAN05G4741 Fragaria x ananassa HOM05D001527 ORTHO05D001492 8.9e-08 60.1 74 54.1
Sabra15G0135400 Salix brachista HOM05D001527 ORTHO05D001492 1.5e-07 59.3 72 56.9
Sed0027388 Sechium edule HOM05D001527 ORTHO05D001492 1.5e-07 59.3 71 46.5
Peaxi162Scf00359g01115 Petunia axillaris HOM05D001527 ORTHO05D001492 2.0e-07 58.9 71 57.7
Ca_06255_v3 Cicer arietinum L. HOM05D001527 ORTHO05D001492 2.6e-07 58.5 75 56.0
Gohir.D09G076700 Gossypium hirsutum HOM05D001527 ORTHO05D001492 2.6e-07 58.5 71 54.9
Gorai.006G091900 Gossypium raimondii HOM05D001527 ORTHO05D001492 2.6e-07 58.5 71 54.9
Lj2A354T53 Lonicera japonica HOM05D001527 ORTHO05D001492 2.6e-07 58.5 72 50.0
arahy.Tifrunner.gnm1.ann1.ZSLI3V Arachis hypogaea HOM05D001527 ORTHO05D001492 3.4e-07 58.2 72 55.6
Gohir.D09G007500 Gossypium hirsutum HOM05D001527 ORTHO05D001492 3.4e-07 58.2 78 50.0
Lsat_1_v5_gn_8_117861 Lactuca sativa HOM05D001527 ORTHO05D001492 3.4e-07 58.2 71 56.3
Manes.16G050900 Manihot esculenta HOM05D001527 ORTHO05D001492 3.4e-07 58.2 73 50.7
Gohir.A10G045900 Gossypium hirsutum HOM05D001527 ORTHO05D001492 5.8e-07 57.4 68 55.9
Gorai.011G050200 Gossypium raimondii HOM05D001527 ORTHO05D001492 5.8e-07 57.4 68 55.9
HanXRQChr12g0378171 Helianthus annuus HOM05D001527 ORTHO05D001492 5.8e-07 57.4 75 52.0
MD17G1133200 Malus domestica HOM05D001527 ORTHO05D028492 5.8e-07 57.4 74 54.1
Sed0006989 Sechium edule HOM05D001527 ORTHO05D001492 7.5e-07 57.0 74 54.1
Actinidia22374 Actinidia chinensis HOM05D001527 ORTHO05D001492 9.8e-07 56.6 71 52.1
MELO3C021795.2 Cucumis melo HOM05D001527 ORTHO05D001492 9.8e-07 56.6 71 45.1
Lalb_Chr18g0057771 Lupinus albus HOM05D001527 ORTHO05D001492 9.8e-07 56.6 73 54.8
CiPaw.09G152700 Carya illinoinensis HOM05D001527 ORTHO05D001492 1.3e-06 56.2 75 49.3
Oeu008980.1 Olea europaea HOM05D001527 ORTHO05D001492 1.3e-06 56.2 66 50.0
PGR031G2158 Punica granatum HOM05D001527 ORTHO05D001492 1.3e-06 56.2 72 51.4
Gohir.A09G076800 Gossypium hirsutum HOM05D001527 ORTHO05D001492 1.7e-06 55.8 70 54.3
Gohir.D10G047100 Gossypium hirsutum HOM05D001527 ORTHO05D001492 1.7e-06 55.8 68 54.4
Oeu056850.1 Olea europaea HOM05D001527 ORTHO05D001492 1.7e-06 55.8 72 52.8
QL11p018348 Quercus lobata HOM05D001527 ORTHO05D001492 1.7e-06 55.8 82 46.3
ClCG01G009050 Citrullus lanatus HOM05D001527 ORTHO05D001492 2.2e-06 55.5 71 45.1
FAN05G4630 Fragaria x ananassa HOM05D001527 ORTHO05D001492 2.2e-06 55.5 71 46.5
Lsat_1_v5_gn_5_36521 Lactuca sativa HOM05D001527 ORTHO05D001492 2.2e-06 55.5 81 49.4
Oeu022917.1 Olea europaea HOM05D001527 ORTHO05D001492 2.2e-06 55.5 71 50.7
Thecc.06G137100 Theobroma cacao HOM05D001527 ORTHO05D001492 2.2e-06 55.5 67 53.7
Dinv03470 Davidia involucrata HOM05D001527 ORTHO05D001492 2.9e-06 55.1 69 52.2
Duzib160G0578 Durio zibethinus HOM05D001527 ORTHO05D001492 2.9e-06 55.1 68 54.4
Rhsim13G0130800 Rhododendron simsii HOM05D001527 ORTHO05D001492 2.9e-06 55.1 70 50.0
Dinv03685 Davidia involucrata HOM05D001527 ORTHO05D001492 3.7e-06 54.7 72 50.0
HanXRQChr13g0406261 Helianthus annuus HOM05D001527 ORTHO05D001492 3.7e-06 54.7 76 46.1
COL.COLO4_30946 Corchorus olitorius HOM05D001527 ORTHO05D001492 6.4e-06 53.9 67 52.2
Psat1g169720 Pisum sativum HOM05D001527 ORTHO05D001492 6.4e-06 53.9 71 47.9
BraA02t07919Z Brassica rapa HOM05D001527 ORTHO05D001492 8.3e-06 53.5 67 52.2
FvH4_6g38830 Fragaria vesca HOM05D001527 ORTHO05D001492 8.3e-06 53.5 71 45.1
FAN02G1830 Fragaria x ananassa HOM05D001527 ORTHO05D001492 8.3e-06 53.5 71 45.1
FAN09G3989 Fragaria x ananassa HOM05D001527 ORTHO05D001492 8.3e-06 53.5 71 45.1
FAN14G3714 Fragaria x ananassa HOM05D001527 ORTHO05D001492 8.3e-06 53.5 71 45.1
RcHm_v2.0_Chr5g0019531 Rosa chinensis HOM05D001527 ORTHO05D001492 8.3e-06 53.5 71 50.7


User provided reference genes

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