Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 4.0e-112 408.3 237 100.0
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 1.7e-86 323.2 226 76.5
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 6.7e-83 311.2 225 74.2
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 4.4e-74 282.0 224 74.6
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 7.2e-61 238.0 228 61.8
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 3.6e-60 235.7 228 61.8
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 6.3e-57 224.9 241 53.9
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 3.8e-54 215.7 228 57.5
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.3e-53 212.6 229 59.8
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 3.3e-53 212.6 220 55.9
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.0e-51 207.6 224 54.0
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 1.4e-51 207.2 220 57.7
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.4e-51 207.2 219 53.0
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 3.0e-51 206.1 220 57.3
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 2.6e-50 203.0 219 53.4
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 4.4e-50 202.2 230 53.0
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 4.4e-50 202.2 220 50.9
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 9.8e-50 201.1 229 56.3
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 6.3e-49 198.4 220 54.1
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 6.3e-49 198.4 214 59.8
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.1e-48 197.6 221 56.1
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 1.1e-48 197.6 229 52.8
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.8e-48 196.8 218 54.1
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 9.2e-48 194.5 230 51.3
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.6e-47 193.7 214 52.3
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 5.9e-47 191.8 217 51.2
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 5.0e-46 188.7 198 52.0
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 8.6e-46 188.0 239 52.3
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 2.1e-44 183.3 171 60.2
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 4.7e-44 182.2 233 49.8
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.0e-43 181.0 226 51.8
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.0e-43 181.0 219 55.3
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.8e-43 180.3 214 48.6
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 2.3e-43 179.9 219 54.8
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 2.3e-43 179.9 218 48.6
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.8e-43 178.3 240 48.3
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 6.8e-43 178.3 231 49.4
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 1.5e-42 177.2 209 47.8
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.0e-42 176.8 240 47.9
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.4e-42 176.0 240 47.9
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 3.4e-42 176.0 221 47.5
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 9.8e-42 174.5 241 47.7
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 9.8e-42 174.5 240 47.1
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.3e-41 174.1 192 52.6
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.7e-41 173.7 241 47.7
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.2e-41 173.3 238 46.6
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.9e-41 172.2 214 49.5
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 6.4e-41 171.8 217 51.2
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 8.3e-41 171.4 195 48.7
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 1.9e-40 170.2 219 46.1
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.9e-40 170.2 227 49.8
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 3.2e-40 169.5 216 47.2
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.2e-39 167.5 225 53.3
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.0e-39 166.8 233 48.5
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 6.0e-39 165.2 214 45.3
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.0e-38 164.5 184 48.9
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 5.0e-38 162.2 251 47.0
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 5.0e-38 162.2 205 47.8
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.1e-37 161.0 205 47.3
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 1.5e-37 160.6 205 49.3
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 1.5e-37 160.6 195 50.8
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.5e-37 159.8 210 51.4
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 5.6e-37 158.7 217 47.9
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 2.8e-36 156.4 205 50.7
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 4.7e-36 155.6 215 46.0
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 6.2e-36 155.2 223 50.7
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 6.2e-36 155.2 215 47.4
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 8.0e-36 154.8 159 61.0
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.3e-35 153.3 226 46.9
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 2.0e-34 150.2 204 44.6
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 2.6e-34 149.8 132 60.6
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 4.4e-34 149.1 228 47.4
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 5.8e-34 148.7 162 54.3
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 7.5e-34 148.3 225 48.0
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 7.5e-34 148.3 216 46.3
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 8.3e-33 144.8 215 40.5
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.4e-32 143.3 220 47.7
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.2e-32 142.9 226 47.3
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.6e-31 140.6 216 49.5
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.3e-30 137.5 214 43.5
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 1.7e-30 137.1 235 43.0
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.7e-30 137.1 214 43.5
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 3.0e-30 136.3 214 41.6
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 1.1e-29 134.4 178 47.2
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.5e-29 134.0 232 39.2
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 2.8e-28 129.8 229 40.2
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 4.7e-28 129.0 229 39.7
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.7e-28 129.0 214 44.4
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 5.2e-27 125.6 106 62.3
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.6e-26 123.2 191 44.5
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 9.9e-26 121.3 176 50.6
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.1e-24 117.9 166 43.4
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.6e-23 114.0 211 40.8
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 2.7e-23 113.2 214 37.4
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 7.8e-23 111.7 167 45.5
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.0e-22 111.3 104 59.6
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 1.3e-22 110.9 215 40.9
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.7e-22 110.5 165 43.0
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 3.0e-22 109.8 215 40.9
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 3.0e-22 109.8 215 40.9
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 3.0e-22 109.8 180 45.0
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 6.6e-22 108.6 233 36.5
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.6e-21 105.5 210 43.8
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.3e-21 105.1 214 38.8
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 9.6e-21 104.8 98 57.1
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.6e-20 104.0 229 39.3
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.6e-20 104.0 225 42.7
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.6e-20 104.0 225 42.7
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.6e-20 104.0 225 42.7
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.6e-20 104.0 225 42.7
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 2.1e-20 103.6 225 41.3
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.1e-20 103.6 200 38.0
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 2.1e-20 103.6 224 45.5
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 2.8e-20 103.2 123 46.3
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 3.6e-20 102.8 215 40.0
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 6.2e-20 102.1 235 37.9
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 8.1e-20 101.7 157 49.7
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.4e-19 100.9 229 38.0
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 5.2e-19 99.0 212 40.1
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 6.8e-19 98.6 227 37.9
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.2e-18 97.8 197 37.6
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.0e-18 97.1 125 49.6
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 3.4e-18 96.3 129 48.1
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 3.8e-17 92.8 226 42.0
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.9e-17 92.4 143 47.6
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 2.4e-16 90.1 101 48.5
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 4.2e-16 89.4 223 31.8
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 5.4e-16 89.0 242 38.4
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 8.7e-14 81.6 138 39.9
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.1e-12 77.0 139 48.2
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 2.6e-10 70.1 123 38.2
ATR0088G022 Amborella trichopoda HOM05D005697 ORTHO05D006951 3.2e-08 63.2 131 32.1


User provided reference genes

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