Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 3.0e-40 167.9 78 100.0
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 2.2e-38 161.8 78 93.6
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 3.7e-38 161.0 78 93.6
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 8.2e-38 159.8 78 92.3
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 8.2e-38 159.8 78 92.3
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 1.1e-37 159.5 78 91.0
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 1.1e-37 159.5 78 91.0
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 2.4e-37 158.3 78 92.3
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 2.4e-37 158.3 78 92.3
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 2.4e-37 158.3 78 91.0
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 9.1e-37 156.4 78 89.7
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 1.2e-36 156.0 78 89.7
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 1.2e-36 156.0 78 91.0
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 1.2e-36 156.0 78 91.0
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 1.2e-36 156.0 77 89.6
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 1.6e-36 155.6 77 88.3
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 1.6e-36 155.6 77 88.3
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 2.0e-36 155.2 77 90.9
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 2.6e-36 154.8 78 87.2
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 2.6e-36 154.8 78 88.5
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 5.9e-36 153.7 78 84.6
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 7.7e-36 153.3 78 88.5
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 7.7e-36 153.3 78 87.2
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 1.7e-35 152.1 78 87.2
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 3.8e-35 151.0 78 87.2
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 5.0e-35 150.6 78 85.9
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 6.5e-35 150.2 78 91.0
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 6.5e-35 150.2 78 91.0
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 8.5e-35 149.8 78 88.5
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 8.5e-35 149.8 78 85.9
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 1.1e-34 149.4 78 84.6
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 1.5e-34 149.1 78 84.6
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 1.5e-34 149.1 77 85.7
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 4.2e-34 147.5 71 90.1
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 4.2e-34 147.5 71 90.1
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 7.2e-34 146.7 72 87.5
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 9.4e-34 146.4 78 85.9
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 1.2e-33 146.0 79 84.8
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 1.6e-33 145.6 78 84.6
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 1.6e-33 145.6 72 91.7
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 2.7e-33 144.8 68 92.6
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 3.6e-33 144.4 68 94.1
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 4.7e-33 144.1 78 84.6
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 6.1e-33 143.7 78 84.6
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 6.1e-33 143.7 78 83.3
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 8.0e-33 143.3 67 95.5
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 8.0e-33 143.3 67 95.5
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 8.0e-33 143.3 72 91.7
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 1.0e-32 142.9 71 87.3
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 1.0e-32 142.9 78 87.2
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 1.4e-32 142.5 72 88.9
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 1.8e-32 142.1 73 83.6
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 1.8e-32 142.1 78 84.6
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 2.3e-32 141.7 72 87.5
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 3.0e-32 141.4 78 83.3
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 3.0e-32 141.4 68 91.2
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 3.0e-32 141.4 77 87.0
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 4.0e-32 141.0 77 85.7
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 5.2e-32 140.6 67 92.5
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 5.2e-32 140.6 67 92.5
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 5.2e-32 140.6 78 82.1
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 5.2e-32 140.6 78 83.3
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 6.8e-32 140.2 72 86.1
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 6.8e-32 140.2 78 82.1
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 6.8e-32 140.2 70 85.7
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 8.8e-32 139.8 78 79.5
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 8.8e-32 139.8 78 80.8
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 8.8e-32 139.8 78 80.8
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 8.8e-32 139.8 78 82.1
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 1.2e-31 139.4 78 80.8
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 1.2e-31 139.4 78 80.8
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 1.2e-31 139.4 78 80.8
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 1.2e-31 139.4 78 79.5
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 1.2e-31 139.4 78 79.5
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 1.2e-31 139.4 78 80.8
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 1.5e-31 139.0 78 79.5
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 1.5e-31 139.0 78 79.5
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 1.5e-31 139.0 78 79.5
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 1.5e-31 139.0 73 84.9
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 2.6e-31 138.3 78 79.5
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 2.6e-31 138.3 69 85.5
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 2.6e-31 138.3 67 89.6
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 2.6e-31 138.3 78 78.2
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 3.4e-31 137.9 78 79.5
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 3.4e-31 137.9 78 79.5
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 3.4e-31 137.9 68 88.2
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 4.4e-31 137.5 77 79.2
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 4.4e-31 137.5 78 82.1
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 7.5e-31 136.7 71 85.9
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 9.8e-31 136.3 78 78.2
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 9.8e-31 136.3 78 78.2
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 9.8e-31 136.3 79 82.3
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 9.8e-31 136.3 78 80.8
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 1.7e-30 135.6 78 76.9
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 1.7e-30 135.6 72 81.9
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 2.2e-30 135.2 80 80.0
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 2.2e-30 135.2 78 79.5
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 2.2e-30 135.2 78 79.5
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 2.2e-30 135.2 78 76.9
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.2e-30 135.2 76 77.6
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 2.2e-30 135.2 73 83.6
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 2.8e-30 134.8 75 77.3
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 2.8e-30 134.8 76 77.6
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 4.8e-30 134.0 78 78.2
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 4.8e-30 134.0 78 78.2
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 4.8e-30 134.0 78 78.2
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 6.3e-30 133.7 78 79.5
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 6.3e-30 133.7 78 79.5
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 6.3e-30 133.7 76 78.9
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 8.3e-30 133.3 78 78.2
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 8.3e-30 133.3 68 85.3
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 8.3e-30 133.3 67 89.6
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 8.3e-30 133.3 72 83.3
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 1.1e-29 132.9 76 78.9
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 1.8e-29 132.1 79 79.7
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.8e-29 132.1 79 79.7
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.8e-29 132.1 79 79.7
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.8e-29 132.1 79 79.7
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.8e-29 132.1 79 79.7
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 2.4e-29 131.7 78 78.2
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 2.4e-29 131.7 72 81.9
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 3.1e-29 131.3 66 87.9
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 3.1e-29 131.3 72 79.2
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 3.1e-29 131.3 73 82.2
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 4.1e-29 131.0 66 86.4
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 4.1e-29 131.0 72 77.8
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 9.1e-29 129.8 78 76.9
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 1.6e-28 129.0 78 76.9
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 1.6e-28 129.0 78 76.9
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 5.9e-28 127.1 67 83.6
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 1.0e-27 126.3 75 74.7
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 1.0e-27 126.3 68 79.4
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 1.3e-27 125.9 74 74.3
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 8.5e-27 123.2 67 79.1
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.1e-26 122.9 69 79.7
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 5.5e-26 120.6 65 78.5
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 2.4e-21 105.1 56 82.1
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 4.5e-20 100.9 59 76.3
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 3.0e-16 88.2 76 59.2
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 1.2e-15 86.3 62 64.5
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 1.5e-15 85.9 64 60.9
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 2.6e-15 85.1 64 60.9
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 5.7e-15 84.0 60 65.0
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 5.7e-15 84.0 58 63.8
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 9.8e-15 83.2 45 84.4
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 1.3e-14 82.8 45 77.8
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 4.1e-13 77.8 45 80.0
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 2.0e-12 75.5 38 86.8
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 2.0e-12 75.5 41 80.5
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 4.6e-12 74.3 59 55.9
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 2.9e-11 71.6 41 75.6
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 1.5e-10 69.3 77 42.9
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 1.7e-06 55.8 65 41.5


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