Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_06914 Corchorus olitorius HOM05D004101 ORTHO05D005221 0.0e+00 1610.1 834 100.0
Thecc.08G177600 Theobroma cacao HOM05D004101 ORTHO05D005221 0.0e+00 1344.3 846 79.7
Duzib177G1024 Durio zibethinus HOM05D004101 ORTHO05D005221 0.0e+00 1317.0 896 75.4
Gorai.009G267200 Gossypium raimondii HOM05D004101 ORTHO05D005221 0.0e+00 1293.5 848 76.9
Gohir.A05G253700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 0.0e+00 1292.7 848 77.0
Gohir.A02G087700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 0.0e+00 1278.5 846 77.2
Gorai.005G116600 Gossypium raimondii HOM05D004101 ORTHO05D005221 0.0e+00 1277.3 846 77.2
Gohir.D02G102700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 0.0e+00 1166.4 769 77.4
Atru.chr13.2487 Acer truncatum HOM05D004101 ORTHO05D005221 0.0e+00 1154.0 860 69.4
Ciclev10018750m.g Citrus clementina HOM05D004101 ORTHO05D005221 0.0e+00 1153.7 853 69.6
QL09p002038 Quercus lobata HOM05D004101 ORTHO05D005221 0.0e+00 1151.0 860 68.8
CiPaw.03G015400 Carya illinoinensis HOM05D004101 ORTHO05D005221 0.0e+00 1129.0 857 68.0
Cfa008084 Carpinus fangiana HOM05D004101 ORTHO05D005221 0.0e+00 1128.6 861 68.5
GSVIVG01036377001 Vitis vinifera HOM05D004101 ORTHO05D005221 0.0e+00 1127.1 849 67.6
Manes.18G117901 Manihot esculenta HOM05D004101 ORTHO05D005221 0.0e+00 1117.4 874 68.4
Dinv05108 Davidia involucrata HOM05D004101 ORTHO05D005221 0.0e+00 1116.7 860 67.1
Potri.013G099700 Populus trichocarpa HOM05D004101 ORTHO05D005221 0.0e+00 1108.2 845 68.5
Manes.02G221381 Manihot esculenta HOM05D004101 ORTHO05D005221 0.0e+00 1104.7 861 67.9
Actinidia29382 Actinidia chinensis HOM05D004101 ORTHO05D005221 0.0e+00 1099.7 860 65.8
arahy.Tifrunner.gnm1.ann1.BP0NKM Arachis hypogaea HOM05D004101 ORTHO05D005221 0.0e+00 1097.4 840 67.0
Dinv36168 Davidia involucrata HOM05D004101 ORTHO05D005221 0.0e+00 1097.4 856 65.1
Potri.019G072300 Populus trichocarpa HOM05D004101 ORTHO05D005221 0.0e+00 1097.0 848 66.4
Atru.chr13.2501 Acer truncatum HOM05D004101 ORTHO05D005221 0.0e+00 1095.1 828 68.6
Lalb_Chr16g0391261 Lupinus albus HOM05D004101 ORTHO05D005221 0.0e+00 1089.7 839 66.2
TAR625G0099 Trochodendron aralioides HOM05D004101 ORTHO05D005221 0.0e+00 1089.3 868 65.4
CSS0023016 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 0.0e+00 1087.8 856 65.1
TWI18G0503 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 0.0e+00 1082.4 847 66.4
Ca_19680_v3 Cicer arietinum L. HOM05D004101 ORTHO05D005221 0.0e+00 1081.2 839 66.5
VMungo1127G2207 Vigna mungo HOM05D004101 ORTHO05D005221 0.0e+00 1080.5 849 65.7
TAR383G0434 Trochodendron aralioides HOM05D004101 ORTHO05D005221 0.0e+00 1080.1 868 64.7
Glyma.09G234500 Glycine max HOM05D004101 ORTHO05D005221 5.7e-312 1074.3 846 65.5
Lj3g0009901 Lotus japonicus HOM05D004101 ORTHO05D005221 5.1e-311 1070.8 839 64.4
Prupe.1G442600 Prunus persica HOM05D004101 ORTHO05D005221 1.5e-310 1069.3 851 66.2
PGR042G3616 Punica granatum HOM05D004101 ORTHO05D005221 3.3e-310 1068.1 863 65.0
Phvul.011G002700 Phaseolus vulgaris HOM05D004101 ORTHO05D005221 4.3e-310 1067.8 854 65.0
RcHm_v2.0_Chr6g0306901 Rosa chinensis HOM05D004101 ORTHO05D005221 1.8e-308 1062.4 846 66.2
Psat7g146680 Pisum sativum HOM05D004101 ORTHO05D005221 5.3e-308 1060.8 841 64.9
CSS0032109 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 1.2e-307 1059.7 849 64.7
arahy.Tifrunner.gnm1.ann1.FM3HJM Arachis hypogaea HOM05D004101 ORTHO05D005221 2.6e-307 1058.5 927 60.5
CANSAT78G1092 Cannabis sativa HOM05D004101 ORTHO05D005221 9.9e-307 1056.6 892 62.9
TWI12G0255 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 1.9e-305 1052.4 841 65.6
Medtr4g033490 Medicago truncatula HOM05D004101 ORTHO05D005221 1.2e-304 1049.7 862 63.5
Oeu028926.1 Olea europaea HOM05D004101 ORTHO05D005221 7.9e-304 1047.0 852 63.0
CsaV3_2G033160 Cucumis sativus L. HOM05D004101 ORTHO05D005221 1.0e-303 1046.6 850 64.6
Nn5g27278 Nelumbo nucifera HOM05D004101 ORTHO05D005221 1.1e-302 1043.1 858 64.0
MELO3C008088.2 Cucumis melo HOM05D004101 ORTHO05D005221 1.5e-302 1042.7 849 64.3
EL10Ac1g01668 Beta vulgaris HOM05D004101 ORTHO05D005221 1.6e-301 1039.3 880 60.9
ClCG11G008940 Citrullus lanatus HOM05D004101 ORTHO05D005221 2.1e-301 1038.9 857 64.6
Aa31LG2G14460 Aethionema arabicum HOM05D004101 ORTHO05D005221 1.1e-300 1036.6 866 63.3
MD15G1088500 Malus domestica HOM05D004101 ORTHO05D005221 2.6e-299 1031.9 841 64.3
MSTRG.12725 Avicennia marina HOM05D004101 ORTHO05D005221 3.4e-299 1031.6 848 63.2
Sabra13G0085500 Salix brachista HOM05D004101 ORTHO05D005221 2.9e-298 1028.5 925 60.5
Sed0018643 Sechium edule HOM05D004101 ORTHO05D005221 3.8e-298 1028.1 840 64.3
MD08G1108000 Malus domestica HOM05D004101 ORTHO05D005221 4.9e-298 1027.7 849 64.1
Solyc01g008320.3 Solanum lycopersicum HOM05D004101 ORTHO05D005221 5.5e-297 1024.2 852 62.2
AT1G31480 Arabidopsis thaliana HOM05D004101 ORTHO05D005221 9.3e-297 1023.5 848 62.5
AL1G49570 Arabidopsis lyrata HOM05D004101 ORTHO05D005221 1.8e-295 1019.2 851 62.4
Thhalv10006721m.g Eutrema salsugineum HOM05D004101 ORTHO05D005221 3.0e-295 1018.5 862 64.0
Sopen01g003840 Solanum pennellii HOM05D004101 ORTHO05D005221 3.0e-295 1018.5 850 62.0
Sp1g27280 Schrenkiella parvula HOM05D004101 ORTHO05D005221 3.9e-295 1018.1 853 62.5
CARHR287040 Cardamine hirsuta HOM05D004101 ORTHO05D005221 6.7e-295 1017.3 851 62.6
Carub.0001s2990 Capsella rubella HOM05D004101 ORTHO05D005221 2.5e-294 1015.4 865 61.8
C05p30730 Brassica napus HOM05D004101 ORTHO05D005221 9.7e-294 1013.4 851 63.1
FvH4_2g35070 Fragaria vesca HOM05D004101 ORTHO05D005221 2.2e-293 1012.3 853 63.4
BcaC07g37755 Brassica carinata HOM05D004101 ORTHO05D005221 1.1e-292 1010.0 850 64.0
BolC8t48140H Brassica oleracea HOM05D004101 ORTHO05D005221 1.1e-292 1010.0 850 64.0
BraA08t33053Z Brassica rapa HOM05D004101 ORTHO05D005221 2.4e-292 1008.8 856 63.6
Haze_13953 Corylus avellana HOM05D004101 ORTHO05D005221 2.4e-292 1008.8 942 59.2
BcaC05g27176 Brassica carinata HOM05D004101 ORTHO05D005221 4.1e-292 1008.1 851 62.9
BolC5t31805H Brassica oleracea HOM05D004101 ORTHO05D005221 4.1e-292 1008.1 851 62.9
SGA_v2.0_scaffold120G33012 Striga asiatica HOM05D004101 ORTHO05D005221 6.9e-292 1007.3 877 60.1
A08p10530 Brassica napus HOM05D004101 ORTHO05D005221 2.0e-291 1005.7 857 63.6
BcaB07g32808 Brassica carinata HOM05D004101 ORTHO05D005221 1.7e-290 1002.7 860 61.2
CANSAT21G1017 Cannabis sativa HOM05D004101 ORTHO05D005221 5.0e-290 1001.1 811 63.9
SalBow2G0849 Salvia bowleyana HOM05D004101 ORTHO05D005221 6.5e-290 1000.7 896 59.9
Atru.chr13.2489 Acer truncatum HOM05D004101 ORTHO05D005221 8.5e-290 1000.3 859 62.5
Aqoxy6G01398 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 1.1e-289 1000.0 913 59.4
BraA09t39007Z Brassica rapa HOM05D004101 ORTHO05D005221 1.4e-289 999.6 851 62.0
Aqoxy6G00101 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 1.9e-289 999.2 913 59.3
Aqoxy2G02197 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 7.2e-289 997.3 913 59.4
Aa31LG9G15840 Aethionema arabicum HOM05D004101 ORTHO05D005221 3.9e-287 991.5 849 60.9
FAN27G2707 Fragaria x ananassa HOM05D004101 ORTHO05D005221 7.4e-286 987.3 860 62.1
Cc10_g08720 Coffea canephora HOM05D004101 ORTHO05D005221 1.7e-285 986.1 889 59.4
HanXRQChr03g0062111 Helianthus annuus HOM05D004101 ORTHO05D005221 3.7e-285 984.9 838 60.7
Eucgr.F02954 Eucalyptus grandis HOM05D004101 ORTHO05D005221 1.0e-282 976.9 845 60.9
ECA234G0584 Erigeron canadensis HOM05D004101 ORTHO05D005221 1.3e-282 976.5 842 60.1
ATR1089G044 Amborella trichopoda HOM05D004101 ORTHO05D005221 2.2e-282 975.7 876 59.7
PSO017G3151 Papaver somniferum HOM05D004101 ORTHO05D005221 5.0e-282 974.5 870 61.4
CAN.G282.41 Capsicum annuum HOM05D004101 ORTHO05D005221 9.4e-281 970.3 869 58.7
Sabra19G0083800 Salix brachista HOM05D004101 ORTHO05D005221 1.2e-280 969.9 973 55.7
SGA_v2.0_scaffold158G37476 Striga asiatica HOM05D004101 ORTHO05D005221 4.7e-280 968.0 883 59.0
Migut.D00784 Erythranthe guttata HOM05D004101 ORTHO05D005221 1.1e-278 963.4 852 60.3
FAN20G0554 Fragaria x ananassa HOM05D004101 ORTHO05D005221 4.4e-278 961.4 847 61.0
PSO170G4791 Papaver somniferum HOM05D004101 ORTHO05D005221 9.7e-278 960.3 837 59.7
DCAR_019079 Daucus carota HOM05D004101 ORTHO05D005221 4.8e-277 958.0 977 53.4
ECA240G3381 Erigeron canadensis HOM05D004101 ORTHO05D005221 2.4e-276 955.7 855 58.1
PSO017G5679 Papaver somniferum HOM05D004101 ORTHO05D005221 2.6e-275 952.2 818 61.1
PSO170G4509 Papaver somniferum HOM05D004101 ORTHO05D005221 4.5e-275 951.4 812 61.0
Lj9A698G58 Lonicera japonica HOM05D004101 ORTHO05D005221 2.2e-266 922.5 860 59.3
Lsat_1_v5_gn_7_42860 Lactuca sativa HOM05D004101 ORTHO05D005221 3.2e-265 918.7 831 57.0
Os08g0110700 Oryza sativa ssp. japonica HOM05D004101 ORTHO05D005221 1.2e-264 916.8 853 57.8
Peaxi162Scf00021g02415 Petunia axillaris HOM05D004101 ORTHO05D005221 8.0e-264 914.1 855 57.5
Zm00001eb174090 Zea mays HOM05D004101 ORTHO05D005221 1.2e-262 910.2 882 55.9
HPP92_008596 Vanilla planifolia HOM05D004101 ORTHO05D005221 2.2e-261 906.0 970 53.3
Nitab4.5_0000069g0130 Nicotiana tabacum HOM05D004101 ORTHO05D005221 1.3e-258 896.7 786 60.3
AUR62022357 Chenopodium quinoa HOM05D004101 ORTHO05D005221 1.7e-258 896.3 879 55.9
AUR62034351 Chenopodium quinoa HOM05D004101 ORTHO05D005221 1.1e-257 893.6 875 56.0
Hund26650 Selenicereus undatus HOM05D004101 ORTHO05D005221 1.1e-257 893.6 1094 48.7
Zm00001eb260480 Zea mays HOM05D004101 ORTHO05D005221 4.2e-257 891.7 869 55.1
BcaB04g18153 Brassica carinata HOM05D004101 ORTHO05D005221 9.4e-257 890.6 755 61.3
Sc26g0002190 Simmondsia chinensis HOM05D004101 ORTHO05D005221 2.6e-254 882.5 737 66.5
Gohir.D05G255640 Gossypium hirsutum HOM05D004101 ORTHO05D005221 3.4e-254 882.1 598 75.6
FAN15G3699 Fragaria x ananassa HOM05D004101 ORTHO05D005221 3.8e-250 868.6 844 57.3
Ah.07g205660 Amaranthus hybridus HOM05D004101 ORTHO05D005221 3.4e-246 855.5 926 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4088 Anthoceros agrestis HOM05D004101 ORTHO05D005221 1.1e-231 807.4 820 51.5
Mapoly0151s0040 Marchantia polymorpha HOM05D004101 ORTHO05D005221 2.2e-229 799.7 920 47.7
THA.LOC104812717 Tarenaya hassleriana HOM05D004101 ORTHO05D005221 1.4e-228 797.0 677 62.0
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 3.6e-224 782.3 845 51.0
SMO200G0043 Selaginella moellendorffii HOM05D004101 ORTHO05D005221 4.4e-222 775.4 789 52.2
Pp3c3_10170 Physcomitrium patens HOM05D004101 ORTHO05D005221 7.6e-214 748.0 1016 43.2
Nitab4.5_0009427g0010 Nicotiana tabacum HOM05D004101 ORTHO05D005221 2.3e-210 736.5 716 55.6
TPR.G31924 Trifolium pratense HOM05D004101 ORTHO05D005221 2.3e-202 709.9 622 59.3
A09p34710 Brassica napus HOM05D004101 ORTHO05D005221 4.0e-199 699.1 667 57.7
CDE02G0702 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 8.2e-184 648.3 621 58.6
Rhsim08G0116000 Rhododendron simsii HOM05D004101 ORTHO05D005221 1.4e-180 637.5 753 49.1
Gohir.D05G255660 Gossypium hirsutum HOM05D004101 ORTHO05D005221 6.5e-165 585.5 469 66.3
Migut.N00698 Erythranthe guttata HOM05D004101 ORTHO05D005221 7.7e-158 562.0 334 82.0
Cpa.g.sc24.82 Carica papaya HOM05D004101 ORTHO05D005221 2.1e-139 500.7 484 58.1
Lj2A387G43 Lonicera japonica HOM05D004101 ORTHO05D005221 1.2e-131 474.9 619 46.7
vmacro14428 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 1.4e-127 461.5 279 79.9
vmacro17836 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 1.8e-127 461.1 711 41.8
HPP92_008552 Vanilla planifolia HOM05D004101 ORTHO05D005221 3.0e-125 453.8 554 48.2
vmacro17837 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 3.6e-123 446.8 325 70.8
Lj2A387T50 Lonicera japonica HOM05D004101 ORTHO05D005221 2.0e-121 441.0 293 75.4
Migut.N00699 Erythranthe guttata HOM05D004101 ORTHO05D005221 3.9e-109 400.2 275 69.5
CBR_g19663 Chara braunii HOM05D004101 ORTHO05D005221 2.9e-96 357.5 326 56.7
Oeu006618.1 Olea europaea HOM05D004101 ORTHO05D005221 1.1e-90 339.0 205 78.5
HPP92_008553 Vanilla planifolia HOM05D004101 ORTHO05D005221 1.3e-88 332.0 225 73.3
Lsat_1_v5_gn_5_98501 Lactuca sativa HOM05D004101 ORTHO05D007752 2.7e-86 324.3 212 73.1
Cpa.g.sc24.85 Carica papaya HOM05D004101 ORTHO05D005221 7.2e-55 219.9 131 80.2
vmacro14430 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 2.8e-51 208.0 139 69.8
QL93p1879_0034 Quercus lobata HOM05D004101 ORTHO05D005221 1.2e-49 202.6 130 76.2
CDE02G4445 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 2.9e-48 198.0 213 52.1
Aqoxy2G00645 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 3.1e-34 151.4 163 47.2
SEGI_18218 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 4.7e-30 137.5 76 85.5
PSO017G1167 Papaver somniferum HOM05D004101 ORTHO05D005221 8.0e-30 136.7 111 59.5
SEGI_38945 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 2.2e-24 118.6 86 62.8
vmacro14429 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 8.0e-22 110.2 58 82.8
Cpa.g.sc24.79 Carica papaya HOM05D004101 ORTHO05D005221 1.1e-18 99.8 66 72.7
BcaB04g18154 Brassica carinata HOM05D004101 ORTHO05D005221 9.2e-18 96.7 79 68.4
BolC1t03898H Brassica oleracea HOM05D010251 ORTHO05D005221 2.9e-16 91.7 160 38.1
SMO200G0098 Selaginella moellendorffii HOM05D004101 ORTHO05D037556 1.0e-13 83.2 82 54.9
Pp3c3_10160 Physcomitrium patens HOM05D004101 ORTHO05D005221 2.9e-11 75.1 94 39.4
Lsat_1_v5_gn_5_153621 Lactuca sativa HOM05D004101 ORTHO05D005221 1.4e-10 72.8 68 51.5
SMO200G0135 Selaginella moellendorffii HOM05D004101 ORTHO05D037556 5.9e-09 67.4 62 54.8
A09p34730 Brassica napus HOM05D004101 ORTHO05D005221 7.8e-09 67.0 63 58.7
BolC2t10203H Brassica oleracea HOM05D004101 ORTHO05D027158 1.3e-08 66.2 53 56.6
BolC2t10210H Brassica oleracea HOM05D004101 ORTHO05D027158 1.3e-08 66.2 53 56.6
Os07g0406600 Oryza sativa ssp. japonica HOM05D004101 ORTHO05D005221 1.3e-08 66.2 40 70.0
A01p24750 Brassica napus HOM05D004101 ORTHO05D027158 1.7e-08 65.9 53 56.6
VMungo0251G0072 Vigna mungo HOM05D004101 ORTHO05D005221 1.9e-07 62.4 35 71.4
BcaC05g27051 Brassica carinata HOM05D004101 ORTHO05D027158 4.3e-07 61.2 146 32.9
SMO209G0008 Selaginella moellendorffii HOM05D004101 ORTHO05D037556 4.3e-07 61.2 52 59.6
CDE08G1083 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 4.7e-06 57.8 72 50.0


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