Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 3.0e-82 308.5 163 100.0
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 8.8e-50 200.7 167 72.5
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 2.8e-48 195.7 156 75.0
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 4.1e-47 191.8 158 74.7
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 6.8e-42 174.5 161 67.7
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 7.5e-41 171.0 169 65.1
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 2.8e-40 169.1 161 67.1
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 2.0e-30 136.3 138 65.2
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 1.7e-29 133.3 148 59.5
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.5e-28 130.2 117 60.7
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 9.5e-28 127.5 117 59.8
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 9.5e-28 127.5 117 59.8
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 1.8e-26 123.2 167 53.3
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 4.4e-25 118.6 115 62.6
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 1.7e-24 116.7 121 57.9
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 1.4e-23 113.6 115 59.1
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 4.1e-23 112.1 125 56.8
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 7.0e-23 111.3 122 56.6
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 2.9e-21 105.9 130 54.6
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 3.3e-20 102.4 121 53.7
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.6e-19 100.1 128 50.8
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 2.8e-19 99.4 125 52.8
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 3.1e-18 95.9 157 45.9
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.5e-17 93.6 116 50.0
Gorai.008G127500 Gossypium raimondii HOM05D007199 ORTHO05D007257 9.8e-17 90.9 128 50.8
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.3e-16 90.5 138 43.5
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 1.7e-16 90.1 132 50.0
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 1.7e-16 90.1 114 45.6
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 1.7e-16 90.1 114 45.6
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 2.9e-16 89.4 92 53.3
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 3.7e-16 89.0 106 50.9
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 4.9e-16 88.6 169 41.4
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 8.3e-16 87.8 128 52.3
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 1.1e-15 87.4 127 41.7
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.4e-15 87.0 122 45.9
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 1.4e-15 87.0 126 42.1
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 1.9e-15 86.7 131 45.0
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 1.9e-15 86.7 97 45.4
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.4e-15 86.3 145 44.1
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 3.2e-15 85.9 126 39.7
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 3.2e-15 85.9 114 50.0
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 4.1e-15 85.5 156 46.2
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 5.4e-15 85.1 109 45.0
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 5.4e-15 85.1 100 49.0
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 7.0e-15 84.7 139 41.7
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 1.2e-14 84.0 126 45.2
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 1.2e-14 84.0 131 42.7
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.2e-14 84.0 130 42.3
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 1.2e-14 84.0 126 47.6
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 1.6e-14 83.6 136 37.5
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 2.0e-14 83.2 129 44.2
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 2.7e-14 82.8 145 44.1
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 4.6e-14 82.0 130 43.8
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 6.0e-14 81.6 89 50.6
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 1.3e-13 80.5 138 44.2
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 1.7e-13 80.1 132 41.7
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 2.3e-13 79.7 122 42.6
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 3.0e-13 79.3 160 38.8
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 5.0e-13 78.6 126 42.9
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 6.6e-13 78.2 171 41.5
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 6.6e-13 78.2 119 43.7
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 1.9e-12 76.6 122 43.4
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 2.5e-12 76.3 120 46.7
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 7.3e-12 74.7 115 44.3
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 7.3e-12 74.7 121 46.3
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 9.5e-12 74.3 86 47.7
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 9.5e-12 74.3 144 39.6
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.2e-11 73.9 136 39.7
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.2e-11 73.9 136 39.7
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 2.1e-11 73.2 126 40.5
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 2.8e-11 72.8 86 46.5
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 2.8e-11 72.8 159 39.6
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 3.6e-11 72.4 149 38.9
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 6.2e-11 71.6 136 39.0
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 1.1e-10 70.9 112 42.0
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 1.8e-10 70.1 107 43.0
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 1.8e-10 70.1 163 37.4
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.8e-10 70.1 163 37.4
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 4.0e-10 68.9 105 46.7
Cc02_g39760 Coffea canephora HOM05D007199 ORTHO05D007257 6.8e-10 68.2 139 40.3
AUR62033124 Chenopodium quinoa HOM05D021513 ORTHO05D007257 1.2e-09 67.4 88 45.5
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 1.5e-09 67.0 134 41.8
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.5e-09 67.0 145 36.6
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 3.4e-09 65.9 115 40.9
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 5.8e-09 65.1 83 49.4
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 5.8e-09 65.1 131 42.7
Nitab4.5_0000307g0150 Nicotiana tabacum HOM05D007199 ORTHO05D007257 7.5e-09 64.7 69 49.3
EL10Ac7g17504 Beta vulgaris HOM05D021513 ORTHO05D007257 1.7e-08 63.5 128 35.2
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 6.4e-08 61.6 70 52.9
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 1.1e-07 60.8 170 34.1
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 1.1e-07 60.8 140 37.1
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 4.1e-07 58.9 143 35.7
Nitab4.5_0000917g0050 Nicotiana tabacum HOM05D007199 ORTHO05D007257 4.1e-07 58.9 71 54.9
Hund16734 Selenicereus undatus HOM05D007199 ORTHO05D007257 9.2e-07 57.8 125 40.0
Sc23g0001940 Simmondsia chinensis HOM05D007199 ORTHO05D007257 9.2e-07 57.8 144 31.9
Oeu022158.1 Olea europaea HOM05D007199 ORTHO05D007257 1.6e-06 57.0 70 47.1
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 2.1e-06 56.6 156 32.1
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 2.1e-06 56.6 143 35.0
BcaC02g07047 Brassica carinata HOM05D012720 ORTHO05D007257 2.7e-06 56.2 153 34.0
PGR042G0368 Punica granatum HOM05D007199 ORTHO05D007257 4.6e-06 55.5 38 73.7
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 6.0e-06 55.1 137 32.8


User provided reference genes

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