Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07174 Corchorus olitorius HOM05D006911 ORTHO05D006663 8.0e-35 149.8 73 100.0
Thecc.01G170800 Theobroma cacao HOM05D006911 ORTHO05D006663 1.6e-27 125.6 70 91.4
Manes.07G101802 Manihot esculenta HOM05D006911 ORTHO05D006663 3.7e-24 114.4 70 74.3
Duzib133G0070 Durio zibethinus HOM05D006911 ORTHO05D006663 6.3e-24 113.6 70 87.1
Potri.005G203800 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.5e-20 102.4 71 70.4
Potri.002G058400 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.4e-18 95.9 71 67.6
Ciclev10033778m.g Citrus clementina HOM05D006911 ORTHO05D006663 6.8e-18 93.6 76 61.8
Gohir.D11G163600 Gossypium hirsutum HOM05D006911 ORTHO05D006663 4.4e-17 90.9 71 73.2
Gorai.007G174300 Gossypium raimondii HOM05D006911 ORTHO05D006663 4.4e-17 90.9 71 73.2
Gohir.A11G156500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 7.5e-17 90.1 71 73.2
FvH4_6g38520 Fragaria vesca HOM05D006911 ORTHO05D006663 2.2e-16 88.6 71 64.8
FAN02G1638 Fragaria x ananassa HOM05D006911 ORTHO05D006663 2.2e-16 88.6 71 64.8
FAN14G5866 Fragaria x ananassa HOM05D006911 ORTHO05D006663 2.2e-16 88.6 71 64.8
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 2.8e-16 88.2 70 60.0
MD17G1137200 Malus domestica HOM05D006911 ORTHO05D006663 4.9e-16 87.4 72 66.7
Prupe.3G175200 Prunus persica HOM05D006911 ORTHO05D006663 6.3e-16 87.0 72 68.1
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 8.3e-16 86.7 73 58.9
QL08p044828 Quercus lobata HOM05D006911 ORTHO05D006663 1.1e-15 86.3 69 69.6
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 1.8e-15 85.5 69 60.9
MD09G1150000 Malus domestica HOM05D006911 ORTHO05D006663 2.4e-15 85.1 72 62.5
Cfa023065 Carpinus fangiana HOM05D006911 ORTHO05D006663 3.2e-15 84.7 70 65.7
Haze_13522 Corylus avellana HOM05D006911 ORTHO05D006663 3.2e-15 84.7 70 65.7
RcHm_v2.0_Chr2g0151771 Rosa chinensis HOM05D006911 ORTHO05D006663 3.2e-15 84.7 69 60.9
QL05p059038 Quercus lobata HOM05D006911 ORTHO05D006663 1.6e-14 82.4 55 65.5
THA.LOC104800829 Tarenaya hassleriana HOM05D006911 ORTHO05D006663 2.0e-14 82.0 85 61.2
CiPaw.04G139200 Carya illinoinensis HOM05D006911 ORTHO05D006663 2.7e-14 81.6 67 62.7
CSS0014266 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 3.5e-14 81.3 72 62.5
CSS0033096 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 3.5e-14 81.3 72 62.5
Gohir.D05G152400 Gossypium hirsutum HOM05D006911 ORTHO05D006663 3.5e-14 81.3 73 57.5
COL.COLO4_38300 Corchorus olitorius HOM05D006911 ORTHO05D006663 7.8e-14 80.1 71 57.7
Potri.004G131200 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.0e-13 79.7 72 50.0
Gohir.A05G149800 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.3e-13 79.3 73 56.2
Manes.10G042300 Manihot esculenta HOM05D006911 ORTHO05D006663 2.3e-13 78.6 64 57.8
Cpa.g.sc50.102 Carica papaya HOM05D006911 ORTHO05D006663 5.0e-13 77.4 70 64.3
COL.COLO4_24713 Corchorus olitorius HOM05D006911 ORTHO05D006663 5.0e-13 77.4 71 53.5
Potri.011G079900 Populus trichocarpa HOM05D006911 ORTHO05D006663 6.6e-13 77.0 69 53.6
Medtr5g091310 Medicago truncatula HOM05D006911 ORTHO05D006663 8.6e-13 76.6 78 53.8
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.5e-12 75.1 72 54.2
Sp1g05240 Schrenkiella parvula HOM05D006911 ORTHO05D006663 2.5e-12 75.1 79 53.2
TWI14G1424 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 3.3e-12 74.7 73 57.5
Gohir.D10G040100 Gossypium hirsutum HOM05D006911 ORTHO05D006663 4.3e-12 74.3 72 52.8
Gorai.011G042200 Gossypium raimondii HOM05D006911 ORTHO05D006663 4.3e-12 74.3 72 52.8
Gorai.009G156500 Gossypium raimondii HOM05D006911 ORTHO05D006663 7.3e-12 73.6 69 55.1
Thhalv10009210m.g Eutrema salsugineum HOM05D006911 ORTHO05D006663 1.2e-11 72.8 50 72.0
LjContig00049g0014504 Lotus japonicus HOM05D006911 ORTHO05D006663 1.2e-11 72.8 73 53.4
Sed0027001 Sechium edule HOM05D006911 ORTHO05D006663 1.6e-11 72.4 74 55.4
Glyma.14G029400 Glycine max HOM05D006911 ORTHO05D006663 2.8e-11 71.6 73 53.4
Gohir.A06G197500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.8e-11 71.6 75 53.3
arahy.Tifrunner.gnm1.ann1.A53T08 Arachis hypogaea HOM05D006911 ORTHO05D006663 3.6e-11 71.2 74 56.8
MBI10_g27413_MAGBIO Magnolia biondii HOM05D006911 ORTHO05D006663 3.6e-11 71.2 70 50.0
arahy.Tifrunner.gnm1.ann1.M9VZ51 Arachis hypogaea HOM05D006911 ORTHO05D006663 4.7e-11 70.9 74 56.8
C05p04730 Brassica napus HOM05D006911 ORTHO05D006663 6.1e-11 70.5 77 53.2
BolC5t29245H Brassica oleracea HOM05D006911 ORTHO05D006663 6.1e-11 70.5 77 53.2
Gohir.D06G205000 Gossypium hirsutum HOM05D006911 ORTHO05D006663 6.1e-11 70.5 75 52.0
AL1G16490 Arabidopsis lyrata HOM05D006911 ORTHO05D006663 8.0e-11 70.1 51 68.6
BraA10t42779Z Brassica rapa HOM05D006911 ORTHO05D006663 8.0e-11 70.1 50 68.0
Manes.15G119700 Manihot esculenta HOM05D006911 ORTHO05D006663 8.0e-11 70.1 50 62.0
Carub.0001s0584 Capsella rubella HOM05D006911 ORTHO05D006663 1.0e-10 69.7 52 67.3
BcaB02g06798 Brassica carinata HOM05D006911 ORTHO05D006663 1.4e-10 69.3 50 68.0
Gorai.010G239100 Gossypium raimondii HOM05D006911 ORTHO05D006663 1.4e-10 69.3 75 52.0
TWI09G0032 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 1.8e-10 68.9 73 45.2
CARHR006090 Cardamine hirsuta HOM05D006911 ORTHO05D006663 4.0e-10 67.8 54 63.0
CiPaw.09G126200 Carya illinoinensis HOM05D006911 ORTHO05D006663 8.9e-10 66.6 74 51.4
CSS0032663 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.2e-09 66.2 52 53.8
Eucgr.A02012 Eucalyptus grandis HOM05D006911 ORTHO05D006663 1.2e-09 66.2 89 44.9
AT1G06475 Arabidopsis thaliana HOM05D006911 ORTHO05D006663 1.5e-09 65.9 46 71.7
Manes.17G067900 Manihot esculenta HOM05D006911 ORTHO05D006663 1.5e-09 65.9 47 63.8
Phvul.006G031600 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 1.5e-09 65.9 74 50.0
Lalb_Chr04g0248851 Lupinus albus HOM05D006911 ORTHO05D006663 2.6e-09 65.1 66 51.5
Hma1.2p1_0137F.1_g062460 Hydrangea macrophylla HOM05D006911 ORTHO05D006663 3.4e-09 64.7 52 63.5
Glyma.08G308500 Glycine max HOM05D006911 ORTHO05D006663 9.8e-09 63.2 77 51.9
Ciclev10017350m.g Citrus clementina HOM05D006911 ORTHO05D006663 1.7e-08 62.4 69 46.4
Phvul.008G193200 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 1.7e-08 62.4 58 55.2
ClCG03G007000 Citrullus lanatus HOM05D006911 ORTHO05D006663 3.7e-08 61.2 72 44.4
Migut.M00927 Erythranthe guttata HOM05D006911 ORTHO05D006663 3.7e-08 61.2 61 47.5
RcHm_v2.0_Chr7g0229651 Rosa chinensis HOM05D006911 ORTHO05D006663 3.7e-08 61.2 72 47.2
PGR083G1670 Punica granatum HOM05D006911 ORTHO05D006663 6.4e-08 60.5 71 49.3
RcHm_v2.0_Chr5g0013541 Rosa chinensis HOM05D006911 ORTHO05D006663 6.4e-08 60.5 72 45.8
SalBow6G3836 Salvia bowleyana HOM05D006911 ORTHO05D006663 6.4e-08 60.5 52 55.8
TPR.G4919 Trifolium pratense HOM05D006911 ORTHO05D006663 8.3e-08 60.1 52 51.9
Glyma.08G083800 Glycine max HOM05D006911 ORTHO05D006663 1.1e-07 59.7 74 44.6
Oeu052383.1 Olea europaea HOM05D006911 ORTHO05D006663 1.1e-07 59.7 57 47.4
Lj6g0027673 Lotus japonicus HOM05D006911 ORTHO05D006663 1.9e-07 58.9 74 50.0
FAN21G0769 Fragaria x ananassa HOM05D006911 ORTHO05D006663 2.4e-07 58.5 69 46.4
SalBow7G2931 Salvia bowleyana HOM05D006911 ORTHO05D006663 2.4e-07 58.5 52 53.8
Aa31LG1G7540 Aethionema arabicum HOM05D006911 ORTHO05D006663 3.2e-07 58.2 34 79.4
Migut.H01374 Erythranthe guttata HOM05D006911 ORTHO05D006663 5.4e-07 57.4 49 55.1
Lsat_1_v5_gn_1_96620 Lactuca sativa HOM05D006911 ORTHO05D006663 5.4e-07 57.4 65 46.2
Cc09_g08880 Coffea canephora HOM05D006911 ORTHO05D006663 9.2e-07 56.6 56 48.2
MD05G1287000 Malus domestica HOM05D006911 ORTHO05D006663 9.2e-07 56.6 70 40.0
Nitab4.5_0001040g0170 Nicotiana tabacum HOM05D024954 ORTHO05D006663 9.2e-07 56.6 58 51.7
Sed0000672 Sechium edule HOM05D006911 ORTHO05D006663 1.6e-06 55.8 68 45.6
ATR0585G110 Amborella trichopoda HOM05D006911 ORTHO05D006663 2.0e-06 55.5 67 41.8
Lj4g0007682 Lotus japonicus HOM05D006911 ORTHO05D006663 2.0e-06 55.5 48 60.4
Lalb_Chr10g0106611 Lupinus albus HOM05D006911 ORTHO05D006663 2.0e-06 55.5 67 43.3
FvH4_3g05900 Fragaria vesca HOM05D006911 ORTHO05D006663 2.7e-06 55.1 68 45.6
Lsat_1_v5_gn_7_7541 Lactuca sativa HOM05D006911 ORTHO05D006663 2.7e-06 55.1 79 45.6
Prupe.4G077900 Prunus persica HOM05D006911 ORTHO05D006663 2.7e-06 55.1 70 38.6
Medtr4g094630 Medicago truncatula HOM05D006911 ORTHO05D006663 3.5e-06 54.7 73 46.6
HPP92_024568 Vanilla planifolia HOM05D006911 ORTHO05D006663 3.5e-06 54.7 50 50.0
Sed0015743 Sechium edule HOM05D006911 ORTHO05D006663 4.6e-06 54.3 68 45.6
Aqoxy6G00602 Aquilegia oxysepala HOM05D006911 ORTHO05D006663 6.0e-06 53.9 67 46.3
THA.LOC104806122 Tarenaya hassleriana HOM05D010376 ORTHO05D006663 6.0e-06 53.9 61 44.3


User provided reference genes

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